RNA–Protein interactions for RNA: ENST00000549457.1

NOP56P3-201, Transcript of NOP56 ribonucleoprotein pseudogene 3, humanhuman

BASIC

Gene NOP56P3, Length 385 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56P3-201ENST00000549457 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L21D6R901 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
NOP56P3-201ENST00000549457 S1PR4O95977 384 aa9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 CCDC125Q86Z20 511 aa9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 SLC10A4Q96EP9 437 aa9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
NOP56P3-201ENST00000549457 RASA1P20936 1047 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 NBPF20Q3BBV1 942 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 BAP1Q92560 729 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 ZMIZ1Q9ULJ6 1067 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 DOLKQ9UPQ8 538 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
NOP56P3-201ENST00000549457 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 PTK7Q13308 1070 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 ERFEQ4G0M1 354 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 TMEM164Q5U3C3 297 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 STK32AQ8WU08 396 aa9.14□□□□□ -0.95
NOP56P3-201ENST00000549457 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
NOP56P3-201ENST00000549457 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
NOP56P3-201ENST00000549457 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
NOP56P3-201ENST00000549457 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
NOP56P3-201ENST00000549457 ANKMY2Q8IV38 441 aa9.12□□□□□ -0.95
NOP56P3-201ENST00000549457 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
NOP56P3-201ENST00000549457 OGFOD1Q8N543 542 aa9.12□□□□□ -0.95
NOP56P3-201ENST00000549457 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
NOP56P3-201ENST00000549457 ZBTB24O43167 697 aaPredicted RBP9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 GGCXP38435 758 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 NKX2-3Q8TAU0 364 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 GNEQ9Y223 722 aaKnown RBP9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
NOP56P3-201ENST00000549457 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
NOP56P3-201ENST00000549457 SWI5Q1ZZU3 235 aa9.1□□□□□ -0.95
NOP56P3-201ENST00000549457 TRMT44Q8IYL2 757 aaKnown RBP9.1□□□□□ -0.95
NOP56P3-201ENST00000549457 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
NOP56P3-201ENST00000549457 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
NOP56P3-201ENST00000549457 KCNC4Q03721 635 aa9.09□□□□□ -0.95
NOP56P3-201ENST00000549457 OXLD1Q5BKU9 147 aa9.09□□□□□ -0.95
NOP56P3-201ENST00000549457 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
NOP56P3-201ENST00000549457 CCDC85AQ96PX6 553 aaPredicted RBP9.09□□□□□ -0.95
NOP56P3-201ENST00000549457 SH3BP2P78314 561 aa9.08□□□□□ -0.96
NOP56P3-201ENST00000549457 USP4Q13107 963 aa9.08□□□□□ -0.96
NOP56P3-201ENST00000549457 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
NOP56P3-201ENST00000549457 SIX5Q8N196 739 aa9.08□□□□□ -0.96
NOP56P3-201ENST00000549457 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
NOP56P3-201ENST00000549457 ESPNB1AK53 854 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 GTF2IP78347 998 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 CLDN10P78369 228 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 DPYDQ12882 1025 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 SND1Q7KZF4 910 aaKnown RBP eCLIP9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 ANKLE1Q8NAG6 615 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
NOP56P3-201ENST00000549457 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
NOP56P3-201ENST00000549457 WNT7BP56706 349 aa9.06□□□□□ -0.96
NOP56P3-201ENST00000549457 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 SSFA2P28290 1259 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 ARID4AP29374 1257 aaPredicted RBP9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 TRIM32Q13049 653 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 CCDC27Q2M243 656 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 TSGA10IPQ3SY00 556 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 POTEGQ6S5H5 508 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 PCDHB11Q9Y5F2 797 aa9.05□□□□□ -0.96
NOP56P3-201ENST00000549457 SEC13P55735 322 aa9.04□□□□□ -0.96
NOP56P3-201ENST00000549457 PSME1Q06323 249 aa9.04□□□□□ -0.96
NOP56P3-201ENST00000549457 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
NOP56P3-201ENST00000549457 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 TXNDC2Q86VQ3 553 aa9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 KCTD15Q96SI1 283 aaPredicted RBP9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
NOP56P3-201ENST00000549457 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
NOP56P3-201ENST00000549457 ATP2B4P23634 1241 aa9.02□□□□□ -0.97
NOP56P3-201ENST00000549457 RPIAP49247 311 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms