RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 CD109Q6YHK3 1445 aa6.92□□□□□ -1.3
CCNT1-204ENST00000551989 DLC1Q96QB1 1528 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 KNDC1Q76NI1 1749 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 HAP1P54257 671 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-204ENST00000551989 NBR1Q14596 966 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 CFAP70Q5T0N1 1121 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 PNNQ9H307 717 aaKnown RBP6.91□□□□□ -1.3
CCNT1-204ENST00000551989 EVC2Q86UK5 1308 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 ADGRF5Q8IZF2 1346 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
CCNT1-204ENST00000551989 APAF1O14727 1248 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.3
CCNT1-204ENST00000551989 VGFO15240 615 aaPredicted RBP6.9□□□□□ -1.3
CCNT1-204ENST00000551989 PLIN1O60240 522 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 NEFMP07197 916 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 BECN1Q14457 450 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 C8orf34Q49A92 452 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 NPM2Q86SE8 214 aaKnown RBP6.9□□□□□ -1.3
CCNT1-204ENST00000551989 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 MYH16Q9H6N6 1097 aa6.9□□□□□ -1.3
CCNT1-204ENST00000551989 MORC1Q86VD1 984 aa6.89□□□□□ -1.31
CCNT1-204ENST00000551989 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
CCNT1-204ENST00000551989 ZNF710Q8N1W2 664 aa6.89□□□□□ -1.31
CCNT1-204ENST00000551989 ZSWIM6Q9HCJ5 1215 aa6.89□□□□□ -1.31
CCNT1-204ENST00000551989 IL16Q14005 1332 aa6.89□□□□□ -1.31
CCNT1-204ENST00000551989 SETD1AO15047 1707 aaKnown RBP6.89□□□□□ -1.31
CCNT1-204ENST00000551989 ITSN1Q15811 1721 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 AGLP35573 1532 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 COL3A1P02461 1466 aaPredicted RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 EIF5BO60841 1220 aaKnown RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 CANXP27824 592 aaKnown RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 C20orf194Q5TEA3 1177 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 GPR153Q6NV75 609 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 ZFP91Q96JP5 570 aaPredicted RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 CARD14Q9BXL6 1004 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 UPF2Q9HAU5 1272 aaKnown RBP6.88□□□□□ -1.31
CCNT1-204ENST00000551989 SLC52A1Q9NWF4 448 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
CCNT1-204ENST00000551989 MON2Q7Z3U7 1717 aa6.87□□□□□ -1.31
CCNT1-204ENST00000551989 ATP7BP35670 1465 aa6.87□□□□□ -1.31
CCNT1-204ENST00000551989 VSIG10Q8N0Z9 540 aa6.87□□□□□ -1.31
CCNT1-204ENST00000551989 MAP2P11137 1827 aaKnown RBP6.87□□□□□ -1.31
CCNT1-204ENST00000551989 AKAP12Q02952 1782 aa6.87□□□□□ -1.31
CCNT1-204ENST00000551989 PTPRMP28827 1452 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 NLRP1Q9C000 1473 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 PPIP5K1Q6PFW1 1433 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 ERBB3P21860 1342 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 RIMBP2O15034 1052 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 RWDD1Q9H446 243 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-204ENST00000551989 PHF8Q9UPP1 1060 aa6.86□□□□□ -1.31
CCNT1-204ENST00000551989 RARSP54136 660 aaKnown RBP6.85□□□□□ -1.31
CCNT1-204ENST00000551989 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 CCDC146Q8IYE0 955 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 TCP11L2Q8N4U5 519 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 RIMBP3CA6NJZ7 1639 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 RIMBP3BA6NNM3 1639 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 RIMBP3Q9UFD9 1639 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 ALKQ9UM73 1620 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 SPATA31D1Q6ZQQ2 1576 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 DLG5Q8TDM6 1919 aa6.85□□□□□ -1.31
CCNT1-204ENST00000551989 KIF16BQ96L93 1317 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 SENP3-EIF4A1A0A087X0R7 540 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 ZKSCAN2Q63HK3 967 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 ZNF687Q8N1G0 1237 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 FBXO22Q8NEZ5 403 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 CFAP44Q96MT7 982 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 TERF2IPQ9NYB0 399 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 DDX19BQ9UMR2 479 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 LAS1LQ9Y4W2 734 aaKnown RBP6.84□□□□□ -1.31
CCNT1-204ENST00000551989 ARHGEF40Q8TER5 1519 aa6.84□□□□□ -1.31
CCNT1-204ENST00000551989 CACNA1FO60840 1977 aa6.84□□□□□ -1.32
CCNT1-204ENST00000551989 PNPLA6Q8IY17 1366 aa6.83□□□□□ -1.32
CCNT1-204ENST00000551989 BCAR3O75815 825 aa6.83□□□□□ -1.32
CCNT1-204ENST00000551989 RGS3P49796 1198 aa6.83□□□□□ -1.32
CCNT1-204ENST00000551989 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 HDAC1Q13547 482 aaPredicted RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 MVPQ14764 893 aaKnown RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 VARS2Q5ST30 1063 aaKnown RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
CCNT1-204ENST00000551989 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
CCNT1-204ENST00000551989 A0A1W2PP64 1363 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 NRKQ7Z2Y5 1582 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 LRRC7Q96NW7 1537 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 RIMS1Q86UR5 1692 aaKnown RBP6.82□□□□□ -1.32
CCNT1-204ENST00000551989 CD163L1Q9NR16 1453 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 CDK12Q9NYV4 1490 aaPredicted RBP6.82□□□□□ -1.32
CCNT1-204ENST00000551989 IPO8O15397 1037 aaKnown RBP6.82□□□□□ -1.32
CCNT1-204ENST00000551989 MTHFSP49914 203 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
CCNT1-204ENST00000551989 CPS1P31327 1500 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 C3P01024 1663 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 CHGAP10645 457 aaKnown RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 PTMSP20962 102 aa6.81□□□□□ -1.32
CCNT1-204ENST00000551989 L1TD1Q5T7N2 865 aaKnown RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 HDGFL2Q7Z4V5 671 aaPredicted RBP6.81□□□□□ -1.32
CCNT1-204ENST00000551989 FTSJ3Q8IY81 847 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms