RNA–Protein interactions for RNA: ENST00000549454.5

SYT1-206, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-206ENST00000549454 CCDC116Q8IYX3 515 aa9.68□□□□□ -0.86
SYT1-206ENST00000549454 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
SYT1-206ENST00000549454 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
SYT1-206ENST00000549454 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
SYT1-206ENST00000549454 MRPL14Q6P1L8 145 aaKnown RBP9.66□□□□□ -0.86
SYT1-206ENST00000549454 DZIP3Q86Y13 1208 aaKnown RBP9.66□□□□□ -0.86
SYT1-206ENST00000549454 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
SYT1-206ENST00000549454 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
SYT1-206ENST00000549454 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
SYT1-206ENST00000549454 CDV3Q9UKY7 258 aaKnown RBP9.65□□□□□ -0.86
SYT1-206ENST00000549454 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
SYT1-206ENST00000549454 ZBBXA8MT70 800 aa9.64□□□□□ -0.87
SYT1-206ENST00000549454 FBXO45P0C2W1 286 aa9.64□□□□□ -0.87
SYT1-206ENST00000549454 INTS6LQ5JSJ4 861 aaKnown RBP9.64□□□□□ -0.87
SYT1-206ENST00000549454 C6orf118Q5T5N4 469 aa9.64□□□□□ -0.87
SYT1-206ENST00000549454 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
SYT1-206ENST00000549454 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
SYT1-206ENST00000549454 SCARF1Q14162 830 aa9.63□□□□□ -0.87
SYT1-206ENST00000549454 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
SYT1-206ENST00000549454 PCDHB9Q9Y5E1 797 aa9.63□□□□□ -0.87
SYT1-206ENST00000549454 APBB1O00213 710 aa9.62□□□□□ -0.87
SYT1-206ENST00000549454 GPR37L1O60883 481 aa9.61□□□□□ -0.87
SYT1-206ENST00000549454 CBLBQ13191 982 aa9.61□□□□□ -0.87
SYT1-206ENST00000549454 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
SYT1-206ENST00000549454 BMP2P12643 396 aa9.6□□□□□ -0.87
SYT1-206ENST00000549454 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
SYT1-206ENST00000549454 MEIOBQ8N635 442 aa9.6□□□□□ -0.87
SYT1-206ENST00000549454 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
SYT1-206ENST00000549454 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
SYT1-206ENST00000549454 SOBPA7XYQ1 873 aa9.59□□□□□ -0.87
SYT1-206ENST00000549454 SOCS7O14512 581 aa9.59□□□□□ -0.87
SYT1-206ENST00000549454 UPP2O95045 317 aa9.59□□□□□ -0.87
SYT1-206ENST00000549454 DHX9Q08211 1270 aaKnown RBP9.59□□□□□ -0.87
SYT1-206ENST00000549454 NR1H3Q13133 447 aa9.58□□□□□ -0.88
SYT1-206ENST00000549454 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
SYT1-206ENST00000549454 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
SYT1-206ENST00000549454 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
SYT1-206ENST00000549454 AGBL1Q96MI9 1066 aa9.55□□□□□ -0.88
SYT1-206ENST00000549454 PRM3Q9NNZ6 103 aa9.54□□□□□ -0.88
SYT1-206ENST00000549454 ESPNB1AK53 854 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 ABL2P42684 1182 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 RELBQ01201 579 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 MCM6Q14566 821 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 Q6ZVU0 165 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 TSEN34Q9BSV6 310 aaKnown RBP9.53□□□□□ -0.88
SYT1-206ENST00000549454 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 CYLDQ9NQC7 956 aa9.53□□□□□ -0.88
SYT1-206ENST00000549454 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SYT1-206ENST00000549454 MAN1A2O60476 641 aa9.52□□□□□ -0.89
SYT1-206ENST00000549454 VEGFBP49765 207 aa9.52□□□□□ -0.89
SYT1-206ENST00000549454 TERTO14746 1132 aaKnown RBP9.51□□□□□ -0.89
SYT1-206ENST00000549454 WFS1O76024 890 aa9.51□□□□□ -0.89
SYT1-206ENST00000549454 TREML4Q6UXN2 200 aa9.51□□□□□ -0.89
SYT1-206ENST00000549454 NFX1Q12986 1120 aaKnown RBP9.5□□□□□ -0.89
SYT1-206ENST00000549454 IRF5Q13568 498 aa9.5□□□□□ -0.89
SYT1-206ENST00000549454 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
SYT1-206ENST00000549454 ZNF395Q9H8N7 513 aaPredicted RBP9.5□□□□□ -0.89
SYT1-206ENST00000549454 LILRA1O75019 489 aa9.49□□□□□ -0.89
SYT1-206ENST00000549454 VAC14Q08AM6 782 aa9.49□□□□□ -0.89
SYT1-206ENST00000549454 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
SYT1-206ENST00000549454 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
SYT1-206ENST00000549454 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
SYT1-206ENST00000549454 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
SYT1-206ENST00000549454 ADH1AP07327 375 aa9.48□□□□□ -0.89
SYT1-206ENST00000549454 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
SYT1-206ENST00000549454 NXF1Q9UBU9 619 aaKnown RBP9.48□□□□□ -0.89
SYT1-206ENST00000549454 INSM2Q96T92 566 aaPredicted RBP9.47□□□□□ -0.89
SYT1-206ENST00000549454 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
SYT1-206ENST00000549454 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
SYT1-206ENST00000549454 SPINT1O43278 529 aa9.46□□□□□ -0.9
SYT1-206ENST00000549454 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
SYT1-206ENST00000549454 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
SYT1-206ENST00000549454 ZNF592Q92610 1267 aa9.46□□□□□ -0.9
SYT1-206ENST00000549454 CTSOP43234 321 aaPredicted RBP9.45□□□□□ -0.9
SYT1-206ENST00000549454 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
SYT1-206ENST00000549454 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
SYT1-206ENST00000549454 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
SYT1-206ENST00000549454 SCTRP47872 440 aa9.44□□□□□ -0.9
SYT1-206ENST00000549454 POM121Q96HA1 1249 aa9.44□□□□□ -0.9
SYT1-206ENST00000549454 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
SYT1-206ENST00000549454 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
SYT1-206ENST00000549454 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
SYT1-206ENST00000549454 KDF1Q8NAX2 398 aaPredicted RBP9.43□□□□□ -0.9
SYT1-206ENST00000549454 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
SYT1-206ENST00000549454 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
SYT1-206ENST00000549454 PTGIRP43119 386 aa9.42□□□□□ -0.9
SYT1-206ENST00000549454 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
SYT1-206ENST00000549454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.9
SYT1-206ENST00000549454 ATP5J2-PTCD1G3V325 749 aa9.41□□□□□ -0.9
SYT1-206ENST00000549454 H3BM21 787 aa9.41□□□□□ -0.9
SYT1-206ENST00000549454 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
SYT1-206ENST00000549454 RNF217Q8TC41 542 aa9.4□□□□□ -0.9
SYT1-206ENST00000549454 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
SYT1-206ENST00000549454 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
SYT1-206ENST00000549454 MEN1O00255 615 aa9.39□□□□□ -0.91
SYT1-206ENST00000549454 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
SYT1-206ENST00000549454 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
SYT1-206ENST00000549454 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
SYT1-206ENST00000549454 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
SYT1-206ENST00000549454 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms