RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 AKAP12Q02952 1782 aa29.45■■■□□ 2.31
CACNB3-218ENST00000550771 KTN1Q86UP2 1357 aaKnown RBP29.45■■■□□ 2.31
CACNB3-218ENST00000550771 NBPF14Q5TI25 921 aa29.45■■■□□ 2.31
CACNB3-218ENST00000550771 CDCA7Q9BWT1 371 aaPredicted RBP29.45■■■□□ 2.31
CACNB3-218ENST00000550771 RREB1Q92766 1687 aa29.44■■■□□ 2.3
CACNB3-218ENST00000550771 CARD10Q9BWT7 1032 aa29.41■■■□□ 2.3
CACNB3-218ENST00000550771 CARD11Q9BXL7 1154 aa29.41■■■□□ 2.3
CACNB3-218ENST00000550771 PEAK1Q9H792 1746 aa29.41■■■□□ 2.3
CACNB3-218ENST00000550771 LRRC37A3O60309 1634 aa29.41■■■□□ 2.3
CACNB3-218ENST00000550771 SOX12O15370 315 aa29.4■■■□□ 2.3
CACNB3-218ENST00000550771 NUP188Q5SRE5 1749 aa29.39■■■□□ 2.3
CACNB3-218ENST00000550771 NFAT5O94916 1531 aa29.39■■■□□ 2.3
CACNB3-218ENST00000550771 PLSCR1O15162 318 aa29.38■■■□□ 2.29
CACNB3-218ENST00000550771 CSB-PGBD3P0DP91 1061 aa29.38■■■□□ 2.29
CACNB3-218ENST00000550771 USP31Q70CQ4 1352 aa29.38■■■□□ 2.29
CACNB3-218ENST00000550771 BCL9O00512 1426 aa29.37■■■□□ 2.29
CACNB3-218ENST00000550771 BCL11BQ9C0K0 894 aaPredicted RBP29.37■■■□□ 2.29
CACNB3-218ENST00000550771 ABCC6O95255 1503 aa29.36■■■□□ 2.29
CACNB3-218ENST00000550771 MARCH10Q8NA82 808 aaPredicted RBP29.35■■■□□ 2.29
CACNB3-218ENST00000550771 MON2Q7Z3U7 1717 aa29.34■■■□□ 2.29
CACNB3-218ENST00000550771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.34■■■□□ 2.29
CACNB3-218ENST00000550771 CCDC7Q96M83 1385 aa29.33■■■□□ 2.29
CACNB3-218ENST00000550771 CD163L1Q9NR16 1453 aa29.33■■■□□ 2.29
CACNB3-218ENST00000550771 TONSLQ96HA7 1378 aa29.32■■■□□ 2.28
CACNB3-218ENST00000550771 WNK3Q9BYP7 1800 aa29.31■■■□□ 2.28
CACNB3-218ENST00000550771 TMC1Q8TDI8 760 aa29.31■■■□□ 2.28
CACNB3-218ENST00000550771 PUS7Q96PZ0 661 aaKnown RBP29.31■■■□□ 2.28
CACNB3-218ENST00000550771 RGPD3A6NKT7 1758 aaPredicted RBP29.31■■■□□ 2.28
CACNB3-218ENST00000550771 RGPD4Q7Z3J3 1758 aa29.31■■■□□ 2.28
CACNB3-218ENST00000550771 HDGFL2Q7Z4V5 671 aaPredicted RBP29.3■■■□□ 2.28
CACNB3-218ENST00000550771 SBF2Q86WG5 1849 aa29.29■■■□□ 2.28
CACNB3-218ENST00000550771 EXOC5O00471 708 aa29.29■■■□□ 2.28
CACNB3-218ENST00000550771 NME9Q86XW9 330 aa29.29■■■□□ 2.28
CACNB3-218ENST00000550771 SLC12A5Q9H2X9 1139 aa29.29■■■□□ 2.28
CACNB3-218ENST00000550771 RGPD5Q99666 1765 aa29.29■■■□□ 2.28
CACNB3-218ENST00000550771 PTF1AQ7RTS3 328 aa29.28■■■□□ 2.28
CACNB3-218ENST00000550771 USP54Q70EL1 1684 aa29.28■■■□□ 2.28
CACNB3-218ENST00000550771 ERBB3P21860 1342 aa29.26■■■□□ 2.27
CACNB3-218ENST00000550771 SPON1Q9HCB6 807 aa29.26■■■□□ 2.27
CACNB3-218ENST00000550771 TERF2IPQ9NYB0 399 aa29.26■■■□□ 2.27
CACNB3-218ENST00000550771 EDC4Q6P2E9 1401 aaKnown RBP29.26■■■□□ 2.27
CACNB3-218ENST00000550771 KCNQ2O43526 872 aa29.24■■■□□ 2.27
CACNB3-218ENST00000550771 TNS2Q63HR2 1409 aa29.23■■■□□ 2.27
CACNB3-218ENST00000550771 PROM2Q8N271 834 aa29.23■■■□□ 2.27
CACNB3-218ENST00000550771 ANO8Q9HCE9 1232 aaPredicted RBP29.22■■■□□ 2.27
CACNB3-218ENST00000550771 A0A1W2PP64 1363 aa29.22■■■□□ 2.27
CACNB3-218ENST00000550771 NLRP2Q9NX02 1062 aa29.2■■■□□ 2.26
CACNB3-218ENST00000550771 NINLQ9Y2I6 1382 aa29.19■■■□□ 2.26
CACNB3-218ENST00000550771 SLC24A1O60721 1099 aa29.18■■■□□ 2.26
CACNB3-218ENST00000550771 TESK2Q96S53 571 aa29.18■■■□□ 2.26
CACNB3-218ENST00000550771 IL2RBP14784 551 aa29.17■■■□□ 2.26
CACNB3-218ENST00000550771 ANKRD24Q8TF21 1146 aa29.17■■■□□ 2.26
CACNB3-218ENST00000550771 PPP1R1BQ9UD71 204 aaPredicted RBP29.17■■■□□ 2.26
CACNB3-218ENST00000550771 TXNRD1Q16881 649 aa29.16■■■□□ 2.26
CACNB3-218ENST00000550771 ST20-MTHFSA0A0A6YYL1 179 aa29.14■■■□□ 2.26
CACNB3-218ENST00000550771 LTN1O94822 1766 aa29.13■■■□□ 2.25
CACNB3-218ENST00000550771 IP6K1Q92551 441 aa29.12■■■□□ 2.25
CACNB3-218ENST00000550771 STK32BQ9NY57 414 aa29.11■■■□□ 2.25
CACNB3-218ENST00000550771 CASZ1Q86V15 1759 aa29.1■■■□□ 2.25
CACNB3-218ENST00000550771 SLC15A2Q16348 729 aa29.08■■■□□ 2.25
CACNB3-218ENST00000550771 ACSBG1Q96GR2 724 aa29.08■■■□□ 2.25
CACNB3-218ENST00000550771 PDGFDQ9GZP0 370 aaPredicted RBP29.08■■■□□ 2.25
CACNB3-218ENST00000550771 NHSQ6T4R5 1651 aa29.08■■■□□ 2.25
CACNB3-218ENST00000550771 COG3Q96JB2 828 aa29.07■■■□□ 2.24
CACNB3-218ENST00000550771 ZBTB7AO95365 584 aa29.04■■■□□ 2.24
CACNB3-218ENST00000550771 ANKRD36BQ8N2N9 1353 aa29.03■■■□□ 2.24
CACNB3-218ENST00000550771 MAP3K19Q56UN5 1328 aa29.02■■■□□ 2.24
CACNB3-218ENST00000550771 DCAF8L1A6NGE4 600 aa29.02■■■□□ 2.24
CACNB3-218ENST00000550771 PTGER2P43116 358 aa29.01■■■□□ 2.23
CACNB3-218ENST00000550771 LTV1Q96GA3 475 aaPredicted RBP29.01■■■□□ 2.23
CACNB3-218ENST00000550771 HOXC9P31274 260 aa29■■■□□ 2.23
CACNB3-218ENST00000550771 AMPHP49418 695 aa28.99■■■□□ 2.23
CACNB3-218ENST00000550771 TMF1P82094 1093 aa28.99■■■□□ 2.23
CACNB3-218ENST00000550771 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
CACNB3-218ENST00000550771 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
CACNB3-218ENST00000550771 MTFR1LQ9H019 292 aa28.98■■■□□ 2.23
CACNB3-218ENST00000550771 ATF5Q9Y2D1 282 aaPredicted RBP28.98■■■□□ 2.23
CACNB3-218ENST00000550771 YY1P25490 414 aa28.97■■■□□ 2.23
CACNB3-218ENST00000550771 DDX54Q8TDD1 881 aaKnown RBP28.97■■■□□ 2.23
CACNB3-218ENST00000550771 USP47Q96K76 1375 aa28.96■■■□□ 2.23
CACNB3-218ENST00000550771 FBLN1P23142 703 aa28.95■■■□□ 2.22
CACNB3-218ENST00000550771 BTAF1O14981 1849 aa28.94■■■□□ 2.22
CACNB3-218ENST00000550771 RTL1A6NKG5 1358 aa28.94■■■□□ 2.22
CACNB3-218ENST00000550771 PAPPAQ13219 1627 aa28.94■■■□□ 2.22
CACNB3-218ENST00000550771 FYB1O15117 783 aa28.93■■■□□ 2.22
CACNB3-218ENST00000550771 SLC27A3Q5K4L6 730 aa28.92■■■□□ 2.22
CACNB3-218ENST00000550771 SGIP1Q9BQI5 828 aa28.92■■■□□ 2.22
CACNB3-218ENST00000550771 LRRC4BQ9NT99 713 aa28.92■■■□□ 2.22
CACNB3-218ENST00000550771 CDCA8Q53HL2 280 aa28.91■■■□□ 2.22
CACNB3-218ENST00000550771 MYOM1P52179 1685 aa28.9■■■□□ 2.22
CACNB3-218ENST00000550771 RRS1Q15050 365 aaKnown RBP28.89■■■□□ 2.22
CACNB3-218ENST00000550771 ZNF827Q17R98 1081 aa28.89■■■□□ 2.22
CACNB3-218ENST00000550771 ZCRB1Q8TBF4 217 aaKnown RBP28.89■■■□□ 2.22
CACNB3-218ENST00000550771 GGNBP2Q9H3C7 697 aa28.89■■■□□ 2.22
CACNB3-218ENST00000550771 SYT17Q9BSW7 474 aa28.87■■■□□ 2.21
CACNB3-218ENST00000550771 FHDC1Q9C0D6 1143 aaPredicted RBP28.87■■■□□ 2.21
CACNB3-218ENST00000550771 KAT6BQ8WYB5 2073 aa28.87■■■□□ 2.21
CACNB3-218ENST00000550771 MEGF6O75095 1541 aa28.86■■■□□ 2.21
CACNB3-218ENST00000550771 PRIM1P49642 420 aaKnown RBP28.86■■■□□ 2.21
CACNB3-218ENST00000550771 AKT1S1Q96B36 256 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms