RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 OVOS2A0A0J9YW53 1432 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 OVOS2Q6IE36 1432 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 RGPD3A6NKT7 1758 aaPredicted RBP14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 RGPD4Q7Z3J3 1758 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.13
TRAFD1-207ENST00000550051 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-207ENST00000550051 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
TRAFD1-207ENST00000550051 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
TRAFD1-207ENST00000550051 QRICH2Q9H0J4 1663 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 WDR17Q8IZU2 1322 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 BCL9O00512 1426 aa14.2□□□□□ -0.14
TRAFD1-207ENST00000550051 PROM2Q8N271 834 aa14.19□□□□□ -0.14
TRAFD1-207ENST00000550051 L3MBTL2Q969R5 705 aa14.19□□□□□ -0.14
TRAFD1-207ENST00000550051 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 MARCH10Q8NA82 808 aaPredicted RBP14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 CARD10Q9BWT7 1032 aa14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 NINLQ9Y2I6 1382 aa14.18□□□□□ -0.14
TRAFD1-207ENST00000550051 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
TRAFD1-207ENST00000550051 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
TRAFD1-207ENST00000550051 LRRC37A3O60309 1634 aa14.17□□□□□ -0.14
TRAFD1-207ENST00000550051 YY1P25490 414 aa14.17□□□□□ -0.14
TRAFD1-207ENST00000550051 PTF1AQ7RTS3 328 aa14.17□□□□□ -0.14
TRAFD1-207ENST00000550051 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
TRAFD1-207ENST00000550051 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
TRAFD1-207ENST00000550051 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
TRAFD1-207ENST00000550051 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-207ENST00000550051 EXOC5O00471 708 aa14.15□□□□□ -0.14
TRAFD1-207ENST00000550051 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
TRAFD1-207ENST00000550051 WNK3Q9BYP7 1800 aa14.14□□□□□ -0.15
TRAFD1-207ENST00000550051 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-207ENST00000550051 TRPM1Q7Z4N2 1603 aa14.14□□□□□ -0.15
TRAFD1-207ENST00000550051 CASZ1Q86V15 1759 aa14.13□□□□□ -0.15
TRAFD1-207ENST00000550051 TXNRD1Q16881 649 aa14.12□□□□□ -0.15
TRAFD1-207ENST00000550051 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
TRAFD1-207ENST00000550051 CCDC7Q96M83 1385 aa14.11□□□□□ -0.15
TRAFD1-207ENST00000550051 CSB-PGBD3P0DP91 1061 aa14.11□□□□□ -0.15
TRAFD1-207ENST00000550051 PTGER2P43116 358 aa14.11□□□□□ -0.15
TRAFD1-207ENST00000550051 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-207ENST00000550051 SLC15A2Q16348 729 aa14.1□□□□□ -0.15
TRAFD1-207ENST00000550051 NFAT5O94916 1531 aa14.1□□□□□ -0.15
TRAFD1-207ENST00000550051 ABCC6O95255 1503 aa14.1□□□□□ -0.15
TRAFD1-207ENST00000550051 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-207ENST00000550051 USP31Q70CQ4 1352 aa14.09□□□□□ -0.15
TRAFD1-207ENST00000550051 SOX12O15370 315 aa14.09□□□□□ -0.15
TRAFD1-207ENST00000550051 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
TRAFD1-207ENST00000550051 STK32BQ9NY57 414 aa14.09□□□□□ -0.15
TRAFD1-207ENST00000550051 ZBTB7AO95365 584 aa14.08□□□□□ -0.16
TRAFD1-207ENST00000550051 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-207ENST00000550051 SBNO2Q9Y2G9 1366 aa14.07□□□□□ -0.16
TRAFD1-207ENST00000550051 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
TRAFD1-207ENST00000550051 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
TRAFD1-207ENST00000550051 MTFR1LQ9H019 292 aa14.06□□□□□ -0.16
TRAFD1-207ENST00000550051 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
TRAFD1-207ENST00000550051 USP54Q70EL1 1684 aa14.05□□□□□ -0.16
TRAFD1-207ENST00000550051 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
TRAFD1-207ENST00000550051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAFD1-207ENST00000550051 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
TRAFD1-207ENST00000550051 ERBB3P21860 1342 aa14.05□□□□□ -0.16
TRAFD1-207ENST00000550051 IL2RBP14784 551 aa14.04□□□□□ -0.16
TRAFD1-207ENST00000550051 PUS7Q96PZ0 661 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-207ENST00000550051 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
TRAFD1-207ENST00000550051 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
TRAFD1-207ENST00000550051 NME9Q86XW9 330 aa14.03□□□□□ -0.16
TRAFD1-207ENST00000550051 CD163L1Q9NR16 1453 aa14.03□□□□□ -0.16
TRAFD1-207ENST00000550051 MYOM1P52179 1685 aa14.03□□□□□ -0.16
TRAFD1-207ENST00000550051 KAT6BQ8WYB5 2073 aa14.02□□□□□ -0.16
TRAFD1-207ENST00000550051 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-207ENST00000550051 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
TRAFD1-207ENST00000550051 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-207ENST00000550051 SLC12A5Q9H2X9 1139 aa14.02□□□□□ -0.17
TRAFD1-207ENST00000550051 LTN1O94822 1766 aa14.01□□□□□ -0.17
TRAFD1-207ENST00000550051 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
TRAFD1-207ENST00000550051 BTAF1O14981 1849 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 TMC1Q8TDI8 760 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 ARXQ96QS3 562 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 CHD4Q14839 1912 aa14□□□□□ -0.17
TRAFD1-207ENST00000550051 EDC4Q6P2E9 1401 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 ZNF784Q8NCA9 323 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 SLC16A10Q8TF71 515 aa13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 IP6K1Q92551 441 aa13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 PAPPAQ13219 1627 aa13.99□□□□□ -0.17
TRAFD1-207ENST00000550051 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
TRAFD1-207ENST00000550051 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
TRAFD1-207ENST00000550051 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
TRAFD1-207ENST00000550051 ZNF827Q17R98 1081 aa13.96□□□□□ -0.17
TRAFD1-207ENST00000550051 UTRNP46939 3433 aa13.96□□□□□ -0.18
TRAFD1-207ENST00000550051 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
TRAFD1-207ENST00000550051 DDX54Q8TDD1 881 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-207ENST00000550051 QSER1Q2KHR3 1735 aa13.95□□□□□ -0.18
TRAFD1-207ENST00000550051 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms