RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SH3BP5LQ7L8J4 393 aa6.84□□□□□ -1.31
USP44-208ENST00000552440 ZSCAN1Q8NBB4 408 aa6.84□□□□□ -1.31
USP44-208ENST00000552440 DDRGK1Q96HY6 314 aa6.84□□□□□ -1.31
USP44-208ENST00000552440 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
USP44-208ENST00000552440 PGPEP1Q9NXJ5 209 aa6.84□□□□□ -1.31
USP44-208ENST00000552440 EIF5BO60841 1220 aaKnown RBP6.83□□□□□ -1.32
USP44-208ENST00000552440 SKIV2LQ15477 1246 aaKnown RBP6.83□□□□□ -1.32
USP44-208ENST00000552440 BMP2P12643 396 aa6.83□□□□□ -1.32
USP44-208ENST00000552440 GMPRP36959 345 aa6.83□□□□□ -1.32
USP44-208ENST00000552440 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
USP44-208ENST00000552440 RTL5Q5HYW3 569 aaPredicted RBP6.83□□□□□ -1.32
USP44-208ENST00000552440 CCDC116Q8IYX3 515 aa6.83□□□□□ -1.32
USP44-208ENST00000552440 ITPKCQ96DU7 683 aa6.83□□□□□ -1.32
USP44-208ENST00000552440 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
USP44-208ENST00000552440 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
USP44-208ENST00000552440 MEIOBQ8N635 442 aa6.82□□□□□ -1.32
USP44-208ENST00000552440 ARID3AQ99856 593 aa6.82□□□□□ -1.32
USP44-208ENST00000552440 GPSM3Q9Y4H4 160 aa6.82□□□□□ -1.32
USP44-208ENST00000552440 MAGEB6P1A0A0J9YX57 407 aa6.81□□□□□ -1.32
USP44-208ENST00000552440 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
USP44-208ENST00000552440 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
USP44-208ENST00000552440 POLR3EQ9NVU0 708 aa6.81□□□□□ -1.32
USP44-208ENST00000552440 ATP1B4Q9UN42 357 aaPredicted RBP6.81□□□□□ -1.32
USP44-208ENST00000552440 NR3C2P08235 984 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 FSHRP23945 695 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 PTK2Q05397 1052 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 SH3D19Q5HYK7 790 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.8□□□□□ -1.32
USP44-208ENST00000552440 C6orf118Q5T5N4 469 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 ZBTB33Q86T24 672 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 SLC10A4Q96EP9 437 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
USP44-208ENST00000552440 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
USP44-208ENST00000552440 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
USP44-208ENST00000552440 PPP2R2DQ66LE6 453 aa6.78□□□□□ -1.32
USP44-208ENST00000552440 CTDSPL2Q05D32 466 aa6.78□□□□□ -1.32
USP44-208ENST00000552440 ERFEQ4G0M1 354 aa6.78□□□□□ -1.32
USP44-208ENST00000552440 CARD14Q9BXL6 1004 aa6.78□□□□□ -1.32
USP44-208ENST00000552440 SOS2Q07890 1332 aaPredicted RBP6.78□□□□□ -1.32
USP44-208ENST00000552440 VEGFBP49765 207 aa6.77□□□□□ -1.33
USP44-208ENST00000552440 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 ERBB4Q15303 1308 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 TTLL8A6PVC2 850 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
USP44-208ENST00000552440 Q6ZVU0 165 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 CCDC125Q86Z20 511 aa6.76□□□□□ -1.33
USP44-208ENST00000552440 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
USP44-208ENST00000552440 SHROOM4Q9ULL8 1493 aa6.75□□□□□ -1.33
USP44-208ENST00000552440 FLIIQ13045 1269 aa6.74□□□□□ -1.33
USP44-208ENST00000552440 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP44-208ENST00000552440 ZNF592Q92610 1267 aa6.73□□□□□ -1.33
USP44-208ENST00000552440 GOPCQ9HD26 462 aa6.73□□□□□ -1.33
USP44-208ENST00000552440 ARID3CA6NKF2 412 aa6.73□□□□□ -1.33
USP44-208ENST00000552440 SPINT1O43278 529 aa6.73□□□□□ -1.33
USP44-208ENST00000552440 SOBPA7XYQ1 873 aa6.72□□□□□ -1.33
USP44-208ENST00000552440 AP1G2O75843 785 aa6.72□□□□□ -1.33
USP44-208ENST00000552440 LRRN4Q8WUT4 740 aa6.72□□□□□ -1.33
USP44-208ENST00000552440 DNMT3LQ9UJW3 386 aa6.72□□□□□ -1.33
USP44-208ENST00000552440 APBB1O00213 710 aa6.71□□□□□ -1.33
USP44-208ENST00000552440 NR6A1Q15406 480 aa6.71□□□□□ -1.33
USP44-208ENST00000552440 TMEM259Q4ZIN3 620 aa6.71□□□□□ -1.33
USP44-208ENST00000552440 DZIP3Q86Y13 1208 aaKnown RBP6.71□□□□□ -1.34
USP44-208ENST00000552440 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
USP44-208ENST00000552440 NANOS1Q8WY41 292 aaKnown RBP6.71□□□□□ -1.34
USP44-208ENST00000552440 IGSF3O75054 1194 aa6.7□□□□□ -1.34
USP44-208ENST00000552440 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
USP44-208ENST00000552440 ADAM32Q8TC27 787 aa6.7□□□□□ -1.34
USP44-208ENST00000552440 MCCD1P59942 119 aaPredicted RBP6.69□□□□□ -1.34
USP44-208ENST00000552440 PTSQ03393 145 aa6.69□□□□□ -1.34
USP44-208ENST00000552440 PROCA1Q8NCQ7 364 aaPredicted RBP6.69□□□□□ -1.34
USP44-208ENST00000552440 RNF225M0QZC1 329 aaPredicted RBP6.69□□□□□ -1.34
USP44-208ENST00000552440 INTS6LQ5JSJ4 861 aaKnown RBP6.69□□□□□ -1.34
USP44-208ENST00000552440 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
USP44-208ENST00000552440 HMGB1P09429 215 aaKnown RBP6.68□□□□□ -1.34
USP44-208ENST00000552440 A6NJR5 290 aa6.67□□□□□ -1.34
USP44-208ENST00000552440 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
USP44-208ENST00000552440 CBLBQ13191 982 aa6.67□□□□□ -1.34
USP44-208ENST00000552440 CCDC155Q8N6L0 562 aa6.67□□□□□ -1.34
USP44-208ENST00000552440 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
USP44-208ENST00000552440 FIGNL2A6NMB9 653 aa6.66□□□□□ -1.34
USP44-208ENST00000552440 ADH1AP07327 375 aa6.66□□□□□ -1.34
USP44-208ENST00000552440 RNF20Q5VTR2 975 aa6.66□□□□□ -1.34
USP44-208ENST00000552440 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
USP44-208ENST00000552440 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
USP44-208ENST00000552440 SLC35F4A4IF30 521 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 TRAK2O60296 914 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 RFC5P40937 340 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 RELBQ01201 579 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 CLUAP1Q96AJ1 413 aa6.65□□□□□ -1.34
USP44-208ENST00000552440 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.34
USP44-208ENST00000552440 ESPNB1AK53 854 aa6.64□□□□□ -1.35
USP44-208ENST00000552440 CDK11BP21127 795 aaKnown RBP6.64□□□□□ -1.35
USP44-208ENST00000552440 ITGA6P23229 1130 aa6.64□□□□□ -1.35
USP44-208ENST00000552440 CDK11AQ9UQ88 783 aaPredicted RBP6.64□□□□□ -1.35
USP44-208ENST00000552440 PTGIRP43119 386 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms