RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 CPSF1Q10570 1443 aaKnown RBP13.53□□□□□ -0.24
GCN1-205ENST00000548821 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
GCN1-205ENST00000548821 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
GCN1-205ENST00000548821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
GCN1-205ENST00000548821 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
GCN1-205ENST00000548821 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
GCN1-205ENST00000548821 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
GCN1-205ENST00000548821 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
GCN1-205ENST00000548821 SLIT3O75094 1523 aa13.51□□□□□ -0.25
GCN1-205ENST00000548821 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
GCN1-205ENST00000548821 PLSCR1O15162 318 aa13.51□□□□□ -0.25
GCN1-205ENST00000548821 SOX12O15370 315 aa13.51□□□□□ -0.25
GCN1-205ENST00000548821 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
GCN1-205ENST00000548821 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
GCN1-205ENST00000548821 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
GCN1-205ENST00000548821 TMF1P82094 1093 aa13.5□□□□□ -0.25
GCN1-205ENST00000548821 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
GCN1-205ENST00000548821 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
GCN1-205ENST00000548821 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
GCN1-205ENST00000548821 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
GCN1-205ENST00000548821 COG3Q96JB2 828 aa13.48□□□□□ -0.25
GCN1-205ENST00000548821 SLC12A5Q9H2X9 1139 aa13.48□□□□□ -0.25
GCN1-205ENST00000548821 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
GCN1-205ENST00000548821 ABCC6O95255 1503 aa13.48□□□□□ -0.25
GCN1-205ENST00000548821 ST20-MTHFSA0A0A6YYL1 179 aa13.47□□□□□ -0.25
GCN1-205ENST00000548821 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
GCN1-205ENST00000548821 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
GCN1-205ENST00000548821 BCL9O00512 1426 aa13.46□□□□□ -0.26
GCN1-205ENST00000548821 IL2RBP14784 551 aa13.45□□□□□ -0.26
GCN1-205ENST00000548821 NME9Q86XW9 330 aa13.44□□□□□ -0.26
GCN1-205ENST00000548821 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
GCN1-205ENST00000548821 PPP1R1BQ9UD71 204 aaPredicted RBP13.44□□□□□ -0.26
GCN1-205ENST00000548821 ERBB3P21860 1342 aa13.43□□□□□ -0.26
GCN1-205ENST00000548821 AMPHP49418 695 aa13.43□□□□□ -0.26
GCN1-205ENST00000548821 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
GCN1-205ENST00000548821 IP6K1Q92551 441 aa13.43□□□□□ -0.26
GCN1-205ENST00000548821 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
GCN1-205ENST00000548821 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
GCN1-205ENST00000548821 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
GCN1-205ENST00000548821 LRP5O75197 1615 aa13.42□□□□□ -0.26
GCN1-205ENST00000548821 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
GCN1-205ENST00000548821 TESK2Q96S53 571 aa13.41□□□□□ -0.26
GCN1-205ENST00000548821 STK32BQ9NY57 414 aa13.41□□□□□ -0.26
GCN1-205ENST00000548821 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
GCN1-205ENST00000548821 KCNQ2O43526 872 aa13.4□□□□□ -0.26
GCN1-205ENST00000548821 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
GCN1-205ENST00000548821 SRCAPQ6ZRS2 3230 aa13.39□□□□□ -0.27
GCN1-205ENST00000548821 NFAT5O94916 1531 aa13.39□□□□□ -0.27
GCN1-205ENST00000548821 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
GCN1-205ENST00000548821 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
GCN1-205ENST00000548821 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
GCN1-205ENST00000548821 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 USP47Q96K76 1375 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 COL18A1P39060 1754 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
GCN1-205ENST00000548821 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
GCN1-205ENST00000548821 HOXC9P31274 260 aa13.35□□□□□ -0.27
GCN1-205ENST00000548821 SLC15A2Q16348 729 aa13.35□□□□□ -0.27
GCN1-205ENST00000548821 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
GCN1-205ENST00000548821 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
GCN1-205ENST00000548821 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
GCN1-205ENST00000548821 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
GCN1-205ENST00000548821 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
GCN1-205ENST00000548821 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
GCN1-205ENST00000548821 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
GCN1-205ENST00000548821 LRRC37A3O60309 1634 aa13.33□□□□□ -0.28
GCN1-205ENST00000548821 FYB1O15117 783 aa13.33□□□□□ -0.28
GCN1-205ENST00000548821 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
GCN1-205ENST00000548821 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
GCN1-205ENST00000548821 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
GCN1-205ENST00000548821 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
GCN1-205ENST00000548821 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
GCN1-205ENST00000548821 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
GCN1-205ENST00000548821 PROM2Q8N271 834 aa13.31□□□□□ -0.28
GCN1-205ENST00000548821 SLC16A10Q8TF71 515 aa13.31□□□□□ -0.28
GCN1-205ENST00000548821 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
GCN1-205ENST00000548821 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
GCN1-205ENST00000548821 RREB1Q92766 1687 aa13.31□□□□□ -0.28
GCN1-205ENST00000548821 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
GCN1-205ENST00000548821 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
GCN1-205ENST00000548821 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
GCN1-205ENST00000548821 INSRP06213 1382 aa13.28□□□□□ -0.28
GCN1-205ENST00000548821 FLT4P35916 1363 aa13.28□□□□□ -0.28
GCN1-205ENST00000548821 POLD1P28340 1107 aa13.27□□□□□ -0.29
GCN1-205ENST00000548821 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
GCN1-205ENST00000548821 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
GCN1-205ENST00000548821 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.29
GCN1-205ENST00000548821 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
GCN1-205ENST00000548821 LTN1O94822 1766 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
GCN1-205ENST00000548821 PTF1AQ7RTS3 328 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
GCN1-205ENST00000548821 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
GCN1-205ENST00000548821 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms