RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 RGPD3A6NKT7 1758 aaPredicted RBP14.15□□□□□ -0.14
LINC00661-207ENST00000552685 RGPD4Q7Z3J3 1758 aa14.15□□□□□ -0.14
LINC00661-207ENST00000552685 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
LINC00661-207ENST00000552685 KTN1Q86UP2 1357 aaKnown RBP14.14□□□□□ -0.15
LINC00661-207ENST00000552685 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
LINC00661-207ENST00000552685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00661-207ENST00000552685 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
LINC00661-207ENST00000552685 DDB1Q16531 1140 aa14.13□□□□□ -0.15
LINC00661-207ENST00000552685 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
LINC00661-207ENST00000552685 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
LINC00661-207ENST00000552685 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
LINC00661-207ENST00000552685 NFAT5O94916 1531 aa14.12□□□□□ -0.15
LINC00661-207ENST00000552685 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
LINC00661-207ENST00000552685 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
LINC00661-207ENST00000552685 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 MON2Q7Z3U7 1717 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 NME9Q86XW9 330 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 PROM2Q8N271 834 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
LINC00661-207ENST00000552685 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 UTRNP46939 3433 aa14.11□□□□□ -0.15
LINC00661-207ENST00000552685 CD163L1Q9NR16 1453 aa14.1□□□□□ -0.15
LINC00661-207ENST00000552685 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
LINC00661-207ENST00000552685 CARD10Q9BWT7 1032 aa14.09□□□□□ -0.15
LINC00661-207ENST00000552685 SLC12A5Q9H2X9 1139 aa14.09□□□□□ -0.15
LINC00661-207ENST00000552685 MYOM1P52179 1685 aa14.08□□□□□ -0.16
LINC00661-207ENST00000552685 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
LINC00661-207ENST00000552685 SBNO2Q9Y2G9 1366 aa14.08□□□□□ -0.16
LINC00661-207ENST00000552685 BCL9O00512 1426 aa14.07□□□□□ -0.16
LINC00661-207ENST00000552685 KCNQ2O43526 872 aa14.06□□□□□ -0.16
LINC00661-207ENST00000552685 NINLQ9Y2I6 1382 aa14.06□□□□□ -0.16
LINC00661-207ENST00000552685 LTN1O94822 1766 aa14.05□□□□□ -0.16
LINC00661-207ENST00000552685 PLSCR1O15162 318 aa14.05□□□□□ -0.16
LINC00661-207ENST00000552685 PTGER2P43116 358 aa14.05□□□□□ -0.16
LINC00661-207ENST00000552685 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
LINC00661-207ENST00000552685 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
LINC00661-207ENST00000552685 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
LINC00661-207ENST00000552685 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
LINC00661-207ENST00000552685 EXOC5O00471 708 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 YY1P25490 414 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 CDCA7Q9BWT1 371 aaPredicted RBP14.04□□□□□ -0.16
LINC00661-207ENST00000552685 SPON1Q9HCB6 807 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 A0A1W2PP64 1363 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
LINC00661-207ENST00000552685 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
LINC00661-207ENST00000552685 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.16
LINC00661-207ENST00000552685 ERBB3P21860 1342 aa14.02□□□□□ -0.17
LINC00661-207ENST00000552685 ANKRD24Q8TF21 1146 aa14.02□□□□□ -0.17
LINC00661-207ENST00000552685 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
LINC00661-207ENST00000552685 ABCC6O95255 1503 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 TESK2Q96S53 571 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
LINC00661-207ENST00000552685 ZBTB7AO95365 584 aa14□□□□□ -0.17
LINC00661-207ENST00000552685 FBLN1P23142 703 aa14□□□□□ -0.17
LINC00661-207ENST00000552685 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
LINC00661-207ENST00000552685 PPP1R1BQ9UD71 204 aaPredicted RBP14□□□□□ -0.17
LINC00661-207ENST00000552685 KAT6BQ8WYB5 2073 aa13.99□□□□□ -0.17
LINC00661-207ENST00000552685 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
LINC00661-207ENST00000552685 IL2RBP14784 551 aa13.98□□□□□ -0.17
LINC00661-207ENST00000552685 IP6K1Q92551 441 aa13.96□□□□□ -0.17
LINC00661-207ENST00000552685 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
LINC00661-207ENST00000552685 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
LINC00661-207ENST00000552685 BTAF1O14981 1849 aa13.95□□□□□ -0.18
LINC00661-207ENST00000552685 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
LINC00661-207ENST00000552685 MAP3K19Q56UN5 1328 aa13.94□□□□□ -0.18
LINC00661-207ENST00000552685 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
LINC00661-207ENST00000552685 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
LINC00661-207ENST00000552685 COG3Q96JB2 828 aa13.94□□□□□ -0.18
LINC00661-207ENST00000552685 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
LINC00661-207ENST00000552685 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
LINC00661-207ENST00000552685 FHDC1Q9C0D6 1143 aaPredicted RBP13.93□□□□□ -0.18
LINC00661-207ENST00000552685 GOLGB1Q14789 3259 aaKnown RBP13.93□□□□□ -0.18
LINC00661-207ENST00000552685 HOXC9P31274 260 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 AMPHP49418 695 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
LINC00661-207ENST00000552685 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
LINC00661-207ENST00000552685 GGNBP2Q9H3C7 697 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 USP47Q96K76 1375 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
LINC00661-207ENST00000552685 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
LINC00661-207ENST00000552685 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
LINC00661-207ENST00000552685 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
LINC00661-207ENST00000552685 ANKRD36BQ8N2N9 1353 aa13.91□□□□□ -0.18
LINC00661-207ENST00000552685 SHANK3Q9BYB0 1731 aa13.9□□□□□ -0.18
LINC00661-207ENST00000552685 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
LINC00661-207ENST00000552685 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
LINC00661-207ENST00000552685 FYB1O15117 783 aa13.89□□□□□ -0.19
LINC00661-207ENST00000552685 KCNQ4P56696 695 aa13.89□□□□□ -0.19
LINC00661-207ENST00000552685 MTFR1LQ9H019 292 aa13.89□□□□□ -0.19
LINC00661-207ENST00000552685 NSD2O96028 1365 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms