RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 NBPF20Q3BBV1 942 aa10.44□□□□□ -0.74
GPN3-209ENST00000551079 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
GPN3-209ENST00000551079 CCDC116Q8IYX3 515 aa10.44□□□□□ -0.74
GPN3-209ENST00000551079 ITPKCQ96DU7 683 aa10.43□□□□□ -0.74
GPN3-209ENST00000551079 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
GPN3-209ENST00000551079 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
GPN3-209ENST00000551079 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
GPN3-209ENST00000551079 FBXO45P0C2W1 286 aa10.41□□□□□ -0.74
GPN3-209ENST00000551079 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
GPN3-209ENST00000551079 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
GPN3-209ENST00000551079 BMP1P13497 986 aa10.4□□□□□ -0.74
GPN3-209ENST00000551079 TMEM132AQ24JP5 1023 aa10.4□□□□□ -0.74
GPN3-209ENST00000551079 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
GPN3-209ENST00000551079 TRIM47Q96LD4 638 aa10.4□□□□□ -0.74
GPN3-209ENST00000551079 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
GPN3-209ENST00000551079 NR1H3Q13133 447 aa10.39□□□□□ -0.75
GPN3-209ENST00000551079 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
GPN3-209ENST00000551079 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
GPN3-209ENST00000551079 GPR37L1O60883 481 aa10.38□□□□□ -0.75
GPN3-209ENST00000551079 SCARF1Q14162 830 aa10.38□□□□□ -0.75
GPN3-209ENST00000551079 INTS6LQ5JSJ4 861 aaKnown RBP10.38□□□□□ -0.75
GPN3-209ENST00000551079 PPP1R26Q5T8A7 1209 aaPredicted RBP10.38□□□□□ -0.75
GPN3-209ENST00000551079 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
GPN3-209ENST00000551079 PCDHB9Q9Y5E1 797 aa10.38□□□□□ -0.75
GPN3-209ENST00000551079 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
GPN3-209ENST00000551079 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
GPN3-209ENST00000551079 MCM6Q14566 821 aa10.36□□□□□ -0.75
GPN3-209ENST00000551079 ESPNB1AK53 854 aa10.35□□□□□ -0.75
GPN3-209ENST00000551079 UPP2O95045 317 aa10.35□□□□□ -0.75
GPN3-209ENST00000551079 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
GPN3-209ENST00000551079 ZFP42Q96MM3 310 aa10.35□□□□□ -0.75
GPN3-209ENST00000551079 MEIOBQ8N635 442 aa10.34□□□□□ -0.75
GPN3-209ENST00000551079 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
GPN3-209ENST00000551079 SNRPBP14678 240 aaKnown RBP10.33□□□□□ -0.76
GPN3-209ENST00000551079 RAB15P59190 212 aa10.33□□□□□ -0.76
GPN3-209ENST00000551079 PURBQ96QR8 312 aaKnown RBP10.33□□□□□ -0.76
GPN3-209ENST00000551079 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
GPN3-209ENST00000551079 ZNF775Q96BV0 537 aaPredicted RBP10.32□□□□□ -0.76
GPN3-209ENST00000551079 TSEN34Q9BSV6 310 aaKnown RBP10.32□□□□□ -0.76
GPN3-209ENST00000551079 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
GPN3-209ENST00000551079 Q6ZVU0 165 aa10.31□□□□□ -0.76
GPN3-209ENST00000551079 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
GPN3-209ENST00000551079 GDPD2Q9HCC8 539 aa10.31□□□□□ -0.76
GPN3-209ENST00000551079 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
GPN3-209ENST00000551079 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
GPN3-209ENST00000551079 BMP2P12643 396 aa10.3□□□□□ -0.76
GPN3-209ENST00000551079 FLIIQ13045 1269 aa10.3□□□□□ -0.76
GPN3-209ENST00000551079 C6orf118Q5T5N4 469 aa10.3□□□□□ -0.76
GPN3-209ENST00000551079 ABL2P42684 1182 aa10.29□□□□□ -0.76
GPN3-209ENST00000551079 CBLBQ13191 982 aa10.29□□□□□ -0.76
GPN3-209ENST00000551079 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
GPN3-209ENST00000551079 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
GPN3-209ENST00000551079 IRF5Q13568 498 aa10.28□□□□□ -0.76
GPN3-209ENST00000551079 ZNF784Q8NCA9 323 aaPredicted RBP10.28□□□□□ -0.76
GPN3-209ENST00000551079 WASHC4Q2M389 1173 aa10.27□□□□□ -0.77
GPN3-209ENST00000551079 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
GPN3-209ENST00000551079 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
GPN3-209ENST00000551079 CEP126Q9P2H0 1117 aa10.24□□□□□ -0.77
GPN3-209ENST00000551079 RAD21O60216 631 aa10.23□□□□□ -0.77
GPN3-209ENST00000551079 LILRA1O75019 489 aa10.23□□□□□ -0.77
GPN3-209ENST00000551079 WWC1Q8IX03 1113 aa10.23□□□□□ -0.77
GPN3-209ENST00000551079 SPINT1O43278 529 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 MAN1A2O60476 641 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 ADH1AP07327 375 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 RELBQ01201 579 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 AGBL1Q96MI9 1066 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
GPN3-209ENST00000551079 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
GPN3-209ENST00000551079 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.77
GPN3-209ENST00000551079 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
GPN3-209ENST00000551079 TTLL8A6PVC2 850 aa10.2□□□□□ -0.78
GPN3-209ENST00000551079 SOX11P35716 441 aa10.2□□□□□ -0.78
GPN3-209ENST00000551079 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
GPN3-209ENST00000551079 PCDHB11Q9Y5F2 797 aa10.2□□□□□ -0.78
GPN3-209ENST00000551079 TERTO14746 1132 aaKnown RBP10.19□□□□□ -0.78
GPN3-209ENST00000551079 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
GPN3-209ENST00000551079 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
GPN3-209ENST00000551079 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
GPN3-209ENST00000551079 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
GPN3-209ENST00000551079 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 PTGIRP43119 386 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 POM121Q96HA1 1249 aa10.18□□□□□ -0.78
GPN3-209ENST00000551079 ATP5J2-PTCD1G3V325 749 aa10.17□□□□□ -0.78
GPN3-209ENST00000551079 WFS1O76024 890 aa10.17□□□□□ -0.78
GPN3-209ENST00000551079 ZNF395Q9H8N7 513 aaPredicted RBP10.17□□□□□ -0.78
GPN3-209ENST00000551079 DNMT3LQ9UJW3 386 aa10.17□□□□□ -0.78
GPN3-209ENST00000551079 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
GPN3-209ENST00000551079 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.16□□□□□ -0.78
GPN3-209ENST00000551079 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
GPN3-209ENST00000551079 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
GPN3-209ENST00000551079 POLMQ9NP87 494 aaPredicted RBP10.16□□□□□ -0.78
GPN3-209ENST00000551079 CYP2U1Q7Z449 544 aa10.15□□□□□ -0.78
GPN3-209ENST00000551079 RNF135Q8IUD6 432 aa10.15□□□□□ -0.78
GPN3-209ENST00000551079 KDF1Q8NAX2 398 aaPredicted RBP10.15□□□□□ -0.78
GPN3-209ENST00000551079 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
GPN3-209ENST00000551079 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
GPN3-209ENST00000551079 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms