RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
CDX2-202ENST00000548877 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
CDX2-202ENST00000548877 PTGER2P43116 358 aa19.69■□□□□ 0.74
CDX2-202ENST00000548877 NLRP6P59044 892 aa19.69■□□□□ 0.74
CDX2-202ENST00000548877 PTF1AQ7RTS3 328 aa19.69■□□□□ 0.74
CDX2-202ENST00000548877 MARCH10Q8NA82 808 aaPredicted RBP19.69■□□□□ 0.74
CDX2-202ENST00000548877 PIK3C2AO00443 1686 aa19.68■□□□□ 0.74
CDX2-202ENST00000548877 TOM1L2Q6ZVM7 507 aa19.68■□□□□ 0.74
CDX2-202ENST00000548877 CABP2Q9NPB3 220 aa19.68■□□□□ 0.74
CDX2-202ENST00000548877 PDGFDQ9GZP0 370 aaPredicted RBP19.67■□□□□ 0.74
CDX2-202ENST00000548877 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
CDX2-202ENST00000548877 AXIN2Q9Y2T1 843 aa19.67■□□□□ 0.74
CDX2-202ENST00000548877 MYOM1P52179 1685 aa19.67■□□□□ 0.74
CDX2-202ENST00000548877 QRICH2Q9H0J4 1663 aa19.66■□□□□ 0.74
CDX2-202ENST00000548877 CPSF1Q10570 1443 aaKnown RBP19.66■□□□□ 0.74
CDX2-202ENST00000548877 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
CDX2-202ENST00000548877 CARD10Q9BWT7 1032 aa19.65■□□□□ 0.74
CDX2-202ENST00000548877 TXNRD1Q16881 649 aa19.64■□□□□ 0.73
CDX2-202ENST00000548877 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
CDX2-202ENST00000548877 CHD4Q14839 1912 aa19.63■□□□□ 0.73
CDX2-202ENST00000548877 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
CDX2-202ENST00000548877 SLC15A2Q16348 729 aa19.63■□□□□ 0.73
CDX2-202ENST00000548877 SGIP1Q9BQI5 828 aa19.63■□□□□ 0.73
CDX2-202ENST00000548877 ZNF784Q8NCA9 323 aaPredicted RBP19.62■□□□□ 0.73
CDX2-202ENST00000548877 KCNH5Q8NCM2 988 aa19.62■□□□□ 0.73
CDX2-202ENST00000548877 UTRNP46939 3433 aa19.61■□□□□ 0.73
CDX2-202ENST00000548877 ABCC6O95255 1503 aa19.61■□□□□ 0.73
CDX2-202ENST00000548877 ZBTB7CA1YPR0 619 aa19.61■□□□□ 0.73
CDX2-202ENST00000548877 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
CDX2-202ENST00000548877 STK32BQ9NY57 414 aa19.61■□□□□ 0.73
CDX2-202ENST00000548877 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
CDX2-202ENST00000548877 SYT17Q9BSW7 474 aa19.6■□□□□ 0.73
CDX2-202ENST00000548877 MTFR1LQ9H019 292 aa19.6■□□□□ 0.73
CDX2-202ENST00000548877 CCDC7Q96M83 1385 aa19.59■□□□□ 0.73
CDX2-202ENST00000548877 TTC21BQ7Z4L5 1316 aa19.59■□□□□ 0.73
CDX2-202ENST00000548877 EXOC5O00471 708 aa19.59■□□□□ 0.73
CDX2-202ENST00000548877 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
CDX2-202ENST00000548877 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
CDX2-202ENST00000548877 TTC21AQ8NDW8 1320 aa19.58■□□□□ 0.73
CDX2-202ENST00000548877 NFAT5O94916 1531 aa19.58■□□□□ 0.73
CDX2-202ENST00000548877 FHDC1Q9C0D6 1143 aaPredicted RBP19.58■□□□□ 0.72
CDX2-202ENST00000548877 TNS2Q63HR2 1409 aa19.58■□□□□ 0.72
CDX2-202ENST00000548877 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
CDX2-202ENST00000548877 EVC2Q86UK5 1308 aa19.57■□□□□ 0.72
CDX2-202ENST00000548877 PAPPAQ13219 1627 aa19.57■□□□□ 0.72
CDX2-202ENST00000548877 CSB-PGBD3P0DP91 1061 aa19.53■□□□□ 0.72
CDX2-202ENST00000548877 USP54Q70EL1 1684 aa19.52■□□□□ 0.72
CDX2-202ENST00000548877 ARXQ96QS3 562 aa19.51■□□□□ 0.71
CDX2-202ENST00000548877 USP31Q70CQ4 1352 aa19.51■□□□□ 0.71
CDX2-202ENST00000548877 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
CDX2-202ENST00000548877 BTAF1O14981 1849 aa19.5■□□□□ 0.71
CDX2-202ENST00000548877 MON2Q7Z3U7 1717 aa19.5■□□□□ 0.71
CDX2-202ENST00000548877 QSER1Q2KHR3 1735 aa19.49■□□□□ 0.71
CDX2-202ENST00000548877 ERBB3P21860 1342 aa19.49■□□□□ 0.71
CDX2-202ENST00000548877 C1QTNF8P60827 252 aa19.48■□□□□ 0.71
CDX2-202ENST00000548877 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
CDX2-202ENST00000548877 SOX12O15370 315 aa19.46■□□□□ 0.71
CDX2-202ENST00000548877 SLC16A10Q8TF71 515 aa19.46■□□□□ 0.71
CDX2-202ENST00000548877 IL2RBP14784 551 aa19.45■□□□□ 0.7
CDX2-202ENST00000548877 L3MBTL2Q969R5 705 aa19.45■□□□□ 0.7
CDX2-202ENST00000548877 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 AKT1S1Q96B36 256 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 ACSBG1Q96GR2 724 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 LRRC4BQ9NT99 713 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 LTN1O94822 1766 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
CDX2-202ENST00000548877 SBNO2Q9Y2G9 1366 aa19.43■□□□□ 0.7
CDX2-202ENST00000548877 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
CDX2-202ENST00000548877 NLRP2Q9NX02 1062 aa19.42■□□□□ 0.7
CDX2-202ENST00000548877 CD163L1Q9NR16 1453 aa19.41■□□□□ 0.7
CDX2-202ENST00000548877 SLC27A3Q5K4L6 730 aa19.41■□□□□ 0.7
CDX2-202ENST00000548877 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
CDX2-202ENST00000548877 GPR162Q16538 588 aa19.38■□□□□ 0.69
CDX2-202ENST00000548877 ANKRD24Q8TF21 1146 aa19.38■□□□□ 0.69
CDX2-202ENST00000548877 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
CDX2-202ENST00000548877 NME9Q86XW9 330 aa19.37■□□□□ 0.69
CDX2-202ENST00000548877 GOLGB1Q14789 3259 aaKnown RBP19.37■□□□□ 0.69
CDX2-202ENST00000548877 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
CDX2-202ENST00000548877 FAM208AQ9UK61 1670 aaKnown RBP19.36■□□□□ 0.69
CDX2-202ENST00000548877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDX2-202ENST00000548877 LY75O60449 1722 aa19.36■□□□□ 0.69
CDX2-202ENST00000548877 POLD1P28340 1107 aa19.35■□□□□ 0.69
CDX2-202ENST00000548877 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
CDX2-202ENST00000548877 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
CDX2-202ENST00000548877 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.68
CDX2-202ENST00000548877 IP6K1Q92551 441 aa19.33■□□□□ 0.68
CDX2-202ENST00000548877 ANKRD36BQ8N2N9 1353 aa19.32■□□□□ 0.68
CDX2-202ENST00000548877 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
CDX2-202ENST00000548877 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
CDX2-202ENST00000548877 NSD2O96028 1365 aa19.31■□□□□ 0.68
CDX2-202ENST00000548877 CEP350Q5VT06 3117 aa19.3■□□□□ 0.68
CDX2-202ENST00000548877 TFCP2L1Q9NZI6 479 aa19.3■□□□□ 0.68
CDX2-202ENST00000548877 NLGN2Q8NFZ4 835 aa19.29■□□□□ 0.68
CDX2-202ENST00000548877 DDX54Q8TDD1 881 aaKnown RBP19.29■□□□□ 0.68
CDX2-202ENST00000548877 SIN3AQ96ST3 1273 aa19.29■□□□□ 0.68
CDX2-202ENST00000548877 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
CDX2-202ENST00000548877 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
CDX2-202ENST00000548877 GRIN3BO60391 1043 aa19.28■□□□□ 0.68
CDX2-202ENST00000548877 IFFO2Q5TF58 517 aa19.28■□□□□ 0.68
CDX2-202ENST00000548877 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms