RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CRB1P82279 1406 aa15.48■□□□□ 0.07
SLC48A1-209ENST00000552003 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
SLC48A1-209ENST00000552003 ZNF827Q17R98 1081 aa15.47■□□□□ 0.07
SLC48A1-209ENST00000552003 WNK3Q9BYP7 1800 aa15.47■□□□□ 0.07
SLC48A1-209ENST00000552003 AATKQ6ZMQ8 1374 aa15.47■□□□□ 0.07
SLC48A1-209ENST00000552003 USP19O94966 1318 aa15.46■□□□□ 0.07
SLC48A1-209ENST00000552003 ADGRB1O14514 1584 aa15.46■□□□□ 0.07
SLC48A1-209ENST00000552003 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
SLC48A1-209ENST00000552003 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
SLC48A1-209ENST00000552003 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
SLC48A1-209ENST00000552003 DNAJC5GQ8N7S2 189 aa15.44■□□□□ 0.06
SLC48A1-209ENST00000552003 COL13A1Q5TAT6 717 aaPredicted RBP15.43■□□□□ 0.06
SLC48A1-209ENST00000552003 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
SLC48A1-209ENST00000552003 PCNTO95613 3336 aa15.43■□□□□ 0.06
SLC48A1-209ENST00000552003 ADCY9O60503 1353 aa15.42■□□□□ 0.06
SLC48A1-209ENST00000552003 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
SLC48A1-209ENST00000552003 CAPN15O75808 1086 aa15.42■□□□□ 0.06
SLC48A1-209ENST00000552003 GCP02774 474 aa15.42■□□□□ 0.06
SLC48A1-209ENST00000552003 LRRC4BQ9NT99 713 aa15.42■□□□□ 0.06
SLC48A1-209ENST00000552003 COL18A1P39060 1754 aa15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 POLR3AO14802 1390 aaPredicted RBP15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 ITSN1Q15811 1721 aa15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 TOPAZ1Q8N9V7 1692 aa15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 ACEP12821 1306 aa15.41■□□□□ 0.06
SLC48A1-209ENST00000552003 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
SLC48A1-209ENST00000552003 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
SLC48A1-209ENST00000552003 ZNF526Q8TF50 670 aaPredicted RBP15.4■□□□□ 0.06
SLC48A1-209ENST00000552003 AXIN2Q9Y2T1 843 aa15.4■□□□□ 0.06
SLC48A1-209ENST00000552003 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
SLC48A1-209ENST00000552003 NHSQ6T4R5 1651 aa15.38■□□□□ 0.05
SLC48A1-209ENST00000552003 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
SLC48A1-209ENST00000552003 KIF3CO14782 793 aa15.37■□□□□ 0.05
SLC48A1-209ENST00000552003 GRIN3BO60391 1043 aa15.37■□□□□ 0.05
SLC48A1-209ENST00000552003 TOM1L2Q6ZVM7 507 aa15.37■□□□□ 0.05
SLC48A1-209ENST00000552003 PNPLA7Q6ZV29 1317 aa15.37■□□□□ 0.05
SLC48A1-209ENST00000552003 ACSBG1Q96GR2 724 aa15.36■□□□□ 0.05
SLC48A1-209ENST00000552003 QSER1Q2KHR3 1735 aa15.36■□□□□ 0.05
SLC48A1-209ENST00000552003 RGPD5Q99666 1765 aa15.35■□□□□ 0.05
SLC48A1-209ENST00000552003 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
SLC48A1-209ENST00000552003 BTAF1O14981 1849 aa15.35■□□□□ 0.05
SLC48A1-209ENST00000552003 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
SLC48A1-209ENST00000552003 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
SLC48A1-209ENST00000552003 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.04
SLC48A1-209ENST00000552003 POLD1P28340 1107 aa15.33■□□□□ 0.04
SLC48A1-209ENST00000552003 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.04
SLC48A1-209ENST00000552003 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
SLC48A1-209ENST00000552003 PRELPP51888 382 aa15.32■□□□□ 0.04
SLC48A1-209ENST00000552003 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
SLC48A1-209ENST00000552003 SLIT3O75094 1523 aa15.32■□□□□ 0.04
SLC48A1-209ENST00000552003 KAT6BQ8WYB5 2073 aa15.31■□□□□ 0.04
SLC48A1-209ENST00000552003 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
SLC48A1-209ENST00000552003 EXOC5O00471 708 aa15.3■□□□□ 0.04
SLC48A1-209ENST00000552003 SLC34A2O95436 690 aa15.3■□□□□ 0.04
SLC48A1-209ENST00000552003 APLP1P51693 650 aa15.3■□□□□ 0.04
SLC48A1-209ENST00000552003 KCNQ4P56696 695 aa15.3■□□□□ 0.04
SLC48A1-209ENST00000552003 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
SLC48A1-209ENST00000552003 USP6P35125 1406 aa15.29■□□□□ 0.04
SLC48A1-209ENST00000552003 CARD10Q9BWT7 1032 aa15.29■□□□□ 0.04
SLC48A1-209ENST00000552003 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
SLC48A1-209ENST00000552003 TNS2Q63HR2 1409 aa15.28■□□□□ 0.04
SLC48A1-209ENST00000552003 HTRA3P83110 453 aa15.28■□□□□ 0.04
SLC48A1-209ENST00000552003 BRD4O60885 1362 aaPredicted RBP15.26■□□□□ 0.03
SLC48A1-209ENST00000552003 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
SLC48A1-209ENST00000552003 TNS4Q8IZW8 715 aa15.26■□□□□ 0.03
SLC48A1-209ENST00000552003 JMYQ8N9B5 988 aa15.25■□□□□ 0.03
SLC48A1-209ENST00000552003 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
SLC48A1-209ENST00000552003 CPSF1Q10570 1443 aaKnown RBP15.25■□□□□ 0.03
SLC48A1-209ENST00000552003 ABCC6O95255 1503 aa15.24■□□□□ 0.03
SLC48A1-209ENST00000552003 NLRP6P59044 892 aa15.24■□□□□ 0.03
SLC48A1-209ENST00000552003 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
SLC48A1-209ENST00000552003 PIK3C2AO00443 1686 aa15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 KCNA4P22459 653 aa15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 PPIP5K1Q6PFW1 1433 aa15.23■□□□□ 0.03
SLC48A1-209ENST00000552003 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
SLC48A1-209ENST00000552003 KLRG1Q96E93 195 aa15.21■□□□□ 0.03
SLC48A1-209ENST00000552003 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
SLC48A1-209ENST00000552003 SLC27A3Q5K4L6 730 aa15.2■□□□□ 0.02
SLC48A1-209ENST00000552003 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
SLC48A1-209ENST00000552003 TOMM70O94826 608 aa15.19■□□□□ 0.02
SLC48A1-209ENST00000552003 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
SLC48A1-209ENST00000552003 CCDC7Q96M83 1385 aa15.19■□□□□ 0.02
SLC48A1-209ENST00000552003 LY75O60449 1722 aa15.18■□□□□ 0.02
SLC48A1-209ENST00000552003 SOX12O15370 315 aa15.16■□□□□ 0.02
SLC48A1-209ENST00000552003 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
SLC48A1-209ENST00000552003 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
SLC48A1-209ENST00000552003 NFAT5O94916 1531 aa15.16■□□□□ 0.02
SLC48A1-209ENST00000552003 NSD2O96028 1365 aa15.15■□□□□ 0.02
SLC48A1-209ENST00000552003 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
SLC48A1-209ENST00000552003 MSH5O43196 834 aa15.14■□□□□ 0.01
SLC48A1-209ENST00000552003 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
SLC48A1-209ENST00000552003 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
SLC48A1-209ENST00000552003 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
SLC48A1-209ENST00000552003 CICQ96RK0 1608 aaPredicted RBP15.14■□□□□ 0.01
SLC48A1-209ENST00000552003 IL2RBP14784 551 aa15.12■□□□□ 0.01
SLC48A1-209ENST00000552003 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
SLC48A1-209ENST00000552003 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms