RNA–Protein interactions for RNA: ENST00000551147.1

PPFIA2-222, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-222ENST00000551147 GLI3P10071 1580 aa16.74■□□□□ 0.27
PPFIA2-222ENST00000551147 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
PPFIA2-222ENST00000551147 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
PPFIA2-222ENST00000551147 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
PPFIA2-222ENST00000551147 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
PPFIA2-222ENST00000551147 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
PPFIA2-222ENST00000551147 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
PPFIA2-222ENST00000551147 AXIN2Q9Y2T1 843 aa16.72■□□□□ 0.27
PPFIA2-222ENST00000551147 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
PPFIA2-222ENST00000551147 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
PPFIA2-222ENST00000551147 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.27
PPFIA2-222ENST00000551147 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
PPFIA2-222ENST00000551147 MAP2P11137 1827 aaKnown RBP16.7■□□□□ 0.26
PPFIA2-222ENST00000551147 RXRBP28702 533 aa16.7■□□□□ 0.26
PPFIA2-222ENST00000551147 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
PPFIA2-222ENST00000551147 TNNT2P45379 298 aaPredicted RBP16.69■□□□□ 0.26
PPFIA2-222ENST00000551147 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
PPFIA2-222ENST00000551147 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
PPFIA2-222ENST00000551147 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
PPFIA2-222ENST00000551147 VPS72Q15906 364 aa16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 TRPC5Q9UL62 973 aaPredicted RBP16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
PPFIA2-222ENST00000551147 FLT4P35916 1363 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 KIF24Q5T7B8 1368 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 HOXC9P31274 260 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 IP6K1Q92551 441 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 ERBB3P21860 1342 aa16.67■□□□□ 0.26
PPFIA2-222ENST00000551147 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
PPFIA2-222ENST00000551147 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
PPFIA2-222ENST00000551147 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
PPFIA2-222ENST00000551147 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
PPFIA2-222ENST00000551147 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
PPFIA2-222ENST00000551147 RGS12O14924 1447 aa16.65■□□□□ 0.26
PPFIA2-222ENST00000551147 CRB1P82279 1406 aa16.65■□□□□ 0.26
PPFIA2-222ENST00000551147 RGPD2P0DJD1 1756 aa16.65■□□□□ 0.26
PPFIA2-222ENST00000551147 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
PPFIA2-222ENST00000551147 INSRP06213 1382 aa16.64■□□□□ 0.26
PPFIA2-222ENST00000551147 AMPHP49418 695 aa16.64■□□□□ 0.25
PPFIA2-222ENST00000551147 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
PPFIA2-222ENST00000551147 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
PPFIA2-222ENST00000551147 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
PPFIA2-222ENST00000551147 GJD4Q96KN9 370 aaPredicted RBP16.63■□□□□ 0.25
PPFIA2-222ENST00000551147 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
PPFIA2-222ENST00000551147 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
PPFIA2-222ENST00000551147 EVA1CP58658 441 aa16.61■□□□□ 0.25
PPFIA2-222ENST00000551147 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
PPFIA2-222ENST00000551147 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
PPFIA2-222ENST00000551147 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
PPFIA2-222ENST00000551147 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
PPFIA2-222ENST00000551147 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 DISP2A7MBM2 1401 aa16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 RGPD1P0DJD0 1748 aa16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
PPFIA2-222ENST00000551147 EP400Q96L91 3159 aa16.58■□□□□ 0.24
PPFIA2-222ENST00000551147 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
PPFIA2-222ENST00000551147 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
PPFIA2-222ENST00000551147 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
PPFIA2-222ENST00000551147 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
PPFIA2-222ENST00000551147 MTHFSP49914 203 aa16.57■□□□□ 0.24
PPFIA2-222ENST00000551147 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
PPFIA2-222ENST00000551147 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
PPFIA2-222ENST00000551147 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
PPFIA2-222ENST00000551147 EIF4A2Q14240 407 aaKnown RBP16.56■□□□□ 0.24
PPFIA2-222ENST00000551147 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
PPFIA2-222ENST00000551147 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
PPFIA2-222ENST00000551147 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
PPFIA2-222ENST00000551147 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
PPFIA2-222ENST00000551147 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
PPFIA2-222ENST00000551147 THRAP3Q9Y2W1 955 aaKnown RBP16.54■□□□□ 0.24
PPFIA2-222ENST00000551147 MEGF6O75095 1541 aa16.54■□□□□ 0.24
PPFIA2-222ENST00000551147 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
PPFIA2-222ENST00000551147 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
PPFIA2-222ENST00000551147 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
PPFIA2-222ENST00000551147 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 IL13P35225 146 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 RALBP1Q15311 655 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 EYA1Q99502 592 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 SRCAPQ6ZRS2 3230 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 TNS2Q63HR2 1409 aa16.51■□□□□ 0.23
PPFIA2-222ENST00000551147 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
PPFIA2-222ENST00000551147 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
PPFIA2-222ENST00000551147 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
PPFIA2-222ENST00000551147 A0A0G2JS52 829 aa16.48■□□□□ 0.23
PPFIA2-222ENST00000551147 MYT1Q01538 1121 aa16.48■□□□□ 0.23
PPFIA2-222ENST00000551147 IL2RBP14784 551 aa16.47■□□□□ 0.23
PPFIA2-222ENST00000551147 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
PPFIA2-222ENST00000551147 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
PPFIA2-222ENST00000551147 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
PPFIA2-222ENST00000551147 KDRP35968 1356 aa16.46■□□□□ 0.23
PPFIA2-222ENST00000551147 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
PPFIA2-222ENST00000551147 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
PPFIA2-222ENST00000551147 DDB1Q16531 1140 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms