RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 AMPHP49418 695 aa12.98□□□□□ -0.33
CALCOCO1-213ENST00000549349 SLIT2O94813 1529 aa12.98□□□□□ -0.33
CALCOCO1-213ENST00000549349 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 HOXC9P31274 260 aa12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-213ENST00000549349 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
CALCOCO1-213ENST00000549349 MTHFSP49914 203 aa12.96□□□□□ -0.33
CALCOCO1-213ENST00000549349 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO1-213ENST00000549349 IP6K1Q92551 441 aa12.96□□□□□ -0.33
CALCOCO1-213ENST00000549349 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO1-213ENST00000549349 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
CALCOCO1-213ENST00000549349 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
CALCOCO1-213ENST00000549349 USP21Q9UK80 565 aa12.95□□□□□ -0.34
CALCOCO1-213ENST00000549349 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-213ENST00000549349 EVA1CP58658 441 aa12.94□□□□□ -0.34
CALCOCO1-213ENST00000549349 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-213ENST00000549349 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-213ENST00000549349 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
CALCOCO1-213ENST00000549349 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 RALBP1Q15311 655 aa12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 FLT4P35916 1363 aa12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 ABCC6O95255 1503 aa12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-213ENST00000549349 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
CALCOCO1-213ENST00000549349 ANP32CO43423 234 aa12.92□□□□□ -0.34
CALCOCO1-213ENST00000549349 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 RTL1A6NKG5 1358 aa12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 INSRP06213 1382 aa12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO1-213ENST00000549349 ERBB3P21860 1342 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 GLI3P10071 1580 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 CCDC184Q52MB2 194 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-213ENST00000549349 ATRNO75882 1429 aa12.89□□□□□ -0.35
CALCOCO1-213ENST00000549349 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
CALCOCO1-213ENST00000549349 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
CALCOCO1-213ENST00000549349 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 IL13P35225 146 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 VPS72Q15906 364 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
CALCOCO1-213ENST00000549349 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-213ENST00000549349 EYA1Q99502 592 aa12.87□□□□□ -0.35
CALCOCO1-213ENST00000549349 CRB1P82279 1406 aa12.87□□□□□ -0.35
CALCOCO1-213ENST00000549349 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
CALCOCO1-213ENST00000549349 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-213ENST00000549349 MIER1Q8N108 512 aa12.86□□□□□ -0.35
CALCOCO1-213ENST00000549349 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-213ENST00000549349 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
CALCOCO1-213ENST00000549349 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
CALCOCO1-213ENST00000549349 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
CALCOCO1-213ENST00000549349 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-213ENST00000549349 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
CALCOCO1-213ENST00000549349 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-213ENST00000549349 HMOX1P09601 288 aa12.83□□□□□ -0.36
CALCOCO1-213ENST00000549349 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
CALCOCO1-213ENST00000549349 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
CALCOCO1-213ENST00000549349 RXRBP28702 533 aa12.82□□□□□ -0.36
CALCOCO1-213ENST00000549349 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
CALCOCO1-213ENST00000549349 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
CALCOCO1-213ENST00000549349 THSD7AQ9UPZ6 1657 aa12.82□□□□□ -0.36
CALCOCO1-213ENST00000549349 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
CALCOCO1-213ENST00000549349 MEGF6O75095 1541 aa12.81□□□□□ -0.36
CALCOCO1-213ENST00000549349 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 A0A0G2JS52 829 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 MYT1Q01538 1121 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
CALCOCO1-213ENST00000549349 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-213ENST00000549349 IL2RBP14784 551 aa12.78□□□□□ -0.36
CALCOCO1-213ENST00000549349 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
CALCOCO1-213ENST00000549349 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms