RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
ATP2B1-210ENST00000552275 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
ATP2B1-210ENST00000552275 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
ATP2B1-210ENST00000552275 CARNS1A5YM72 827 aa10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 LZTS3O60299 673 aaPredicted RBP10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 NCOA4Q13772 614 aa10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 ERFEQ4G0M1 354 aa10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 FOXJ1Q92949 421 aa10.35□□□□□ -0.75
ATP2B1-210ENST00000552275 MAP7D1Q3KQU3 841 aa10.34□□□□□ -0.75
ATP2B1-210ENST00000552275 C4orf48Q5BLP8 95 aa10.34□□□□□ -0.75
ATP2B1-210ENST00000552275 ZMIZ1Q9ULJ6 1067 aa10.34□□□□□ -0.75
ATP2B1-210ENST00000552275 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 KCNA1Q09470 495 aa10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 AGERQ15109 404 aa10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 C1QTNF2Q9BXJ5 285 aa10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 MKRN1Q9UHC7 482 aaKnown RBP10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 CCDC9Q9Y3X0 531 aaKnown RBP10.33□□□□□ -0.76
ATP2B1-210ENST00000552275 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
ATP2B1-210ENST00000552275 NOVA2Q9UNW9 492 aaKnown RBP10.32□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L15C9J2P7 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L10C9JJH3 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L13C9JLJ4 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L12C9JPN9 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L11C9JVI0 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L21D6R901 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L18D6R9N7 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L22D6RA61 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L17D6RBQ6 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L19D6RCP7 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L20D6RJB6 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 USP17L24Q0WX57 530 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 EML3Q32P44 896 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 CRTC2Q53ET0 693 aaPredicted RBP10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 TMEM164Q5U3C3 297 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 STK32AQ8WU08 396 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
ATP2B1-210ENST00000552275 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
ATP2B1-210ENST00000552275 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
ATP2B1-210ENST00000552275 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 RASA1P20936 1047 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 SH3BP2P78314 561 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 PTK7Q13308 1070 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 DOLKQ9UPQ8 538 aa10.29□□□□□ -0.76
ATP2B1-210ENST00000552275 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
ATP2B1-210ENST00000552275 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
ATP2B1-210ENST00000552275 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
ATP2B1-210ENST00000552275 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
ATP2B1-210ENST00000552275 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
ATP2B1-210ENST00000552275 ESPNB1AK53 854 aa10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 ZBTB24O43167 697 aaPredicted RBP10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 TRIM32Q13049 653 aa10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 CDV3Q9UKY7 258 aaKnown RBP10.27□□□□□ -0.77
ATP2B1-210ENST00000552275 GGCXP38435 758 aa10.26□□□□□ -0.77
ATP2B1-210ENST00000552275 PLA2G2CQ5R387 149 aa10.26□□□□□ -0.77
ATP2B1-210ENST00000552275 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
ATP2B1-210ENST00000552275 Q6ZNB5 142 aa10.26□□□□□ -0.77
ATP2B1-210ENST00000552275 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
ATP2B1-210ENST00000552275 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
ATP2B1-210ENST00000552275 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
ATP2B1-210ENST00000552275 FAM200AQ8TCP9 573 aa10.25□□□□□ -0.77
ATP2B1-210ENST00000552275 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
ATP2B1-210ENST00000552275 WNT7BP56706 349 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 CLDN10P78369 228 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
ATP2B1-210ENST00000552275 LARGE2Q8N3Y3 721 aa10.23□□□□□ -0.77
ATP2B1-210ENST00000552275 DNAAF2Q9NVR5 837 aaKnown RBP10.23□□□□□ -0.77
ATP2B1-210ENST00000552275 VARSP26640 1264 aaKnown RBP10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 SKOR1P84550 965 aa10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 TMCO4Q5TGY1 634 aa10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 ZNF594Q96JF6 807 aaPredicted RBP10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 PCDHB11Q9Y5F2 797 aa10.22□□□□□ -0.77
ATP2B1-210ENST00000552275 RPIAP49247 311 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 GTF2IP78347 998 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 DPYDQ12882 1025 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 SIX5Q8N196 739 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 MAP4K5Q9Y4K4 846 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
ATP2B1-210ENST00000552275 GFRA3O60609 400 aa10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 CLP1Q92989 425 aaKnown RBP10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 SIRT1Q96EB6 747 aa10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 KIAA1024Q9UPX6 916 aa10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
ATP2B1-210ENST00000552275 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
ATP2B1-210ENST00000552275 DKK1O94907 266 aa10.19□□□□□ -0.78
ATP2B1-210ENST00000552275 USP4Q13107 963 aa10.19□□□□□ -0.78
ATP2B1-210ENST00000552275 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms