RNA–Protein interactions for RNA: ENST00000550088.1

AC016257.1-201, humanhuman

TSL 2 BASIC

Gene AC016257.1, Length 641 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016257.1-201ENST00000550088 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
AC016257.1-201ENST00000550088 PHTF2Q8N3S3 785 aa12.42□□□□□ -0.42
AC016257.1-201ENST00000550088 ARID3AQ99856 593 aa12.42□□□□□ -0.42
AC016257.1-201ENST00000550088 CHIC2Q9UKJ5 165 aa12.42□□□□□ -0.42
AC016257.1-201ENST00000550088 PALM3A6NDB9 673 aaPredicted RBP12.41□□□□□ -0.42
AC016257.1-201ENST00000550088 ATP9BO43861 1147 aa12.4□□□□□ -0.42
AC016257.1-201ENST00000550088 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
AC016257.1-201ENST00000550088 MRGPRX2Q96LB1 330 aa12.4□□□□□ -0.42
AC016257.1-201ENST00000550088 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
AC016257.1-201ENST00000550088 KCTD15Q96SI1 283 aaPredicted RBP12.39□□□□□ -0.43
AC016257.1-201ENST00000550088 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
AC016257.1-201ENST00000550088 LZTS3O60299 673 aaPredicted RBP12.38□□□□□ -0.43
AC016257.1-201ENST00000550088 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
AC016257.1-201ENST00000550088 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
AC016257.1-201ENST00000550088 CFAP70Q5T0N1 1121 aa12.38□□□□□ -0.43
AC016257.1-201ENST00000550088 TBC1D9Q6ZT07 1266 aa12.38□□□□□ -0.43
AC016257.1-201ENST00000550088 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
AC016257.1-201ENST00000550088 PKD2L1Q9P0L9 805 aa12.37□□□□□ -0.43
AC016257.1-201ENST00000550088 MAFBQ9Y5Q3 323 aaPredicted RBP12.37□□□□□ -0.43
AC016257.1-201ENST00000550088 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
AC016257.1-201ENST00000550088 SKIP12755 728 aa12.35□□□□□ -0.43
AC016257.1-201ENST00000550088 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
AC016257.1-201ENST00000550088 GDF9O60383 454 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 ADH1CP00326 375 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 GRM5P41594 1212 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 FOXC1Q12948 553 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 NR5A1Q13285 461 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 ARID5BQ14865 1188 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 PLPP7Q8NBV4 271 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
AC016257.1-201ENST00000550088 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
AC016257.1-201ENST00000550088 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
AC016257.1-201ENST00000550088 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
AC016257.1-201ENST00000550088 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 PRR20EP86478 221 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 PRR20CP86479 221 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 PRR20DP86480 221 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 PRR20BP86481 221 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 PRR20AP86496 221 aa12.32□□□□□ -0.44
AC016257.1-201ENST00000550088 DHX9Q08211 1270 aaKnown RBP12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 CCDC85AQ96PX6 553 aaPredicted RBP12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 ARXQ96QS3 562 aa12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 DOLKQ9UPQ8 538 aa12.31□□□□□ -0.44
AC016257.1-201ENST00000550088 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
AC016257.1-201ENST00000550088 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
AC016257.1-201ENST00000550088 FSHRP23945 695 aa12.3□□□□□ -0.44
AC016257.1-201ENST00000550088 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
AC016257.1-201ENST00000550088 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
AC016257.1-201ENST00000550088 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
AC016257.1-201ENST00000550088 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 RFX1P22670 979 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 EML3Q32P44 896 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 CYP4X1Q8N118 509 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 SIRT1Q96EB6 747 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 TOR4AQ9NXH8 423 aa12.28□□□□□ -0.44
AC016257.1-201ENST00000550088 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
AC016257.1-201ENST00000550088 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.45
AC016257.1-201ENST00000550088 CCDC116Q8IYX3 515 aa12.27□□□□□ -0.45
AC016257.1-201ENST00000550088 PCDHB11Q9Y5F2 797 aa12.27□□□□□ -0.45
AC016257.1-201ENST00000550088 TTC24A2A3L6 582 aaPredicted RBP12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 USP4Q13107 963 aa12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 NCOA4Q13772 614 aa12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 WASF2Q9Y6W5 498 aa12.26□□□□□ -0.45
AC016257.1-201ENST00000550088 ATP5J2-PTCD1G3V325 749 aa12.25□□□□□ -0.45
AC016257.1-201ENST00000550088 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
AC016257.1-201ENST00000550088 TNFRSF10AO00220 468 aa12.24□□□□□ -0.45
AC016257.1-201ENST00000550088 RAB15P59190 212 aa12.24□□□□□ -0.45
AC016257.1-201ENST00000550088 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
AC016257.1-201ENST00000550088 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
AC016257.1-201ENST00000550088 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
AC016257.1-201ENST00000550088 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
AC016257.1-201ENST00000550088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.23□□□□□ -0.45
AC016257.1-201ENST00000550088 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
AC016257.1-201ENST00000550088 NR3C2P08235 984 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 NNTQ13423 1086 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 OXLD1Q5BKU9 147 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 PPP1R26Q5T8A7 1209 aaPredicted RBP12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
AC016257.1-201ENST00000550088 MYCP01106 439 aaPredicted RBP12.21□□□□□ -0.45
AC016257.1-201ENST00000550088 J3QL48 77 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 ATG7O95352 703 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 SMPD1P17405 629 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 CC2D2BQ6DHV5 1058 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
AC016257.1-201ENST00000550088 FAM196BA6NMK8 535 aa12.19□□□□□ -0.46
AC016257.1-201ENST00000550088 MYT1Q01538 1121 aa12.19□□□□□ -0.46
AC016257.1-201ENST00000550088 ZNF784Q8NCA9 323 aaPredicted RBP12.18□□□□□ -0.46
AC016257.1-201ENST00000550088 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
AC016257.1-201ENST00000550088 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
AC016257.1-201ENST00000550088 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
AC016257.1-201ENST00000550088 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms