RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
DDX54-206ENST00000549271 GCP02774 474 aa17.9■□□□□ 0.46
DDX54-206ENST00000549271 STK32BQ9NY57 414 aa17.9■□□□□ 0.46
DDX54-206ENST00000549271 PLEKHG3A1L390 1219 aa17.89■□□□□ 0.45
DDX54-206ENST00000549271 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
DDX54-206ENST00000549271 GOLGB1Q14789 3259 aaKnown RBP17.88■□□□□ 0.45
DDX54-206ENST00000549271 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
DDX54-206ENST00000549271 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
DDX54-206ENST00000549271 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
DDX54-206ENST00000549271 COL18A1P39060 1754 aa17.88■□□□□ 0.45
DDX54-206ENST00000549271 NLRP13Q86W25 1043 aa17.87■□□□□ 0.45
DDX54-206ENST00000549271 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
DDX54-206ENST00000549271 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
DDX54-206ENST00000549271 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
DDX54-206ENST00000549271 PAPPAQ13219 1627 aa17.85■□□□□ 0.45
DDX54-206ENST00000549271 ARXQ96QS3 562 aa17.85■□□□□ 0.45
DDX54-206ENST00000549271 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
DDX54-206ENST00000549271 SLIT3O75094 1523 aa17.84■□□□□ 0.45
DDX54-206ENST00000549271 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
DDX54-206ENST00000549271 CDCA7Q9BWT1 371 aaPredicted RBP17.82■□□□□ 0.44
DDX54-206ENST00000549271 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
DDX54-206ENST00000549271 NHSQ6T4R5 1651 aa17.81■□□□□ 0.44
DDX54-206ENST00000549271 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
DDX54-206ENST00000549271 RGPD5Q99666 1765 aa17.81■□□□□ 0.44
DDX54-206ENST00000549271 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
DDX54-206ENST00000549271 GPR162Q16538 588 aa17.8■□□□□ 0.44
DDX54-206ENST00000549271 DCAF11Q8TEB1 546 aa17.8■□□□□ 0.44
DDX54-206ENST00000549271 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
DDX54-206ENST00000549271 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
DDX54-206ENST00000549271 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
DDX54-206ENST00000549271 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
DDX54-206ENST00000549271 QSER1Q2KHR3 1735 aa17.77■□□□□ 0.44
DDX54-206ENST00000549271 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
DDX54-206ENST00000549271 BTAF1O14981 1849 aa17.75■□□□□ 0.43
DDX54-206ENST00000549271 NLRP6P59044 892 aa17.75■□□□□ 0.43
DDX54-206ENST00000549271 CARD10Q9BWT7 1032 aa17.75■□□□□ 0.43
DDX54-206ENST00000549271 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
DDX54-206ENST00000549271 USP6P35125 1406 aa17.74■□□□□ 0.43
DDX54-206ENST00000549271 CPSF1Q10570 1443 aaKnown RBP17.74■□□□□ 0.43
DDX54-206ENST00000549271 TNS2Q63HR2 1409 aa17.74■□□□□ 0.43
DDX54-206ENST00000549271 EXOC5O00471 708 aa17.74■□□□□ 0.43
DDX54-206ENST00000549271 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
DDX54-206ENST00000549271 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
DDX54-206ENST00000549271 ABCC6O95255 1503 aa17.72■□□□□ 0.43
DDX54-206ENST00000549271 ARHGEF25Q86VW2 580 aa17.71■□□□□ 0.43
DDX54-206ENST00000549271 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.42
DDX54-206ENST00000549271 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
DDX54-206ENST00000549271 CCDC7Q96M83 1385 aa17.7■□□□□ 0.42
DDX54-206ENST00000549271 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
DDX54-206ENST00000549271 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
DDX54-206ENST00000549271 LRRC4BQ9NT99 713 aa17.69■□□□□ 0.42
DDX54-206ENST00000549271 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
DDX54-206ENST00000549271 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
DDX54-206ENST00000549271 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
DDX54-206ENST00000549271 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
DDX54-206ENST00000549271 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
DDX54-206ENST00000549271 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
DDX54-206ENST00000549271 POLD1P28340 1107 aa17.67■□□□□ 0.42
DDX54-206ENST00000549271 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
DDX54-206ENST00000549271 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
DDX54-206ENST00000549271 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
DDX54-206ENST00000549271 NFAT5O94916 1531 aa17.66■□□□□ 0.42
DDX54-206ENST00000549271 ATP10DQ9P241 1426 aa17.65■□□□□ 0.42
DDX54-206ENST00000549271 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.423e-7■■□□□ 13.8
DDX54-206ENST00000549271 KCNH5Q8NCM2 988 aa17.65■□□□□ 0.42
DDX54-206ENST00000549271 PNPLA7Q6ZV29 1317 aa17.65■□□□□ 0.42
DDX54-206ENST00000549271 GRIN3BO60391 1043 aa17.64■□□□□ 0.41
DDX54-206ENST00000549271 HSPA6P17066 643 aa17.64■□□□□ 0.41
DDX54-206ENST00000549271 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
DDX54-206ENST00000549271 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
DDX54-206ENST00000549271 SLC27A3Q5K4L6 730 aa17.61■□□□□ 0.41
DDX54-206ENST00000549271 ADCY9O60503 1353 aa17.6■□□□□ 0.41
DDX54-206ENST00000549271 LY75O60449 1722 aa17.59■□□□□ 0.41
DDX54-206ENST00000549271 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
DDX54-206ENST00000549271 GPBP1L1Q9HC44 474 aaPredicted RBP17.59■□□□□ 0.41
DDX54-206ENST00000549271 SOX12O15370 315 aa17.58■□□□□ 0.4
DDX54-206ENST00000549271 IL2RBP14784 551 aa17.58■□□□□ 0.4
DDX54-206ENST00000549271 ERBB3P21860 1342 aa17.57■□□□□ 0.4
DDX54-206ENST00000549271 TFCP2L1Q9NZI6 479 aa17.57■□□□□ 0.4
DDX54-206ENST00000549271 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
DDX54-206ENST00000549271 LTN1O94822 1766 aa17.56■□□□□ 0.4
DDX54-206ENST00000549271 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
DDX54-206ENST00000549271 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
DDX54-206ENST00000549271 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
DDX54-206ENST00000549271 KCNQ4P56696 695 aa17.53■□□□□ 0.4
DDX54-206ENST00000549271 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.39
DDX54-206ENST00000549271 DOT1LQ8TEK3 1739 aa17.51■□□□□ 0.39
DDX54-206ENST00000549271 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
DDX54-206ENST00000549271 ZNF526Q8TF50 670 aaPredicted RBP17.5■□□□□ 0.39
DDX54-206ENST00000549271 NSD2O96028 1365 aa17.5■□□□□ 0.39
DDX54-206ENST00000549271 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
DDX54-206ENST00000549271 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
DDX54-206ENST00000549271 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
DDX54-206ENST00000549271 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
DDX54-206ENST00000549271 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
DDX54-206ENST00000549271 KIF3CO14782 793 aa17.47■□□□□ 0.39
DDX54-206ENST00000549271 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
DDX54-206ENST00000549271 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
DDX54-206ENST00000549271 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
DDX54-206ENST00000549271 DNAJC5GQ8N7S2 189 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms