RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
TMEM116-207ENST00000549425 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
TMEM116-207ENST00000549425 CRB1P82279 1406 aa13.01□□□□□ -0.33
TMEM116-207ENST00000549425 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-207ENST00000549425 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
TMEM116-207ENST00000549425 BCL9O00512 1426 aa13□□□□□ -0.33
TMEM116-207ENST00000549425 HTRA3P83110 453 aa13□□□□□ -0.33
TMEM116-207ENST00000549425 SLC16A10Q8TF71 515 aa13□□□□□ -0.33
TMEM116-207ENST00000549425 SIRT1Q96EB6 747 aa13□□□□□ -0.33
TMEM116-207ENST00000549425 TOMM70O94826 608 aa12.99□□□□□ -0.33
TMEM116-207ENST00000549425 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-207ENST00000549425 PRAM1Q96QH2 718 aa12.99□□□□□ -0.33
TMEM116-207ENST00000549425 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
TMEM116-207ENST00000549425 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
TMEM116-207ENST00000549425 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
TMEM116-207ENST00000549425 PIK3C2GO75747 1445 aa12.97□□□□□ -0.33
TMEM116-207ENST00000549425 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
TMEM116-207ENST00000549425 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
TMEM116-207ENST00000549425 CPDO75976 1380 aa12.96□□□□□ -0.33
TMEM116-207ENST00000549425 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
TMEM116-207ENST00000549425 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
TMEM116-207ENST00000549425 HIRIP3Q9BW71 556 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-207ENST00000549425 POGKQ9P215 609 aa12.95□□□□□ -0.34
TMEM116-207ENST00000549425 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
TMEM116-207ENST00000549425 ITSN1Q15811 1721 aa12.94□□□□□ -0.34
TMEM116-207ENST00000549425 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
TMEM116-207ENST00000549425 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
TMEM116-207ENST00000549425 HSPA1AP0DMV8 641 aaKnown RBP12.93□□□□□ -0.34
TMEM116-207ENST00000549425 HSPA1BP0DMV9 641 aaKnown RBP12.93□□□□□ -0.34
TMEM116-207ENST00000549425 TOM1L2Q6ZVM7 507 aa12.93□□□□□ -0.34
TMEM116-207ENST00000549425 ITGAEP38570 1179 aa12.92□□□□□ -0.34
TMEM116-207ENST00000549425 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
TMEM116-207ENST00000549425 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
TMEM116-207ENST00000549425 BTAF1O14981 1849 aa12.92□□□□□ -0.34
TMEM116-207ENST00000549425 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-207ENST00000549425 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
TMEM116-207ENST00000549425 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
TMEM116-207ENST00000549425 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
TMEM116-207ENST00000549425 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
TMEM116-207ENST00000549425 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
TMEM116-207ENST00000549425 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-207ENST00000549425 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
TMEM116-207ENST00000549425 USP19O94966 1318 aa12.88□□□□□ -0.35
TMEM116-207ENST00000549425 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-207ENST00000549425 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
TMEM116-207ENST00000549425 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
TMEM116-207ENST00000549425 MSH5O43196 834 aa12.87□□□□□ -0.35
TMEM116-207ENST00000549425 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
TMEM116-207ENST00000549425 WASLO00401 505 aaPredicted RBP12.86□□□□□ -0.35
TMEM116-207ENST00000549425 EXOC5O00471 708 aa12.86□□□□□ -0.35
TMEM116-207ENST00000549425 GCP02774 474 aa12.86□□□□□ -0.35
TMEM116-207ENST00000549425 C14orf93Q9H972 538 aaKnown RBP12.86□□□□□ -0.35
TMEM116-207ENST00000549425 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
TMEM116-207ENST00000549425 USP6P35125 1406 aa12.86□□□□□ -0.35
TMEM116-207ENST00000549425 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 TRPM1Q7Z4N2 1603 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 CFAP70Q5T0N1 1121 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
TMEM116-207ENST00000549425 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
TMEM116-207ENST00000549425 FSTL1Q12841 308 aa12.84□□□□□ -0.35
TMEM116-207ENST00000549425 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
TMEM116-207ENST00000549425 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
TMEM116-207ENST00000549425 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.36
TMEM116-207ENST00000549425 ABCC6O95255 1503 aa12.83□□□□□ -0.36
TMEM116-207ENST00000549425 NLRP13Q86W25 1043 aa12.82□□□□□ -0.36
TMEM116-207ENST00000549425 CSB-PGBD3P0DP91 1061 aa12.81□□□□□ -0.36
TMEM116-207ENST00000549425 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
TMEM116-207ENST00000549425 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
TMEM116-207ENST00000549425 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
TMEM116-207ENST00000549425 ACEP12821 1306 aa12.81□□□□□ -0.36
TMEM116-207ENST00000549425 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-207ENST00000549425 COL18A1P39060 1754 aa12.8□□□□□ -0.36
TMEM116-207ENST00000549425 KCNQ4P56696 695 aa12.8□□□□□ -0.36
TMEM116-207ENST00000549425 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
TMEM116-207ENST00000549425 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
TMEM116-207ENST00000549425 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
TMEM116-207ENST00000549425 PPIP5K1Q6PFW1 1433 aa12.78□□□□□ -0.36
TMEM116-207ENST00000549425 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
TMEM116-207ENST00000549425 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
TMEM116-207ENST00000549425 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
TMEM116-207ENST00000549425 SLIT3O75094 1523 aa12.76□□□□□ -0.37
TMEM116-207ENST00000549425 ADGRB1O14514 1584 aa12.76□□□□□ -0.37
TMEM116-207ENST00000549425 MLLT1Q03111 559 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-207ENST00000549425 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
TMEM116-207ENST00000549425 LY75O60449 1722 aa12.74□□□□□ -0.37
TMEM116-207ENST00000549425 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
TMEM116-207ENST00000549425 KCPQ6ZWJ8 1503 aa12.73□□□□□ -0.37
TMEM116-207ENST00000549425 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
TMEM116-207ENST00000549425 PLEKHG2Q9H7P9 1386 aa12.72□□□□□ -0.37
TMEM116-207ENST00000549425 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
TMEM116-207ENST00000549425 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
TMEM116-207ENST00000549425 NLRP6P59044 892 aa12.72□□□□□ -0.37
TMEM116-207ENST00000549425 CCNL1Q9UK58 526 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-207ENST00000549425 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
TMEM116-207ENST00000549425 KDM2BQ8NHM5 1336 aa12.71□□□□□ -0.37
TMEM116-207ENST00000549425 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.37
TMEM116-207ENST00000549425 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
TMEM116-207ENST00000549425 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms