RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 PLSCR1O15162 318 aa20.23■□□□□ 0.83
TPCN1-213ENST00000550543 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
TPCN1-213ENST00000550543 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
TPCN1-213ENST00000550543 BCL9O00512 1426 aa20.22■□□□□ 0.83
TPCN1-213ENST00000550543 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
TPCN1-213ENST00000550543 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
TPCN1-213ENST00000550543 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
TPCN1-213ENST00000550543 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
TPCN1-213ENST00000550543 DCAF8L1A6NGE4 600 aa20.2■□□□□ 0.82
TPCN1-213ENST00000550543 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
TPCN1-213ENST00000550543 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
TPCN1-213ENST00000550543 RREB1Q92766 1687 aa20.19■□□□□ 0.82
TPCN1-213ENST00000550543 EXOC5O00471 708 aa20.18■□□□□ 0.82
TPCN1-213ENST00000550543 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
TPCN1-213ENST00000550543 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
TPCN1-213ENST00000550543 PPP1R1BQ9UD71 204 aaPredicted RBP20.18■□□□□ 0.82
TPCN1-213ENST00000550543 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
TPCN1-213ENST00000550543 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
TPCN1-213ENST00000550543 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
TPCN1-213ENST00000550543 TERF2IPQ9NYB0 399 aa20.16■□□□□ 0.82
TPCN1-213ENST00000550543 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
TPCN1-213ENST00000550543 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
TPCN1-213ENST00000550543 KCNQ2O43526 872 aa20.15■□□□□ 0.82
TPCN1-213ENST00000550543 LRRC37A3O60309 1634 aa20.15■□□□□ 0.82
TPCN1-213ENST00000550543 AKAP12Q02952 1782 aa20.14■□□□□ 0.81
TPCN1-213ENST00000550543 NUP188Q5SRE5 1749 aa20.14■□□□□ 0.81
TPCN1-213ENST00000550543 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
TPCN1-213ENST00000550543 SOX12O15370 315 aa20.14■□□□□ 0.81
TPCN1-213ENST00000550543 COL18A1P39060 1754 aa20.13■□□□□ 0.81
TPCN1-213ENST00000550543 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
TPCN1-213ENST00000550543 NINLQ9Y2I6 1382 aa20.13■□□□□ 0.81
TPCN1-213ENST00000550543 NFAT5O94916 1531 aa20.12■□□□□ 0.81
TPCN1-213ENST00000550543 MARCH10Q8NA82 808 aaPredicted RBP20.12■□□□□ 0.81
TPCN1-213ENST00000550543 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
TPCN1-213ENST00000550543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.11■□□□□ 0.81
TPCN1-213ENST00000550543 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
TPCN1-213ENST00000550543 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
TPCN1-213ENST00000550543 ERBB3P21860 1342 aa20.09■□□□□ 0.81
TPCN1-213ENST00000550543 STK32BQ9NY57 414 aa20.09■□□□□ 0.81
TPCN1-213ENST00000550543 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
TPCN1-213ENST00000550543 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
TPCN1-213ENST00000550543 IL2RBP14784 551 aa20.07■□□□□ 0.8
TPCN1-213ENST00000550543 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
TPCN1-213ENST00000550543 USP54Q70EL1 1684 aa20.06■□□□□ 0.8
TPCN1-213ENST00000550543 TXNRD1Q16881 649 aa20.05■□□□□ 0.8
TPCN1-213ENST00000550543 NME9Q86XW9 330 aa20.05■□□□□ 0.8
TPCN1-213ENST00000550543 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
TPCN1-213ENST00000550543 ANKRD24Q8TF21 1146 aa20.03■□□□□ 0.8
TPCN1-213ENST00000550543 SLC12A5Q9H2X9 1139 aa20.03■□□□□ 0.8
TPCN1-213ENST00000550543 ANO8Q9HCE9 1232 aaPredicted RBP20.02■□□□□ 0.8
TPCN1-213ENST00000550543 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
TPCN1-213ENST00000550543 A0A1W2PP64 1363 aa20.01■□□□□ 0.79
TPCN1-213ENST00000550543 SLC15A2Q16348 729 aa20.01■□□□□ 0.79
TPCN1-213ENST00000550543 YY1P25490 414 aa20■□□□□ 0.79
TPCN1-213ENST00000550543 PROM2Q8N271 834 aa20■□□□□ 0.79
TPCN1-213ENST00000550543 IP6K1Q92551 441 aa20■□□□□ 0.79
TPCN1-213ENST00000550543 COG3Q96JB2 828 aa20■□□□□ 0.79
TPCN1-213ENST00000550543 HMGB2P26583 209 aaKnown RBP19.98■□□□□ 0.79
TPCN1-213ENST00000550543 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
TPCN1-213ENST00000550543 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
TPCN1-213ENST00000550543 PTF1AQ7RTS3 328 aa19.97■□□□□ 0.79
TPCN1-213ENST00000550543 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
TPCN1-213ENST00000550543 NHSQ6T4R5 1651 aa19.96■□□□□ 0.79
TPCN1-213ENST00000550543 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
TPCN1-213ENST00000550543 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
TPCN1-213ENST00000550543 CASZ1Q86V15 1759 aa19.94■□□□□ 0.78
TPCN1-213ENST00000550543 AMPHP49418 695 aa19.94■□□□□ 0.78
TPCN1-213ENST00000550543 ACSBG1Q96GR2 724 aa19.94■□□□□ 0.78
TPCN1-213ENST00000550543 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
TPCN1-213ENST00000550543 LTN1O94822 1766 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 TMF1P82094 1093 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 TESK2Q96S53 571 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 ANKRD36BQ8N2N9 1353 aa19.93■□□□□ 0.78
TPCN1-213ENST00000550543 CGNL1Q0VF96 1302 aa19.92■□□□□ 0.78
TPCN1-213ENST00000550543 PTGER2P43116 358 aa19.91■□□□□ 0.78
TPCN1-213ENST00000550543 SLC16A10Q8TF71 515 aa19.91■□□□□ 0.78
TPCN1-213ENST00000550543 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
TPCN1-213ENST00000550543 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
TPCN1-213ENST00000550543 MAP3K19Q56UN5 1328 aa19.89■□□□□ 0.77
TPCN1-213ENST00000550543 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.77
TPCN1-213ENST00000550543 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
TPCN1-213ENST00000550543 HOXC9P31274 260 aa19.88■□□□□ 0.77
TPCN1-213ENST00000550543 ZCRB1Q8TBF4 217 aaKnown RBP19.87■□□□□ 0.77
TPCN1-213ENST00000550543 KIF24Q5T7B8 1368 aa19.86■□□□□ 0.77
TPCN1-213ENST00000550543 MAP3K5Q99683 1374 aa19.86■□□□□ 0.77
TPCN1-213ENST00000550543 ARXQ96QS3 562 aa19.86■□□□□ 0.77
TPCN1-213ENST00000550543 SYT17Q9BSW7 474 aa19.86■□□□□ 0.77
TPCN1-213ENST00000550543 PDGFDQ9GZP0 370 aaPredicted RBP19.86■□□□□ 0.77
TPCN1-213ENST00000550543 POLD1P28340 1107 aa19.85■□□□□ 0.77
TPCN1-213ENST00000550543 FHDC1Q9C0D6 1143 aaPredicted RBP19.85■□□□□ 0.77
TPCN1-213ENST00000550543 USP47Q96K76 1375 aa19.84■□□□□ 0.77
TPCN1-213ENST00000550543 RAPGEF4Q8WZA2 1011 aa19.84■□□□□ 0.77
TPCN1-213ENST00000550543 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
TPCN1-213ENST00000550543 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
TPCN1-213ENST00000550543 BTAF1O14981 1849 aa19.83■□□□□ 0.76
TPCN1-213ENST00000550543 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
TPCN1-213ENST00000550543 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
TPCN1-213ENST00000550543 PAPPAQ13219 1627 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms