RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 MARCH10Q8NA82 808 aaPredicted RBP24.62■■□□□ 1.53
HCFC2-205ENST00000550444 ZNF692Q9BU19 519 aaPredicted RBP24.62■■□□□ 1.53
HCFC2-205ENST00000550444 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
HCFC2-205ENST00000550444 ARHGEF25Q86VW2 580 aa24.61■■□□□ 1.53
HCFC2-205ENST00000550444 KCNH5Q8NCM2 988 aa24.61■■□□□ 1.53
HCFC2-205ENST00000550444 ANO8Q9HCE9 1232 aaPredicted RBP24.61■■□□□ 1.53
HCFC2-205ENST00000550444 SIN3AQ96ST3 1273 aa24.6■■□□□ 1.53
HCFC2-205ENST00000550444 CDCA7Q9BWT1 371 aaPredicted RBP24.6■■□□□ 1.53
HCFC2-205ENST00000550444 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
HCFC2-205ENST00000550444 CARD10Q9BWT7 1032 aa24.58■■□□□ 1.53
HCFC2-205ENST00000550444 CPSF1Q10570 1443 aaKnown RBP24.58■■□□□ 1.53
HCFC2-205ENST00000550444 EXOC5O00471 708 aa24.57■■□□□ 1.52
HCFC2-205ENST00000550444 PEAK1Q9H792 1746 aa24.57■■□□□ 1.52
HCFC2-205ENST00000550444 LRRC37A3O60309 1634 aa24.57■■□□□ 1.52
HCFC2-205ENST00000550444 PIK3C2AO00443 1686 aa24.56■■□□□ 1.52
HCFC2-205ENST00000550444 ROCK2O75116 1388 aaKnown RBP24.56■■□□□ 1.52
HCFC2-205ENST00000550444 PROM2Q8N271 834 aa24.56■■□□□ 1.52
HCFC2-205ENST00000550444 PDGFDQ9GZP0 370 aaPredicted RBP24.55■■□□□ 1.52
HCFC2-205ENST00000550444 TTC21AQ8NDW8 1320 aa24.55■■□□□ 1.52
HCFC2-205ENST00000550444 COL18A1P39060 1754 aa24.54■■□□□ 1.52
HCFC2-205ENST00000550444 ZBTB7AO95365 584 aa24.54■■□□□ 1.52
HCFC2-205ENST00000550444 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
HCFC2-205ENST00000550444 KTN1Q86UP2 1357 aaKnown RBP24.53■■□□□ 1.52
HCFC2-205ENST00000550444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.52■■□□□ 1.52
HCFC2-205ENST00000550444 TXNRD1Q16881 649 aa24.51■■□□□ 1.51
HCFC2-205ENST00000550444 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
HCFC2-205ENST00000550444 ATF5Q9Y2D1 282 aaPredicted RBP24.51■■□□□ 1.51
HCFC2-205ENST00000550444 TRPM1Q7Z4N2 1603 aa24.5■■□□□ 1.51
HCFC2-205ENST00000550444 SBF2Q86WG5 1849 aa24.49■■□□□ 1.51
HCFC2-205ENST00000550444 BCL9O00512 1426 aa24.49■■□□□ 1.51
HCFC2-205ENST00000550444 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
HCFC2-205ENST00000550444 ACSBG1Q96GR2 724 aa24.47■■□□□ 1.51
HCFC2-205ENST00000550444 NLRP2Q9NX02 1062 aa24.47■■□□□ 1.51
HCFC2-205ENST00000550444 SLC15A2Q16348 729 aa24.46■■□□□ 1.51
HCFC2-205ENST00000550444 TMC1Q8TDI8 760 aa24.46■■□□□ 1.51
HCFC2-205ENST00000550444 RGPD3A6NKT7 1758 aaPredicted RBP24.46■■□□□ 1.51
HCFC2-205ENST00000550444 RGPD4Q7Z3J3 1758 aa24.46■■□□□ 1.51
HCFC2-205ENST00000550444 RGPD5Q99666 1765 aa24.44■■□□□ 1.5
HCFC2-205ENST00000550444 PTGER2P43116 358 aa24.44■■□□□ 1.5
HCFC2-205ENST00000550444 NME9Q86XW9 330 aa24.44■■□□□ 1.5
HCFC2-205ENST00000550444 NFAT5O94916 1531 aa24.43■■□□□ 1.5
HCFC2-205ENST00000550444 WNK3Q9BYP7 1800 aa24.42■■□□□ 1.5
HCFC2-205ENST00000550444 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
HCFC2-205ENST00000550444 TNS2Q63HR2 1409 aa24.41■■□□□ 1.5
HCFC2-205ENST00000550444 CASZ1Q86V15 1759 aa24.4■■□□□ 1.5
HCFC2-205ENST00000550444 IL2RBP14784 551 aa24.4■■□□□ 1.5
HCFC2-205ENST00000550444 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
HCFC2-205ENST00000550444 CARD11Q9BXL7 1154 aa24.4■■□□□ 1.5
HCFC2-205ENST00000550444 ERBB3P21860 1342 aa24.39■■□□□ 1.5
HCFC2-205ENST00000550444 ANKRD24Q8TF21 1146 aa24.39■■□□□ 1.49
HCFC2-205ENST00000550444 USP31Q70CQ4 1352 aa24.39■■□□□ 1.49
HCFC2-205ENST00000550444 FHDC1Q9C0D6 1143 aaPredicted RBP24.38■■□□□ 1.49
HCFC2-205ENST00000550444 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
HCFC2-205ENST00000550444 SLC12A5Q9H2X9 1139 aa24.38■■□□□ 1.49
HCFC2-205ENST00000550444 SYT17Q9BSW7 474 aa24.36■■□□□ 1.49
HCFC2-205ENST00000550444 SBNO2Q9Y2G9 1366 aa24.35■■□□□ 1.49
HCFC2-205ENST00000550444 ABCC6O95255 1503 aa24.34■■□□□ 1.49
HCFC2-205ENST00000550444 MYOM1P52179 1685 aa24.34■■□□□ 1.49
HCFC2-205ENST00000550444 LTV1Q96GA3 475 aaPredicted RBP24.33■■□□□ 1.49
HCFC2-205ENST00000550444 CD163L1Q9NR16 1453 aa24.32■■□□□ 1.48
HCFC2-205ENST00000550444 DDX54Q8TDD1 881 aaKnown RBP24.32■■□□□ 1.48
HCFC2-205ENST00000550444 TERF2IPQ9NYB0 399 aa24.32■■□□□ 1.48
HCFC2-205ENST00000550444 MON2Q7Z3U7 1717 aa24.31■■□□□ 1.48
HCFC2-205ENST00000550444 ARXQ96QS3 562 aa24.31■■□□□ 1.48
HCFC2-205ENST00000550444 SGIP1Q9BQI5 828 aa24.3■■□□□ 1.48
HCFC2-205ENST00000550444 LRRC4BQ9NT99 713 aa24.29■■□□□ 1.48
HCFC2-205ENST00000550444 EDC4Q6P2E9 1401 aaKnown RBP24.28■■□□□ 1.48
HCFC2-205ENST00000550444 NHSQ6T4R5 1651 aa24.28■■□□□ 1.48
HCFC2-205ENST00000550444 ZNF827Q17R98 1081 aa24.28■■□□□ 1.48
HCFC2-205ENST00000550444 ZNF784Q8NCA9 323 aaPredicted RBP24.27■■□□□ 1.48
HCFC2-205ENST00000550444 IP6K1Q92551 441 aa24.27■■□□□ 1.48
HCFC2-205ENST00000550444 A0A1W2PP64 1363 aa24.26■■□□□ 1.47
HCFC2-205ENST00000550444 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
HCFC2-205ENST00000550444 KLHL34Q8N239 644 aa24.24■■□□□ 1.47
HCFC2-205ENST00000550444 LTN1O94822 1766 aa24.23■■□□□ 1.47
HCFC2-205ENST00000550444 KAT6BQ8WYB5 2073 aa24.22■■□□□ 1.47
HCFC2-205ENST00000550444 FBLN1P23142 703 aa24.22■■□□□ 1.47
HCFC2-205ENST00000550444 KCNQ4P56696 695 aa24.22■■□□□ 1.47
HCFC2-205ENST00000550444 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
HCFC2-205ENST00000550444 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 AMPHP49418 695 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 PRIM1P49642 420 aaKnown RBP24.21■■□□□ 1.47
HCFC2-205ENST00000550444 SLC27A3Q5K4L6 730 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 COG3Q96JB2 828 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 BTAF1O14981 1849 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 USP54Q70EL1 1684 aa24.21■■□□□ 1.47
HCFC2-205ENST00000550444 GPR162Q16538 588 aa24.2■■□□□ 1.46
HCFC2-205ENST00000550444 PUS7Q96PZ0 661 aaKnown RBP24.2■■□□□ 1.46
HCFC2-205ENST00000550444 TFCP2L1Q9NZI6 479 aa24.19■■□□□ 1.46
HCFC2-205ENST00000550444 PAPPAQ13219 1627 aa24.18■■□□□ 1.46
HCFC2-205ENST00000550444 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
HCFC2-205ENST00000550444 POLD1P28340 1107 aa24.18■■□□□ 1.46
HCFC2-205ENST00000550444 HOXC9P31274 260 aa24.17■■□□□ 1.46
HCFC2-205ENST00000550444 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
HCFC2-205ENST00000550444 SLC16A10Q8TF71 515 aa24.17■■□□□ 1.46
HCFC2-205ENST00000550444 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
HCFC2-205ENST00000550444 ZCRB1Q8TBF4 217 aaKnown RBP24.16■■□□□ 1.46
HCFC2-205ENST00000550444 PNPLA7Q6ZV29 1317 aa24.15■■□□□ 1.46
HCFC2-205ENST00000550444 MAP3K5Q99683 1374 aa24.15■■□□□ 1.46
HCFC2-205ENST00000550444 UTRNP46939 3433 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms