RNA–Protein interactions for RNA: ENST00000549500.1

PCED1B-204, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 3

Gene PCED1B, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-204ENST00000549500 WNK3Q9BYP7 1800 aa18.46■□□□□ 0.55
PCED1B-204ENST00000549500 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
PCED1B-204ENST00000549500 EN1Q05925 392 aaPredicted RBP18.45■□□□□ 0.54
PCED1B-204ENST00000549500 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
PCED1B-204ENST00000549500 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
PCED1B-204ENST00000549500 EDC4Q6P2E9 1401 aaKnown RBP18.44■□□□□ 0.54
PCED1B-204ENST00000549500 BAG6P46379 1132 aa18.44■□□□□ 0.54
PCED1B-204ENST00000549500 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
PCED1B-204ENST00000549500 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
PCED1B-204ENST00000549500 PEAK1Q9H792 1746 aa18.43■□□□□ 0.54
PCED1B-204ENST00000549500 TRIM37O94972 964 aa18.43■□□□□ 0.54
PCED1B-204ENST00000549500 LTN1O94822 1766 aa18.42■□□□□ 0.54
PCED1B-204ENST00000549500 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
PCED1B-204ENST00000549500 USP47Q96K76 1375 aa18.42■□□□□ 0.54
PCED1B-204ENST00000549500 OVOS2A0A0J9YW53 1432 aa18.41■□□□□ 0.54
PCED1B-204ENST00000549500 OVOS2Q6IE36 1432 aa18.41■□□□□ 0.54
PCED1B-204ENST00000549500 ABCC6O95255 1503 aa18.41■□□□□ 0.54
PCED1B-204ENST00000549500 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
PCED1B-204ENST00000549500 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
PCED1B-204ENST00000549500 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
PCED1B-204ENST00000549500 CAMKK2Q96RR4 588 aa18.39■□□□□ 0.53
PCED1B-204ENST00000549500 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
PCED1B-204ENST00000549500 SBF2Q86WG5 1849 aa18.39■□□□□ 0.53
PCED1B-204ENST00000549500 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
PCED1B-204ENST00000549500 CARD10Q9BWT7 1032 aa18.37■□□□□ 0.53
PCED1B-204ENST00000549500 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
PCED1B-204ENST00000549500 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
PCED1B-204ENST00000549500 RREB1Q92766 1687 aa18.37■□□□□ 0.53
PCED1B-204ENST00000549500 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
PCED1B-204ENST00000549500 ERBB3P21860 1342 aa18.35■□□□□ 0.53
PCED1B-204ENST00000549500 APBA3O96018 575 aa18.35■□□□□ 0.53
PCED1B-204ENST00000549500 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
PCED1B-204ENST00000549500 DDB1Q16531 1140 aa18.34■□□□□ 0.53
PCED1B-204ENST00000549500 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
PCED1B-204ENST00000549500 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
PCED1B-204ENST00000549500 NUP188Q5SRE5 1749 aa18.34■□□□□ 0.53
PCED1B-204ENST00000549500 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
PCED1B-204ENST00000549500 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
PCED1B-204ENST00000549500 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
PCED1B-204ENST00000549500 MYOM1P52179 1685 aa18.32■□□□□ 0.52
PCED1B-204ENST00000549500 LRP5O75197 1615 aa18.32■□□□□ 0.52
PCED1B-204ENST00000549500 FBLN1P23142 703 aa18.32■□□□□ 0.52
PCED1B-204ENST00000549500 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
PCED1B-204ENST00000549500 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
PCED1B-204ENST00000549500 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
PCED1B-204ENST00000549500 TMF1P82094 1093 aa18.31■□□□□ 0.52
PCED1B-204ENST00000549500 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
PCED1B-204ENST00000549500 R3HDM1Q15032 1099 aaKnown RBP18.3■□□□□ 0.52
PCED1B-204ENST00000549500 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
PCED1B-204ENST00000549500 BCL9O00512 1426 aa18.3■□□□□ 0.52
PCED1B-204ENST00000549500 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
PCED1B-204ENST00000549500 TNS2Q63HR2 1409 aa18.29■□□□□ 0.52
PCED1B-204ENST00000549500 RGPD3A6NKT7 1758 aaPredicted RBP18.28■□□□□ 0.52
PCED1B-204ENST00000549500 RGPD4Q7Z3J3 1758 aa18.28■□□□□ 0.52
PCED1B-204ENST00000549500 NLRP2Q9NX02 1062 aa18.28■□□□□ 0.52
PCED1B-204ENST00000549500 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
PCED1B-204ENST00000549500 FYB1O15117 783 aa18.27■□□□□ 0.52
PCED1B-204ENST00000549500 IP6K1Q92551 441 aa18.27■□□□□ 0.52
PCED1B-204ENST00000549500 COG3Q96JB2 828 aa18.27■□□□□ 0.52
PCED1B-204ENST00000549500 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
PCED1B-204ENST00000549500 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
PCED1B-204ENST00000549500 KIF20BQ96Q89 1820 aa18.26■□□□□ 0.51
PCED1B-204ENST00000549500 EXOC5O00471 708 aa18.25■□□□□ 0.51
PCED1B-204ENST00000549500 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
PCED1B-204ENST00000549500 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
PCED1B-204ENST00000549500 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
PCED1B-204ENST00000549500 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
PCED1B-204ENST00000549500 HOXC9P31274 260 aa18.23■□□□□ 0.51
PCED1B-204ENST00000549500 PLSCR1O15162 318 aa18.22■□□□□ 0.51
PCED1B-204ENST00000549500 KCNQ2O43526 872 aa18.22■□□□□ 0.51
PCED1B-204ENST00000549500 IL2RBP14784 551 aa18.22■□□□□ 0.51
PCED1B-204ENST00000549500 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
PCED1B-204ENST00000549500 PROM2Q8N271 834 aa18.22■□□□□ 0.51
PCED1B-204ENST00000549500 LTV1Q96GA3 475 aaPredicted RBP18.22■□□□□ 0.51
PCED1B-204ENST00000549500 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
PCED1B-204ENST00000549500 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
PCED1B-204ENST00000549500 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
PCED1B-204ENST00000549500 KAT6BQ8WYB5 2073 aa18.19■□□□□ 0.5
PCED1B-204ENST00000549500 AMPHP49418 695 aa18.19■□□□□ 0.5
PCED1B-204ENST00000549500 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
PCED1B-204ENST00000549500 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
PCED1B-204ENST00000549500 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
PCED1B-204ENST00000549500 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
PCED1B-204ENST00000549500 ACSBG1Q96GR2 724 aa18.18■□□□□ 0.5
PCED1B-204ENST00000549500 BTAF1O14981 1849 aa18.17■□□□□ 0.5
PCED1B-204ENST00000549500 MEGF6O75095 1541 aa18.17■□□□□ 0.5
PCED1B-204ENST00000549500 HSPA5P11021 654 aaKnown RBP18.15■□□□□ 0.5
PCED1B-204ENST00000549500 NBPF14Q5TI25 921 aa18.15■□□□□ 0.5
PCED1B-204ENST00000549500 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
PCED1B-204ENST00000549500 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
PCED1B-204ENST00000549500 CASZ1Q86V15 1759 aa18.14■□□□□ 0.5
PCED1B-204ENST00000549500 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
PCED1B-204ENST00000549500 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
PCED1B-204ENST00000549500 TXNRD1Q16881 649 aa18.13■□□□□ 0.49
PCED1B-204ENST00000549500 PDGFDQ9GZP0 370 aaPredicted RBP18.13■□□□□ 0.49
PCED1B-204ENST00000549500 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
PCED1B-204ENST00000549500 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
PCED1B-204ENST00000549500 INSRP06213 1382 aa18.12■□□□□ 0.49
PCED1B-204ENST00000549500 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCED1B-204ENST00000549500 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms