RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 A0A0G2JS52 829 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 NUBP1P53384 320 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 EVA1CP58658 441 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 MYT1Q01538 1121 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 BTG4Q9NY30 223 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 TERF2IPQ9NYB0 399 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 SLIT2O94813 1529 aa8.24□□□□□ -1.09
CCDC65-204ENST00000552188 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 RGPD5Q99666 1765 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 ATRNO75882 1429 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 GJD4Q96KN9 370 aaPredicted RBP8.23□□□□□ -1.09
CCDC65-204ENST00000552188 BRWD3Q6RI45 1802 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 CDK12Q9NYV4 1490 aaPredicted RBP8.23□□□□□ -1.09
CCDC65-204ENST00000552188 PIK3C2AO00443 1686 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 TTC21BQ7Z4L5 1316 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
CCDC65-204ENST00000552188 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 DCAF8Q5TAQ9 597 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC65-204ENST00000552188 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
CCDC65-204ENST00000552188 STRN4Q9NRL3 753 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 KIAA0232Q92628 1395 aa8.22□□□□□ -1.09
CCDC65-204ENST00000552188 RGS12O14924 1447 aa8.21□□□□□ -1.09
CCDC65-204ENST00000552188 LTN1O94822 1766 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 SOX12O15370 315 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 GCP02774 474 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 EIF4G2P78344 907 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC65-204ENST00000552188 VPS72Q15906 364 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 SLC12A5Q9H2X9 1139 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 NINLQ9Y2I6 1382 aa8.21□□□□□ -1.1
CCDC65-204ENST00000552188 CPSF1Q10570 1443 aaKnown RBP8.2□□□□□ -1.1
CCDC65-204ENST00000552188 KIF20BQ96Q89 1820 aa8.2□□□□□ -1.1
CCDC65-204ENST00000552188 GLI3P10071 1580 aa8.2□□□□□ -1.1
CCDC65-204ENST00000552188 TESK2Q96S53 571 aa8.2□□□□□ -1.1
CCDC65-204ENST00000552188 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
CCDC65-204ENST00000552188 USP19O94966 1318 aa8.19□□□□□ -1.1
CCDC65-204ENST00000552188 EDC4Q6P2E9 1401 aaKnown RBP8.19□□□□□ -1.1
CCDC65-204ENST00000552188 SLIT3O75094 1523 aa8.19□□□□□ -1.1
CCDC65-204ENST00000552188 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
CCDC65-204ENST00000552188 FAM212AQ96EL1 285 aa8.18□□□□□ -1.1
CCDC65-204ENST00000552188 USP35Q9P2H5 1018 aa8.18□□□□□ -1.1
CCDC65-204ENST00000552188 A0A1W2PP64 1363 aa8.18□□□□□ -1.1
CCDC65-204ENST00000552188 SSH2Q76I76 1423 aa8.18□□□□□ -1.1
CCDC65-204ENST00000552188 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
CCDC65-204ENST00000552188 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
CCDC65-204ENST00000552188 NME9Q86XW9 330 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 CPDO75976 1380 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 MYOM1P52179 1685 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 LMO7Q8WWI1 1683 aa8.17□□□□□ -1.1
CCDC65-204ENST00000552188 ECM2O94769 699 aaPredicted RBP8.16□□□□□ -1.1
CCDC65-204ENST00000552188 COL18A1P39060 1754 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
CCDC65-204ENST00000552188 TOM1L2Q6ZVM7 507 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 ANKRD36BQ8N2N9 1353 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 UPF1Q92900 1129 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC65-204ENST00000552188 COG3Q96JB2 828 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 CD163L1Q9NR16 1453 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 CAMTA1Q9Y6Y1 1673 aa8.16□□□□□ -1.1
CCDC65-204ENST00000552188 SPATA31A5Q5VU36 1347 aa8.15□□□□□ -1.1
CCDC65-204ENST00000552188 SPATA31A7Q8IWB4 1347 aa8.15□□□□□ -1.1
CCDC65-204ENST00000552188 GSE1Q14687 1217 aa8.15□□□□□ -1.1
CCDC65-204ENST00000552188 KRT27Q7Z3Y8 459 aa8.15□□□□□ -1.1
CCDC65-204ENST00000552188 MAP2P11137 1827 aaKnown RBP8.15□□□□□ -1.11
CCDC65-204ENST00000552188 WNK3Q9BYP7 1800 aa8.15□□□□□ -1.11
CCDC65-204ENST00000552188 COL5A2P05997 1499 aaPredicted RBP8.14□□□□□ -1.11
CCDC65-204ENST00000552188 CRB1P82279 1406 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 AATKQ6ZMQ8 1374 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 USP31Q70CQ4 1352 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 SPATA31A1Q5TZJ5 1347 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
CCDC65-204ENST00000552188 ARHGEF25Q86VW2 580 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
CCDC65-204ENST00000552188 ANKRD26Q9UPS8 1709 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 AMPHP49418 695 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 TCP11L2Q8N4U5 519 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 THRAP3Q9Y2W1 955 aaKnown RBP8.13□□□□□ -1.11
CCDC65-204ENST00000552188 FAM208AQ9UK61 1670 aaKnown RBP8.13□□□□□ -1.11
CCDC65-204ENST00000552188 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 NFAT5O94916 1531 aa8.13□□□□□ -1.11
CCDC65-204ENST00000552188 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
CCDC65-204ENST00000552188 THSD7AQ9UPZ6 1657 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 WDR17Q8IZU2 1322 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
CCDC65-204ENST00000552188 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 ABCC6O95255 1503 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms