RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.3
SMPDL3B-206ENST00000549094 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 IL16Q14005 1332 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 HSPA1LP34931 641 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 MTHFSP49914 203 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
SMPDL3B-206ENST00000549094 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
SMPDL3B-206ENST00000549094 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
SMPDL3B-206ENST00000549094 GOLGA6L3A6NEY3 463 aa16.93■□□□□ 0.3
SMPDL3B-206ENST00000549094 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
SMPDL3B-206ENST00000549094 MCM4P33991 863 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 CDC42BPGQ6DT37 1551 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
SMPDL3B-206ENST00000549094 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
SMPDL3B-206ENST00000549094 TNNT2P45379 298 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-206ENST00000549094 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
SMPDL3B-206ENST00000549094 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-206ENST00000549094 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 ATF3P18847 181 aa16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 PTMSP20962 102 aa16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
SMPDL3B-206ENST00000549094 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
SMPDL3B-206ENST00000549094 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
SMPDL3B-206ENST00000549094 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
SMPDL3B-206ENST00000549094 PNNQ9H307 717 aaKnown RBP16.89■□□□□ 0.29
SMPDL3B-206ENST00000549094 TNNQ9UQP3 1299 aa16.89■□□□□ 0.29
SMPDL3B-206ENST00000549094 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
SMPDL3B-206ENST00000549094 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
SMPDL3B-206ENST00000549094 KIF20BQ96Q89 1820 aa16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 AHDC1Q5TGY3 1603 aaPredicted RBP16.87■□□□□ 0.29
SMPDL3B-206ENST00000549094 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-206ENST00000549094 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
SMPDL3B-206ENST00000549094 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3B-206ENST00000549094 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 MST1RQ04912 1400 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 ATP7BP35670 1465 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 TRIM27P14373 513 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 MRE11P49959 708 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 SNX21Q969T3 373 aa16.85■□□□□ 0.29
SMPDL3B-206ENST00000549094 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
SMPDL3B-206ENST00000549094 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3B-206ENST00000549094 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
SMPDL3B-206ENST00000549094 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
SMPDL3B-206ENST00000549094 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
SMPDL3B-206ENST00000549094 RBM25P49756 843 aaKnown RBP16.83■□□□□ 0.28
SMPDL3B-206ENST00000549094 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
SMPDL3B-206ENST00000549094 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
SMPDL3B-206ENST00000549094 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3B-206ENST00000549094 TRAK2O60296 914 aa16.82■□□□□ 0.28
SMPDL3B-206ENST00000549094 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
SMPDL3B-206ENST00000549094 PLEKHF1Q96S99 279 aa16.82■□□□□ 0.28
SMPDL3B-206ENST00000549094 ITSN1Q15811 1721 aa16.82■□□□□ 0.28
SMPDL3B-206ENST00000549094 CABP1Q9NZU7 370 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 SSH1Q8WYL5 1049 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 RRAGDQ9NQL2 400 aaPredicted RBP16.81■□□□□ 0.28
SMPDL3B-206ENST00000549094 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
SMPDL3B-206ENST00000549094 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMPDL3B-206ENST00000549094 NUCB1Q02818 461 aa16.8■□□□□ 0.28
SMPDL3B-206ENST00000549094 ESCO1Q5FWF5 840 aa16.8■□□□□ 0.28
SMPDL3B-206ENST00000549094 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-206ENST00000549094 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
SMPDL3B-206ENST00000549094 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-206ENST00000549094 ZBTB40Q9NUA8 1239 aa16.79■□□□□ 0.28
SMPDL3B-206ENST00000549094 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
SMPDL3B-206ENST00000549094 TRIM35Q9UPQ4 493 aa16.79■□□□□ 0.28
SMPDL3B-206ENST00000549094 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 CLCN1P35523 988 aa16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 BRPF1P55201 1214 aaPredicted RBP16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 PHF8Q9UPP1 1060 aa16.78■□□□□ 0.28
SMPDL3B-206ENST00000549094 DDIT3P35638 169 aa16.77■□□□□ 0.27
SMPDL3B-206ENST00000549094 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.27
SMPDL3B-206ENST00000549094 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.27
SMPDL3B-206ENST00000549094 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.27
SMPDL3B-206ENST00000549094 ORAI2Q96SN7 254 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms