RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RREB1Q92766 1687 aa30.96■■■□□ 2.55
SMARCC2-210ENST00000550519 AKAP12Q02952 1782 aa30.95■■■□□ 2.55
SMARCC2-210ENST00000550519 KTN1Q86UP2 1357 aaKnown RBP30.94■■■□□ 2.54
SMARCC2-210ENST00000550519 PEAK1Q9H792 1746 aa30.93■■■□□ 2.54
SMARCC2-210ENST00000550519 NBPF14Q5TI25 921 aa30.92■■■□□ 2.54
SMARCC2-210ENST00000550519 LRRC37A3O60309 1634 aa30.91■■■□□ 2.54
SMARCC2-210ENST00000550519 NUP188Q5SRE5 1749 aa30.91■■■□□ 2.54
SMARCC2-210ENST00000550519 SOX12O15370 315 aa30.91■■■□□ 2.54
SMARCC2-210ENST00000550519 CDCA7Q9BWT1 371 aaPredicted RBP30.91■■■□□ 2.54
SMARCC2-210ENST00000550519 CARD10Q9BWT7 1032 aa30.9■■■□□ 2.54
SMARCC2-210ENST00000550519 CARD11Q9BXL7 1154 aa30.9■■■□□ 2.54
SMARCC2-210ENST00000550519 NFAT5O94916 1531 aa30.89■■■□□ 2.54
SMARCC2-210ENST00000550519 PLSCR1O15162 318 aa30.88■■■□□ 2.53
SMARCC2-210ENST00000550519 MARCH10Q8NA82 808 aaPredicted RBP30.87■■■□□ 2.53
SMARCC2-210ENST00000550519 USP31Q70CQ4 1352 aa30.87■■■□□ 2.53
SMARCC2-210ENST00000550519 CSB-PGBD3P0DP91 1061 aa30.86■■■□□ 2.53
SMARCC2-210ENST00000550519 BCL9O00512 1426 aa30.86■■■□□ 2.53
SMARCC2-210ENST00000550519 CD163L1Q9NR16 1453 aa30.85■■■□□ 2.53
SMARCC2-210ENST00000550519 BCL11BQ9C0K0 894 aaPredicted RBP30.85■■■□□ 2.53
SMARCC2-210ENST00000550519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.84■■■□□ 2.53
SMARCC2-210ENST00000550519 MON2Q7Z3U7 1717 aa30.84■■■□□ 2.53
SMARCC2-210ENST00000550519 PTF1AQ7RTS3 328 aa30.83■■■□□ 2.53
SMARCC2-210ENST00000550519 ABCC6O95255 1503 aa30.83■■■□□ 2.53
SMARCC2-210ENST00000550519 WNK3Q9BYP7 1800 aa30.82■■■□□ 2.52
SMARCC2-210ENST00000550519 RGPD5Q99666 1765 aa30.82■■■□□ 2.52
SMARCC2-210ENST00000550519 SBF2Q86WG5 1849 aa30.81■■■□□ 2.52
SMARCC2-210ENST00000550519 CCDC7Q96M83 1385 aa30.8■■■□□ 2.52
SMARCC2-210ENST00000550519 NME9Q86XW9 330 aa30.8■■■□□ 2.52
SMARCC2-210ENST00000550519 TMC1Q8TDI8 760 aa30.79■■■□□ 2.52
SMARCC2-210ENST00000550519 SLC12A5Q9H2X9 1139 aa30.79■■■□□ 2.52
SMARCC2-210ENST00000550519 RGPD3A6NKT7 1758 aaPredicted RBP30.79■■■□□ 2.52
SMARCC2-210ENST00000550519 RGPD4Q7Z3J3 1758 aa30.79■■■□□ 2.52
SMARCC2-210ENST00000550519 TONSLQ96HA7 1378 aa30.79■■■□□ 2.52
SMARCC2-210ENST00000550519 EXOC5O00471 708 aa30.78■■■□□ 2.52
SMARCC2-210ENST00000550519 HDGFL2Q7Z4V5 671 aaPredicted RBP30.78■■■□□ 2.52
SMARCC2-210ENST00000550519 PUS7Q96PZ0 661 aaKnown RBP30.77■■■□□ 2.52
SMARCC2-210ENST00000550519 PROM2Q8N271 834 aa30.76■■■□□ 2.51
SMARCC2-210ENST00000550519 USP54Q70EL1 1684 aa30.76■■■□□ 2.51
SMARCC2-210ENST00000550519 ERBB3P21860 1342 aa30.75■■■□□ 2.51
SMARCC2-210ENST00000550519 EDC4Q6P2E9 1401 aaKnown RBP30.74■■■□□ 2.51
SMARCC2-210ENST00000550519 SPON1Q9HCB6 807 aa30.74■■■□□ 2.51
SMARCC2-210ENST00000550519 ANO8Q9HCE9 1232 aaPredicted RBP30.74■■■□□ 2.51
SMARCC2-210ENST00000550519 KCNQ2O43526 872 aa30.73■■■□□ 2.51
SMARCC2-210ENST00000550519 TERF2IPQ9NYB0 399 aa30.73■■■□□ 2.51
SMARCC2-210ENST00000550519 TNS2Q63HR2 1409 aa30.72■■■□□ 2.51
SMARCC2-210ENST00000550519 A0A1W2PP64 1363 aa30.71■■■□□ 2.51
SMARCC2-210ENST00000550519 NLRP2Q9NX02 1062 aa30.7■■■□□ 2.51
SMARCC2-210ENST00000550519 TESK2Q96S53 571 aa30.68■■■□□ 2.5
SMARCC2-210ENST00000550519 TXNRD1Q16881 649 aa30.66■■■□□ 2.5
SMARCC2-210ENST00000550519 ANKRD24Q8TF21 1146 aa30.66■■■□□ 2.5
SMARCC2-210ENST00000550519 IL2RBP14784 551 aa30.65■■■□□ 2.5
SMARCC2-210ENST00000550519 ST20-MTHFSA0A0A6YYL1 179 aa30.64■■■□□ 2.5
SMARCC2-210ENST00000550519 PPP1R1BQ9UD71 204 aaPredicted RBP30.64■■■□□ 2.5
SMARCC2-210ENST00000550519 NINLQ9Y2I6 1382 aa30.63■■■□□ 2.49
SMARCC2-210ENST00000550519 LTN1O94822 1766 aa30.62■■■□□ 2.49
SMARCC2-210ENST00000550519 PDGFDQ9GZP0 370 aaPredicted RBP30.61■■■□□ 2.49
SMARCC2-210ENST00000550519 SLC24A1O60721 1099 aa30.6■■■□□ 2.49
SMARCC2-210ENST00000550519 IP6K1Q92551 441 aa30.6■■■□□ 2.49
SMARCC2-210ENST00000550519 CASZ1Q86V15 1759 aa30.59■■■□□ 2.49
SMARCC2-210ENST00000550519 ACSBG1Q96GR2 724 aa30.58■■■□□ 2.49
SMARCC2-210ENST00000550519 STK32BQ9NY57 414 aa30.58■■■□□ 2.49
SMARCC2-210ENST00000550519 SLC15A2Q16348 729 aa30.57■■■□□ 2.48
SMARCC2-210ENST00000550519 NHSQ6T4R5 1651 aa30.56■■■□□ 2.48
SMARCC2-210ENST00000550519 COG3Q96JB2 828 aa30.54■■■□□ 2.48
SMARCC2-210ENST00000550519 ZBTB7AO95365 584 aa30.53■■■□□ 2.48
SMARCC2-210ENST00000550519 MAP3K19Q56UN5 1328 aa30.51■■■□□ 2.48
SMARCC2-210ENST00000550519 PTGER2P43116 358 aa30.51■■■□□ 2.47
SMARCC2-210ENST00000550519 LTV1Q96GA3 475 aaPredicted RBP30.5■■■□□ 2.47
SMARCC2-210ENST00000550519 ANKRD36BQ8N2N9 1353 aa30.5■■■□□ 2.47
SMARCC2-210ENST00000550519 HOXC9P31274 260 aa30.49■■■□□ 2.47
SMARCC2-210ENST00000550519 FBLN1P23142 703 aa30.48■■■□□ 2.47
SMARCC2-210ENST00000550519 ATF5Q9Y2D1 282 aaPredicted RBP30.48■■■□□ 2.47
SMARCC2-210ENST00000550519 YY1P25490 414 aa30.45■■■□□ 2.47
SMARCC2-210ENST00000550519 AMPHP49418 695 aa30.45■■■□□ 2.47
SMARCC2-210ENST00000550519 DDX54Q8TDD1 881 aaKnown RBP30.45■■■□□ 2.47
SMARCC2-210ENST00000550519 FAM208AQ9UK61 1670 aaKnown RBP30.45■■■□□ 2.46
SMARCC2-210ENST00000550519 DCAF8L1A6NGE4 600 aa30.44■■■□□ 2.46
SMARCC2-210ENST00000550519 TMF1P82094 1093 aa30.44■■■□□ 2.46
SMARCC2-210ENST00000550519 TRIM26Q12899 539 aaPredicted RBP30.44■■■□□ 2.46
SMARCC2-210ENST00000550519 MTFR1LQ9H019 292 aa30.44■■■□□ 2.46
SMARCC2-210ENST00000550519 PAPPAQ13219 1627 aa30.44■■■□□ 2.46
SMARCC2-210ENST00000550519 BTAF1O14981 1849 aa30.43■■■□□ 2.46
SMARCC2-210ENST00000550519 LRRC4BQ9NT99 713 aa30.43■■■□□ 2.46
SMARCC2-210ENST00000550519 USP47Q96K76 1375 aa30.42■■■□□ 2.46
SMARCC2-210ENST00000550519 FYB1O15117 783 aa30.42■■■□□ 2.46
SMARCC2-210ENST00000550519 SGIP1Q9BQI5 828 aa30.42■■■□□ 2.46
SMARCC2-210ENST00000550519 RTL1A6NKG5 1358 aa30.4■■■□□ 2.46
SMARCC2-210ENST00000550519 MYOM1P52179 1685 aa30.39■■■□□ 2.46
SMARCC2-210ENST00000550519 ZNF827Q17R98 1081 aa30.39■■■□□ 2.46
SMARCC2-210ENST00000550519 RRS1Q15050 365 aaKnown RBP30.38■■■□□ 2.45
SMARCC2-210ENST00000550519 GGNBP2Q9H3C7 697 aa30.38■■■□□ 2.45
SMARCC2-210ENST00000550519 KAT6BQ8WYB5 2073 aa30.36■■■□□ 2.45
SMARCC2-210ENST00000550519 SLC27A3Q5K4L6 730 aa30.36■■■□□ 2.45
SMARCC2-210ENST00000550519 ZCRB1Q8TBF4 217 aaKnown RBP30.36■■■□□ 2.45
SMARCC2-210ENST00000550519 FHDC1Q9C0D6 1143 aaPredicted RBP30.36■■■□□ 2.45
SMARCC2-210ENST00000550519 NBPF6Q5VWK0 638 aa30.35■■■□□ 2.45
SMARCC2-210ENST00000550519 NBPF4Q96M43 638 aa30.35■■■□□ 2.45
SMARCC2-210ENST00000550519 SYT17Q9BSW7 474 aa30.35■■■□□ 2.45
SMARCC2-210ENST00000550519 MEGF6O75095 1541 aa30.35■■■□□ 2.45
SMARCC2-210ENST00000550519 PRIM1P49642 420 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms