RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
ERBB3-215ENST00000550828 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
ERBB3-215ENST00000550828 POLKQ9UBT6 870 aa18.36■□□□□ 0.53
ERBB3-215ENST00000550828 CAMTA1Q9Y6Y1 1673 aa18.36■□□□□ 0.53
ERBB3-215ENST00000550828 COL3A1P02461 1466 aaPredicted RBP18.35■□□□□ 0.53
ERBB3-215ENST00000550828 ADAMTS2O95450 1211 aa18.35■□□□□ 0.53
ERBB3-215ENST00000550828 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
ERBB3-215ENST00000550828 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
ERBB3-215ENST00000550828 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
ERBB3-215ENST00000550828 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
ERBB3-215ENST00000550828 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
ERBB3-215ENST00000550828 RALBP1Q15311 655 aa18.33■□□□□ 0.52
ERBB3-215ENST00000550828 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.32■□□□□ 0.52
ERBB3-215ENST00000550828 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
ERBB3-215ENST00000550828 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 NGLY1Q96IV0 654 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 C8orf37Q96NL8 207 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 SLIT2O94813 1529 aa18.31■□□□□ 0.52
ERBB3-215ENST00000550828 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
ERBB3-215ENST00000550828 HOXC9P31274 260 aa18.3■□□□□ 0.52
ERBB3-215ENST00000550828 MTHFSP49914 203 aa18.3■□□□□ 0.52
ERBB3-215ENST00000550828 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
ERBB3-215ENST00000550828 FLT4P35916 1363 aa18.3■□□□□ 0.52
ERBB3-215ENST00000550828 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
ERBB3-215ENST00000550828 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
ERBB3-215ENST00000550828 ANP32CO43423 234 aa18.29■□□□□ 0.52
ERBB3-215ENST00000550828 CCDC184Q52MB2 194 aa18.29■□□□□ 0.52
ERBB3-215ENST00000550828 IP6K1Q92551 441 aa18.29■□□□□ 0.52
ERBB3-215ENST00000550828 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
ERBB3-215ENST00000550828 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
ERBB3-215ENST00000550828 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
ERBB3-215ENST00000550828 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
ERBB3-215ENST00000550828 AMPHP49418 695 aa18.27■□□□□ 0.52
ERBB3-215ENST00000550828 INSRP06213 1382 aa18.27■□□□□ 0.51
ERBB3-215ENST00000550828 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
ERBB3-215ENST00000550828 MIER1Q8N108 512 aa18.26■□□□□ 0.51
ERBB3-215ENST00000550828 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
ERBB3-215ENST00000550828 BTG4Q9NY30 223 aa18.24■□□□□ 0.51
ERBB3-215ENST00000550828 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
ERBB3-215ENST00000550828 ERBB3P21860 1342 aa18.23■□□□□ 0.51
ERBB3-215ENST00000550828 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
ERBB3-215ENST00000550828 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
ERBB3-215ENST00000550828 LTV1Q96GA3 475 aaPredicted RBP18.21■□□□□ 0.51
ERBB3-215ENST00000550828 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
ERBB3-215ENST00000550828 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
ERBB3-215ENST00000550828 IL13P35225 146 aa18.2■□□□□ 0.5
ERBB3-215ENST00000550828 GLI3P10071 1580 aa18.19■□□□□ 0.5
ERBB3-215ENST00000550828 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
ERBB3-215ENST00000550828 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
ERBB3-215ENST00000550828 USP21Q9UK80 565 aa18.19■□□□□ 0.5
ERBB3-215ENST00000550828 ATRNO75882 1429 aa18.18■□□□□ 0.5
ERBB3-215ENST00000550828 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
ERBB3-215ENST00000550828 WDR17Q8IZU2 1322 aa18.18■□□□□ 0.5
ERBB3-215ENST00000550828 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
ERBB3-215ENST00000550828 SHANK3Q9BYB0 1731 aa18.16■□□□□ 0.5
ERBB3-215ENST00000550828 EYA1Q99502 592 aa18.16■□□□□ 0.5
ERBB3-215ENST00000550828 CRB1P82279 1406 aa18.15■□□□□ 0.5
ERBB3-215ENST00000550828 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
ERBB3-215ENST00000550828 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
ERBB3-215ENST00000550828 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
ERBB3-215ENST00000550828 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
ERBB3-215ENST00000550828 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
ERBB3-215ENST00000550828 USHBP1Q8N6Y0 703 aa18.14■□□□□ 0.49
ERBB3-215ENST00000550828 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
ERBB3-215ENST00000550828 EVA1CP58658 441 aa18.13■□□□□ 0.49
ERBB3-215ENST00000550828 AEBP1Q8IUX7 1158 aa18.13■□□□□ 0.49
ERBB3-215ENST00000550828 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
ERBB3-215ENST00000550828 SPATA31A5Q5VU36 1347 aa18.13■□□□□ 0.49
ERBB3-215ENST00000550828 SPATA31A7Q8IWB4 1347 aa18.13■□□□□ 0.49
ERBB3-215ENST00000550828 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 VPS72Q15906 364 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 DISP2A7MBM2 1401 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 MEGF6O75095 1541 aa18.12■□□□□ 0.49
ERBB3-215ENST00000550828 CARD10Q9BWT7 1032 aa18.11■□□□□ 0.49
ERBB3-215ENST00000550828 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
ERBB3-215ENST00000550828 KDRP35968 1356 aa18.11■□□□□ 0.49
ERBB3-215ENST00000550828 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
ERBB3-215ENST00000550828 BRWD3Q6RI45 1802 aa18.11■□□□□ 0.49
ERBB3-215ENST00000550828 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
ERBB3-215ENST00000550828 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
ERBB3-215ENST00000550828 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
ERBB3-215ENST00000550828 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
ERBB3-215ENST00000550828 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
ERBB3-215ENST00000550828 HMOX1P09601 288 aa18.08■□□□□ 0.48
ERBB3-215ENST00000550828 SULT6B1Q6IMI4 303 aa18.07■□□□□ 0.48
ERBB3-215ENST00000550828 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
ERBB3-215ENST00000550828 U2AF1L5P0DN76 240 aaPredicted RBP18.06■□□□□ 0.48
ERBB3-215ENST00000550828 U2AF1Q01081 240 aaKnown RBP eCLIP18.06■□□□□ 0.48
ERBB3-215ENST00000550828 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
ERBB3-215ENST00000550828 LRP5O75197 1615 aa18.05■□□□□ 0.48
ERBB3-215ENST00000550828 GJD4Q96KN9 370 aaPredicted RBP18.05■□□□□ 0.48
ERBB3-215ENST00000550828 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
ERBB3-215ENST00000550828 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms