RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-212ENST00000548161 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-212ENST00000548161 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-212ENST00000548161 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
R3HDM2-212ENST00000548161 PROM2Q8N271 834 aa12.19□□□□□ -0.46
R3HDM2-212ENST00000548161 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
R3HDM2-212ENST00000548161 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
R3HDM2-212ENST00000548161 BCL9O00512 1426 aa12.19□□□□□ -0.46
R3HDM2-212ENST00000548161 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 YY1P25490 414 aa12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 PIK3C2AO00443 1686 aa12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 CPSF1Q10570 1443 aaKnown RBP12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
R3HDM2-212ENST00000548161 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
R3HDM2-212ENST00000548161 LRRC37A3O60309 1634 aa12.17□□□□□ -0.46
R3HDM2-212ENST00000548161 NINLQ9Y2I6 1382 aa12.17□□□□□ -0.46
R3HDM2-212ENST00000548161 TTC21AQ8NDW8 1320 aa12.16□□□□□ -0.46
R3HDM2-212ENST00000548161 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
R3HDM2-212ENST00000548161 EXOC5O00471 708 aa12.15□□□□□ -0.46
R3HDM2-212ENST00000548161 CSB-PGBD3P0DP91 1061 aa12.15□□□□□ -0.46
R3HDM2-212ENST00000548161 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
R3HDM2-212ENST00000548161 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
R3HDM2-212ENST00000548161 SOX12O15370 315 aa12.14□□□□□ -0.47
R3HDM2-212ENST00000548161 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
R3HDM2-212ENST00000548161 RGPD5Q99666 1765 aa12.14□□□□□ -0.47
R3HDM2-212ENST00000548161 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
R3HDM2-212ENST00000548161 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
R3HDM2-212ENST00000548161 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
R3HDM2-212ENST00000548161 ROCK2O75116 1388 aaKnown RBP12.13□□□□□ -0.47
R3HDM2-212ENST00000548161 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
R3HDM2-212ENST00000548161 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
R3HDM2-212ENST00000548161 NFAT5O94916 1531 aa12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 PTGER2P43116 358 aa12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
R3HDM2-212ENST00000548161 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
R3HDM2-212ENST00000548161 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
R3HDM2-212ENST00000548161 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
R3HDM2-212ENST00000548161 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
R3HDM2-212ENST00000548161 ABCC6O95255 1503 aa12.1□□□□□ -0.47
R3HDM2-212ENST00000548161 SBNO2Q9Y2G9 1366 aa12.09□□□□□ -0.47
R3HDM2-212ENST00000548161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.09□□□□□ -0.47
R3HDM2-212ENST00000548161 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
R3HDM2-212ENST00000548161 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
R3HDM2-212ENST00000548161 ERBB3P21860 1342 aa12.09□□□□□ -0.47
R3HDM2-212ENST00000548161 NME9Q86XW9 330 aa12.08□□□□□ -0.48
R3HDM2-212ENST00000548161 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
R3HDM2-212ENST00000548161 IL2RBP14784 551 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 MTFR1LQ9H019 292 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 CD163L1Q9NR16 1453 aa12.07□□□□□ -0.48
R3HDM2-212ENST00000548161 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
R3HDM2-212ENST00000548161 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
R3HDM2-212ENST00000548161 MYOM1P52179 1685 aa12.06□□□□□ -0.48
R3HDM2-212ENST00000548161 HDGFL2Q7Z4V5 671 aaPredicted RBP12.05□□□□□ -0.48
R3HDM2-212ENST00000548161 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
R3HDM2-212ENST00000548161 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
R3HDM2-212ENST00000548161 USP54Q70EL1 1684 aa12.05□□□□□ -0.48
R3HDM2-212ENST00000548161 PUS7Q96PZ0 661 aaKnown RBP12.04□□□□□ -0.48
R3HDM2-212ENST00000548161 CARD11Q9BXL7 1154 aa12.04□□□□□ -0.48
R3HDM2-212ENST00000548161 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
R3HDM2-212ENST00000548161 IP6K1Q92551 441 aa12.03□□□□□ -0.48
R3HDM2-212ENST00000548161 ARXQ96QS3 562 aa12.03□□□□□ -0.48
R3HDM2-212ENST00000548161 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
R3HDM2-212ENST00000548161 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
R3HDM2-212ENST00000548161 LTN1O94822 1766 aa12.02□□□□□ -0.48
R3HDM2-212ENST00000548161 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.49
R3HDM2-212ENST00000548161 CEP350Q5VT06 3117 aa12.02□□□□□ -0.49
R3HDM2-212ENST00000548161 BTAF1O14981 1849 aa12.02□□□□□ -0.49
R3HDM2-212ENST00000548161 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
R3HDM2-212ENST00000548161 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
R3HDM2-212ENST00000548161 A0A1W2PP64 1363 aa12.01□□□□□ -0.49
R3HDM2-212ENST00000548161 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
R3HDM2-212ENST00000548161 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
R3HDM2-212ENST00000548161 DDX54Q8TDD1 881 aaKnown RBP12□□□□□ -0.49
R3HDM2-212ENST00000548161 AKT1S1Q96B36 256 aa12□□□□□ -0.49
R3HDM2-212ENST00000548161 CHD4Q14839 1912 aa11.99□□□□□ -0.49
R3HDM2-212ENST00000548161 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
R3HDM2-212ENST00000548161 LTV1Q96GA3 475 aaPredicted RBP11.98□□□□□ -0.49
R3HDM2-212ENST00000548161 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
R3HDM2-212ENST00000548161 HOXC9P31274 260 aa11.97□□□□□ -0.49
R3HDM2-212ENST00000548161 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
R3HDM2-212ENST00000548161 COG3Q96JB2 828 aa11.97□□□□□ -0.49
R3HDM2-212ENST00000548161 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.49
R3HDM2-212ENST00000548161 FBLN1P23142 703 aa11.96□□□□□ -0.49
R3HDM2-212ENST00000548161 TESK2Q96S53 571 aa11.96□□□□□ -0.49
R3HDM2-212ENST00000548161 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.49
R3HDM2-212ENST00000548161 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 ST20-MTHFSA0A0A6YYL1 179 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 POLD1P28340 1107 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms