RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 RBM47A0AV96 593 aaKnown RBP14.89□□□□□ -0.03
PRIM1-204ENST00000549549 SWI5Q1ZZU3 235 aa14.89□□□□□ -0.03
PRIM1-204ENST00000549549 EML3Q32P44 896 aa14.89□□□□□ -0.03
PRIM1-204ENST00000549549 ADAM32Q8TC27 787 aa14.89□□□□□ -0.03
PRIM1-204ENST00000549549 ERCC3P19447 782 aa14.88□□□□□ -0.03
PRIM1-204ENST00000549549 BCAMP50895 628 aa14.88□□□□□ -0.03
PRIM1-204ENST00000549549 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
PRIM1-204ENST00000549549 SPSB2Q99619 263 aa14.88□□□□□ -0.03
PRIM1-204ENST00000549549 DPYDQ12882 1025 aa14.87□□□□□ -0.03
PRIM1-204ENST00000549549 POTEB3A0JP26 581 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 SOWAHDA6NJG2 315 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 GOLGA8CPA6NN73 597 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 ATP2B4P23634 1241 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 CLDN10P78369 228 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 POTEBQ6S5H4 581 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 DNAJC14Q6Y2X3 702 aaPredicted RBP14.86□□□□□ -0.03
PRIM1-204ENST00000549549 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 TRIM50Q86XT4 487 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 C1orf216Q8TAB5 229 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 ARHGAP9Q9BRR9 750 aa14.86□□□□□ -0.03
PRIM1-204ENST00000549549 DKK1O94907 266 aa14.85□□□□□ -0.03
PRIM1-204ENST00000549549 TSGA10IPQ3SY00 556 aa14.85□□□□□ -0.03
PRIM1-204ENST00000549549 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
PRIM1-204ENST00000549549 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
PRIM1-204ENST00000549549 HS3ST6Q96QI5 342 aa14.84□□□□□ -0.03
PRIM1-204ENST00000549549 DNAAF2Q9NVR5 837 aaKnown RBP14.83□□□□□ -0.04
PRIM1-204ENST00000549549 NOD1Q9Y239 953 aa14.83□□□□□ -0.04
PRIM1-204ENST00000549549 UNCXA6NJT0 531 aa14.82□□□□□ -0.04
PRIM1-204ENST00000549549 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
PRIM1-204ENST00000549549 SIX5Q8N196 739 aa14.81□□□□□ -0.04
PRIM1-204ENST00000549549 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
PRIM1-204ENST00000549549 PRDM9Q9NQV7 894 aa14.81□□□□□ -0.04
PRIM1-204ENST00000549549 ZBTB33Q86T24 672 aa14.8□□□□□ -0.04
PRIM1-204ENST00000549549 WNT2BQ93097 391 aa14.8□□□□□ -0.04
PRIM1-204ENST00000549549 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
PRIM1-204ENST00000549549 SERPINB4P48594 390 aa14.79□□□□□ -0.04
PRIM1-204ENST00000549549 NOM1Q5C9Z4 860 aaKnown RBP14.78□□□□□ -0.04
PRIM1-204ENST00000549549 PTCRAQ6ISU1 281 aaPredicted RBP14.78□□□□□ -0.04
PRIM1-204ENST00000549549 SH3RF1Q7Z6J0 888 aa14.78□□□□□ -0.04
PRIM1-204ENST00000549549 DZIP3Q86Y13 1208 aaKnown RBP14.78□□□□□ -0.04
PRIM1-204ENST00000549549 ZNF594Q96JF6 807 aaPredicted RBP14.78□□□□□ -0.04
PRIM1-204ENST00000549549 UNC93B1Q9H1C4 597 aa14.78□□□□□ -0.04
PRIM1-204ENST00000549549 WBP1LQ9NX94 342 aa14.78□□□□□ -0.04
PRIM1-204ENST00000549549 DOLKQ9UPQ8 538 aa14.77□□□□□ -0.05
PRIM1-204ENST00000549549 TAS1R3Q7RTX0 852 aa14.75□□□□□ -0.05
PRIM1-204ENST00000549549 KIAA1024Q9UPX6 916 aa14.75□□□□□ -0.05
PRIM1-204ENST00000549549 IGSF3O75054 1194 aa14.74□□□□□ -0.05
PRIM1-204ENST00000549549 ADH1BP00325 375 aa14.74□□□□□ -0.05
PRIM1-204ENST00000549549 IGSF5Q9NSI5 407 aa14.74□□□□□ -0.05
PRIM1-204ENST00000549549 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
PRIM1-204ENST00000549549 SEC13P55735 322 aa14.73□□□□□ -0.05
PRIM1-204ENST00000549549 COPS2P61201 443 aa14.73□□□□□ -0.05
PRIM1-204ENST00000549549 OCLNQ16625 522 aa14.73□□□□□ -0.05
PRIM1-204ENST00000549549 SIRT1Q96EB6 747 aa14.73□□□□□ -0.05
PRIM1-204ENST00000549549 SCNN1AP37088 669 aa14.72□□□□□ -0.05
PRIM1-204ENST00000549549 GTF2IP78347 998 aa14.72□□□□□ -0.05
PRIM1-204ENST00000549549 EGFL7Q9UHF1 273 aa14.72□□□□□ -0.05
PRIM1-204ENST00000549549 MARSP56192 900 aaKnown RBP14.71□□□□□ -0.05
PRIM1-204ENST00000549549 CXXC1Q9P0U4 656 aaPredicted RBP14.71□□□□□ -0.05
PRIM1-204ENST00000549549 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.05
PRIM1-204ENST00000549549 PCDHGA11Q9Y5H2 935 aa14.71□□□□□ -0.05
PRIM1-204ENST00000549549 ZPR1O75312 459 aa14.7□□□□□ -0.06
PRIM1-204ENST00000549549 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
PRIM1-204ENST00000549549 CCDC102BQ68D86 513 aa14.7□□□□□ -0.06
PRIM1-204ENST00000549549 OXLD1Q5BKU9 147 aa14.69□□□□□ -0.06
PRIM1-204ENST00000549549 PRMT3O60678 531 aa14.68□□□□□ -0.06
PRIM1-204ENST00000549549 ERFEQ4G0M1 354 aa14.68□□□□□ -0.06
PRIM1-204ENST00000549549 ANKRD13DQ6ZTN6 518 aa14.68□□□□□ -0.06
PRIM1-204ENST00000549549 BPHLQ86WA6 291 aaPredicted RBP14.68□□□□□ -0.06
PRIM1-204ENST00000549549 CCDC24Q8N4L8 307 aa14.68□□□□□ -0.06
PRIM1-204ENST00000549549 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
PRIM1-204ENST00000549549 CARD14Q9BXL6 1004 aa14.67□□□□□ -0.06
PRIM1-204ENST00000549549 KIAA1522Q9P206 1035 aaPredicted RBP14.67□□□□□ -0.06
PRIM1-204ENST00000549549 MAGEB6P1A0A0J9YX57 407 aa14.66□□□□□ -0.06
PRIM1-204ENST00000549549 ESPNB1AK53 854 aa14.66□□□□□ -0.06
PRIM1-204ENST00000549549 TLL1O43897 1013 aa14.66□□□□□ -0.06
PRIM1-204ENST00000549549 ZNF16P17020 682 aaPredicted RBP14.66□□□□□ -0.06
PRIM1-204ENST00000549549 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
PRIM1-204ENST00000549549 BAP1Q92560 729 aa14.65□□□□□ -0.06
PRIM1-204ENST00000549549 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
PRIM1-204ENST00000549549 BIN2Q9UBW5 565 aaPredicted RBP14.65□□□□□ -0.06
PRIM1-204ENST00000549549 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
PRIM1-204ENST00000549549 SFI1A8K8P3 1242 aa14.64□□□□□ -0.07
PRIM1-204ENST00000549549 USP4Q13107 963 aa14.64□□□□□ -0.07
PRIM1-204ENST00000549549 C4orf48Q5BLP8 95 aa14.64□□□□□ -0.07
PRIM1-204ENST00000549549 NYAP1Q6ZVC0 841 aa14.64□□□□□ -0.07
PRIM1-204ENST00000549549 TPCN2Q8NHX9 752 aa14.64□□□□□ -0.07
PRIM1-204ENST00000549549 THSD4Q6ZMP0 1018 aa14.63□□□□□ -0.07
PRIM1-204ENST00000549549 C1QTNF2Q9BXJ5 285 aa14.63□□□□□ -0.07
PRIM1-204ENST00000549549 ICMTO60725 284 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 LHX8Q68G74 356 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 NPAS4Q8IUM7 802 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 ZNF511Q8NB15 262 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 FOXJ1Q92949 421 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
PRIM1-204ENST00000549549 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
PRIM1-204ENST00000549549 SLC6A16Q9GZN6 736 aa14.61□□□□□ -0.07
PRIM1-204ENST00000549549 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
PRIM1-204ENST00000549549 ANKRD33BA6NCL7 494 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms