RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 KCNQ2O43526 872 aa17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 SLIT3O75094 1523 aa17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
TRAFD1-205ENST00000548277 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
TRAFD1-205ENST00000548277 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
TRAFD1-205ENST00000548277 YY1P25490 414 aa17.13■□□□□ 0.33
TRAFD1-205ENST00000548277 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
TRAFD1-205ENST00000548277 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
TRAFD1-205ENST00000548277 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
TRAFD1-205ENST00000548277 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 PLSCR1O15162 318 aa17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 ROCK2O75116 1388 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-205ENST00000548277 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
TRAFD1-205ENST00000548277 EXOC5O00471 708 aa17.1■□□□□ 0.33
TRAFD1-205ENST00000548277 PROM2Q8N271 834 aa17.1■□□□□ 0.33
TRAFD1-205ENST00000548277 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
TRAFD1-205ENST00000548277 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
TRAFD1-205ENST00000548277 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
TRAFD1-205ENST00000548277 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
TRAFD1-205ENST00000548277 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
TRAFD1-205ENST00000548277 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
TRAFD1-205ENST00000548277 CARD10Q9BWT7 1032 aa17.08■□□□□ 0.32
TRAFD1-205ENST00000548277 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-205ENST00000548277 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
TRAFD1-205ENST00000548277 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
TRAFD1-205ENST00000548277 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
TRAFD1-205ENST00000548277 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
TRAFD1-205ENST00000548277 LTN1O94822 1766 aa17.06■□□□□ 0.32
TRAFD1-205ENST00000548277 CASZ1Q86V15 1759 aa17.05■□□□□ 0.32
TRAFD1-205ENST00000548277 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
TRAFD1-205ENST00000548277 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
TRAFD1-205ENST00000548277 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
TRAFD1-205ENST00000548277 NME9Q86XW9 330 aa17.04■□□□□ 0.32
TRAFD1-205ENST00000548277 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
TRAFD1-205ENST00000548277 NFAT5O94916 1531 aa17.02■□□□□ 0.32
TRAFD1-205ENST00000548277 MYOM1P52179 1685 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 SLC15A2Q16348 729 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
TRAFD1-205ENST00000548277 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
TRAFD1-205ENST00000548277 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-205ENST00000548277 BTAF1O14981 1849 aa16.98■□□□□ 0.31
TRAFD1-205ENST00000548277 PTGER2P43116 358 aa16.98■□□□□ 0.31
TRAFD1-205ENST00000548277 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
TRAFD1-205ENST00000548277 BCL9O00512 1426 aa16.97■□□□□ 0.31
TRAFD1-205ENST00000548277 IL2RBP14784 551 aa16.97■□□□□ 0.31
TRAFD1-205ENST00000548277 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
TRAFD1-205ENST00000548277 ERBB3P21860 1342 aa16.96■□□□□ 0.31
TRAFD1-205ENST00000548277 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
TRAFD1-205ENST00000548277 DDX54Q8TDD1 881 aaKnown RBP16.96■□□□□ 0.31
TRAFD1-205ENST00000548277 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
TRAFD1-205ENST00000548277 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
TRAFD1-205ENST00000548277 CD163L1Q9NR16 1453 aa16.95■□□□□ 0.3
TRAFD1-205ENST00000548277 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
TRAFD1-205ENST00000548277 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
TRAFD1-205ENST00000548277 CHD4Q14839 1912 aa16.94■□□□□ 0.3
TRAFD1-205ENST00000548277 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
TRAFD1-205ENST00000548277 FBLN1P23142 703 aa16.94■□□□□ 0.3
TRAFD1-205ENST00000548277 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
TRAFD1-205ENST00000548277 USP54Q70EL1 1684 aa16.92■□□□□ 0.3
TRAFD1-205ENST00000548277 KCNQ4P56696 695 aa16.92■□□□□ 0.3
TRAFD1-205ENST00000548277 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
TRAFD1-205ENST00000548277 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
TRAFD1-205ENST00000548277 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
TRAFD1-205ENST00000548277 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
TRAFD1-205ENST00000548277 LRRC4BQ9NT99 713 aa16.91■□□□□ 0.3
TRAFD1-205ENST00000548277 ABCC6O95255 1503 aa16.91■□□□□ 0.3
TRAFD1-205ENST00000548277 A0A1W2PP64 1363 aa16.9■□□□□ 0.3
TRAFD1-205ENST00000548277 ARXQ96QS3 562 aa16.9■□□□□ 0.3
TRAFD1-205ENST00000548277 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
TRAFD1-205ENST00000548277 IP6K1Q92551 441 aa16.89■□□□□ 0.29
TRAFD1-205ENST00000548277 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
TRAFD1-205ENST00000548277 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
TRAFD1-205ENST00000548277 AMPHP49418 695 aa16.87■□□□□ 0.29
TRAFD1-205ENST00000548277 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
TRAFD1-205ENST00000548277 ZNF784Q8NCA9 323 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-205ENST00000548277 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
TRAFD1-205ENST00000548277 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
TRAFD1-205ENST00000548277 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-205ENST00000548277 COG3Q96JB2 828 aa16.86■□□□□ 0.29
TRAFD1-205ENST00000548277 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
TRAFD1-205ENST00000548277 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
TRAFD1-205ENST00000548277 HOXC9P31274 260 aa16.84■□□□□ 0.29
TRAFD1-205ENST00000548277 GPR162Q16538 588 aa16.84■□□□□ 0.29
TRAFD1-205ENST00000548277 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
TRAFD1-205ENST00000548277 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
TRAFD1-205ENST00000548277 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
TRAFD1-205ENST00000548277 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
TRAFD1-205ENST00000548277 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
TRAFD1-205ENST00000548277 MSH5O43196 834 aa16.82■□□□□ 0.28
TRAFD1-205ENST00000548277 RRS1Q15050 365 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms