RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MEX3CQ5U5Q3 659 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-206ENST00000549274 IP6K1Q92551 441 aa13.11□□□□□ -0.31
SMARCD1-206ENST00000549274 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
SMARCD1-206ENST00000549274 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
SMARCD1-206ENST00000549274 MTHFSP49914 203 aa13.1□□□□□ -0.31
SMARCD1-206ENST00000549274 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-206ENST00000549274 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
SMARCD1-206ENST00000549274 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 HOXC9P31274 260 aa13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 COL18A1P39060 1754 aa13.09□□□□□ -0.31
SMARCD1-206ENST00000549274 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-206ENST00000549274 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
SMARCD1-206ENST00000549274 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 PEAK1Q9H792 1746 aa13.07□□□□□ -0.32
SMARCD1-206ENST00000549274 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
SMARCD1-206ENST00000549274 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
SMARCD1-206ENST00000549274 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
SMARCD1-206ENST00000549274 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
SMARCD1-206ENST00000549274 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
SMARCD1-206ENST00000549274 EVA1CP58658 441 aa13.05□□□□□ -0.32
SMARCD1-206ENST00000549274 WDR43Q15061 677 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCD1-206ENST00000549274 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
SMARCD1-206ENST00000549274 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 SLIT2O94813 1529 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 LRP6O75581 1613 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 ERBB3P21860 1342 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
SMARCD1-206ENST00000549274 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 NEFMP07197 916 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 BTG4Q9NY30 223 aa13.03□□□□□ -0.32
SMARCD1-206ENST00000549274 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
SMARCD1-206ENST00000549274 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
SMARCD1-206ENST00000549274 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.33
SMARCD1-206ENST00000549274 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
SMARCD1-206ENST00000549274 CRB1P82279 1406 aa13.02□□□□□ -0.33
SMARCD1-206ENST00000549274 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
SMARCD1-206ENST00000549274 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
SMARCD1-206ENST00000549274 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 FBLN1P23142 703 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 IL13P35225 146 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 MIER1Q8N108 512 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
SMARCD1-206ENST00000549274 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 RNF39Q9H2S5 420 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 USP21Q9UK80 565 aa13□□□□□ -0.33
SMARCD1-206ENST00000549274 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 AFF2P51816 1311 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 VPS72Q15906 364 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
SMARCD1-206ENST00000549274 FCHSD2O94868 740 aa12.98□□□□□ -0.33
SMARCD1-206ENST00000549274 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-206ENST00000549274 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMARCD1-206ENST00000549274 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-206ENST00000549274 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
SMARCD1-206ENST00000549274 KDRP35968 1356 aa12.97□□□□□ -0.33
SMARCD1-206ENST00000549274 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
SMARCD1-206ENST00000549274 RAPGEF4Q8WZA2 1011 aa12.97□□□□□ -0.33
SMARCD1-206ENST00000549274 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
SMARCD1-206ENST00000549274 EYA1Q99502 592 aa12.96□□□□□ -0.33
SMARCD1-206ENST00000549274 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
SMARCD1-206ENST00000549274 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
SMARCD1-206ENST00000549274 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 SPATA31A5Q5VU36 1347 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 SPATA31A7Q8IWB4 1347 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 NGEFQ8N5V2 710 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 PNISRQ8TF01 805 aaKnown RBP12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 ATRNO75882 1429 aa12.95□□□□□ -0.34
SMARCD1-206ENST00000549274 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 SULT6B1Q6IMI4 303 aa12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
SMARCD1-206ENST00000549274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.345e-8■■□□□ 11.6
SMARCD1-206ENST00000549274 IL2RBP14784 551 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms