RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
CEP290-204ENST00000547926 SSTR3P32745 418 aaPredicted RBP6.5□□□□□ -1.37
CEP290-204ENST00000547926 INSM2Q96T92 566 aaPredicted RBP6.5□□□□□ -1.37
CEP290-204ENST00000547926 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
CEP290-204ENST00000547926 C1QTNF2Q9BXJ5 285 aa6.49□□□□□ -1.37
CEP290-204ENST00000547926 PPP1R26Q5T8A7 1209 aaPredicted RBP6.49□□□□□ -1.37
CEP290-204ENST00000547926 Q6ZVU0 165 aa6.49□□□□□ -1.37
CEP290-204ENST00000547926 VASH1Q7L8A9 365 aaPredicted RBP6.49□□□□□ -1.37
CEP290-204ENST00000547926 CCDC116Q8IYX3 515 aa6.49□□□□□ -1.37
CEP290-204ENST00000547926 FURINP09958 794 aa6.48□□□□□ -1.37
CEP290-204ENST00000547926 BPHLQ86WA6 291 aaPredicted RBP6.48□□□□□ -1.37
CEP290-204ENST00000547926 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
CEP290-204ENST00000547926 GPR25O00155 361 aa6.47□□□□□ -1.37
CEP290-204ENST00000547926 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
CEP290-204ENST00000547926 HRCP23327 699 aa6.47□□□□□ -1.37
CEP290-204ENST00000547926 RELBQ01201 579 aa6.47□□□□□ -1.37
CEP290-204ENST00000547926 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
CEP290-204ENST00000547926 CABLES1Q8TDN4 633 aa6.47□□□□□ -1.37
CEP290-204ENST00000547926 ZNF395Q9H8N7 513 aaPredicted RBP6.47□□□□□ -1.37
CEP290-204ENST00000547926 GALNT6Q8NCL4 622 aa6.46□□□□□ -1.37
CEP290-204ENST00000547926 EMILIN1Q9Y6C2 1016 aa6.46□□□□□ -1.37
CEP290-204ENST00000547926 CARD14Q9BXL6 1004 aa6.46□□□□□ -1.38
CEP290-204ENST00000547926 MAP3K10Q02779 954 aa6.45□□□□□ -1.38
CEP290-204ENST00000547926 SH3BP5LQ7L8J4 393 aa6.45□□□□□ -1.38
CEP290-204ENST00000547926 RNF217Q8TC41 542 aa6.45□□□□□ -1.38
CEP290-204ENST00000547926 KRBA1A5PL33 1030 aa6.44□□□□□ -1.38
CEP290-204ENST00000547926 ITGB7P26010 798 aa6.44□□□□□ -1.38
CEP290-204ENST00000547926 MAP4K5Q9Y4K4 846 aa6.44□□□□□ -1.38
CEP290-204ENST00000547926 SPDYE5A6NIY4 337 aa6.44□□□□□ -1.38
CEP290-204ENST00000547926 BAG6P46379 1132 aa6.44□□□□□ -1.38
CEP290-204ENST00000547926 SNRPNP63162 240 aaKnown RBP6.43□□□□□ -1.38
CEP290-204ENST00000547926 RSBN1LQ6PCB5 846 aaPredicted RBP6.43□□□□□ -1.38
CEP290-204ENST00000547926 CSPP1Q1MSJ5 1256 aa6.43□□□□□ -1.38
CEP290-204ENST00000547926 KRI1Q8N9T8 703 aaKnown RBP6.43□□□□□ -1.38
CEP290-204ENST00000547926 ACDQ96AP0 544 aa6.43□□□□□ -1.38
CEP290-204ENST00000547926 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
CEP290-204ENST00000547926 TBC1D2Q9BYX2 928 aa6.42□□□□□ -1.38
CEP290-204ENST00000547926 POLMQ9NP87 494 aaPredicted RBP6.42□□□□□ -1.38
CEP290-204ENST00000547926 ERFEQ4G0M1 354 aa6.41□□□□□ -1.38
CEP290-204ENST00000547926 FOXD4L5Q5VV16 416 aaPredicted RBP6.41□□□□□ -1.38
CEP290-204ENST00000547926 KDF1Q8NAX2 398 aaPredicted RBP6.41□□□□□ -1.38
CEP290-204ENST00000547926 TSC1Q92574 1164 aa6.41□□□□□ -1.38
CEP290-204ENST00000547926 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
CEP290-204ENST00000547926 IGF1RP08069 1367 aa6.41□□□□□ -1.38
CEP290-204ENST00000547926 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
CEP290-204ENST00000547926 COL8A1P27658 744 aa6.4□□□□□ -1.38
CEP290-204ENST00000547926 QPCTQ16769 361 aa6.4□□□□□ -1.38
CEP290-204ENST00000547926 BEND7Q8N7W2 519 aaPredicted RBP6.4□□□□□ -1.38
CEP290-204ENST00000547926 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
CEP290-204ENST00000547926 NEDD1Q8NHV4 660 aa6.4□□□□□ -1.39
CEP290-204ENST00000547926 RHOQP17081 205 aa6.39□□□□□ -1.39
CEP290-204ENST00000547926 ZNF837Q96EG3 531 aaPredicted RBP6.39□□□□□ -1.39
CEP290-204ENST00000547926 TMPRSS4Q9NRS4 437 aa6.39□□□□□ -1.39
CEP290-204ENST00000547926 PHF20L1A8MW92 1017 aa6.38□□□□□ -1.39
CEP290-204ENST00000547926 ADD1P35611 737 aaKnown RBP6.38□□□□□ -1.39
CEP290-204ENST00000547926 DBN1Q16643 649 aa6.38□□□□□ -1.39
CEP290-204ENST00000547926 GIGYF2Q6Y7W6 1299 aaKnown RBP6.38□□□□□ -1.39
CEP290-204ENST00000547926 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
CEP290-204ENST00000547926 KRTAP9-4Q9BYQ2 154 aa6.38□□□□□ -1.39
CEP290-204ENST00000547926 BCRP11274 1271 aa6.37□□□□□ -1.39
CEP290-204ENST00000547926 TTLL12Q14166 644 aaPredicted RBP6.37□□□□□ -1.39
CEP290-204ENST00000547926 KCTD15Q96SI1 283 aaPredicted RBP6.37□□□□□ -1.39
CEP290-204ENST00000547926 ENAMQ9NRM1 1142 aa6.37□□□□□ -1.39
CEP290-204ENST00000547926 C1orf229Q6ZS94 237 aaPredicted RBP6.37□□□□□ -1.39
CEP290-204ENST00000547926 PRICKLE2Q7Z3G6 844 aa6.37□□□□□ -1.39
CEP290-204ENST00000547926 MBIPQ9NS73 344 aa6.37□□□□□ -1.39
CEP290-204ENST00000547926 INTS6LQ5JSJ4 861 aaKnown RBP6.36□□□□□ -1.39
CEP290-204ENST00000547926 ZBTB3Q9H5J0 574 aa6.36□□□□□ -1.39
CEP290-204ENST00000547926 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
CEP290-204ENST00000547926 OCSTAMPQ9BR26 566 aa6.35□□□□□ -1.39
CEP290-204ENST00000547926 LIMD1Q9UGP4 676 aa6.35□□□□□ -1.39
CEP290-204ENST00000547926 SHISA8B8ZZ34 492 aa6.34□□□□□ -1.39
CEP290-204ENST00000547926 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
CEP290-204ENST00000547926 PODNQ7Z5L7 613 aa6.34□□□□□ -1.4
CEP290-204ENST00000547926 ZNF784Q8NCA9 323 aaPredicted RBP6.34□□□□□ -1.4
CEP290-204ENST00000547926 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.4
CEP290-204ENST00000547926 RAB15P59190 212 aa6.33□□□□□ -1.4
CEP290-204ENST00000547926 RIC3Q7Z5B4 369 aa6.33□□□□□ -1.4
CEP290-204ENST00000547926 LILRA1O75019 489 aa6.32□□□□□ -1.4
CEP290-204ENST00000547926 GJA5P36382 358 aa6.32□□□□□ -1.4
CEP290-204ENST00000547926 RTL5Q5HYW3 569 aaPredicted RBP6.32□□□□□ -1.4
CEP290-204ENST00000547926 NBPF14Q5TI25 921 aa6.32□□□□□ -1.4
CEP290-204ENST00000547926 RIPOR1Q6ZS17 1223 aa6.31□□□□□ -1.4
CEP290-204ENST00000547926 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
CEP290-204ENST00000547926 TRIM22Q8IYM9 498 aa6.31□□□□□ -1.4
CEP290-204ENST00000547926 OIP5O43482 229 aa6.3□□□□□ -1.4
CEP290-204ENST00000547926 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
CEP290-204ENST00000547926 FOXD4L6Q3SYB3 417 aaPredicted RBP6.3□□□□□ -1.4
CEP290-204ENST00000547926 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
CEP290-204ENST00000547926 FOXD4L3Q6VB84 417 aaPredicted RBP6.3□□□□□ -1.4
CEP290-204ENST00000547926 THBS1P07996 1170 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 ARMC2Q8NEN0 867 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 C1QTNF9BB2RNN3 333 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 ADH1AP07327 375 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 AMHR2Q16671 573 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 KDM2AQ9Y2K7 1162 aa6.29□□□□□ -1.4
CEP290-204ENST00000547926 PTGIRP43119 386 aa6.28□□□□□ -1.4
CEP290-204ENST00000547926 CHRNA4P43681 627 aa6.28□□□□□ -1.4
CEP290-204ENST00000547926 PARP9Q8IXQ6 854 aa6.28□□□□□ -1.4
CEP290-204ENST00000547926 SLC10A4Q96EP9 437 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms