RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SPINT1O43278 529 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 LILRB3O75022 631 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 GSK3AP49840 483 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 FOXK2Q01167 660 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 Q6ZVU0 165 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 CNTNAP3BQ96NU0 1288 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 CNTNAP3Q9BZ76 1288 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 ADAMTS8Q9UP79 889 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 TRIM66O15016 1216 aa6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 SLC10A4Q96EP9 437 aa6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 COL25A1Q9BXS0 654 aaPredicted RBP6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
DEPDC4-204ENST00000547823 KRT76Q01546 638 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 ERFEQ4G0M1 354 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 PPP1R26Q5T8A7 1209 aaPredicted RBP6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 MYSM1Q5VVJ2 828 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 PDXDC2PQ6P474 469 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 SVOPQ8N4V2 548 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 RSPH6AQ9H0K4 717 aa6.46□□□□□ -1.38
DEPDC4-204ENST00000547823 SLURP2P0DP57 97 aa6.45□□□□□ -1.38
DEPDC4-204ENST00000547823 SV2AQ7L0J3 742 aa6.45□□□□□ -1.38
DEPDC4-204ENST00000547823 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-204ENST00000547823 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 ITGA6P23229 1130 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 CLK2P49760 499 aaKnown RBP6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 QPCTQ16769 361 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 ZNF385CQ66K41 422 aaPredicted RBP6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 PNMA1Q8ND90 353 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 ARHGAP9Q9BRR9 750 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 CARD14Q9BXL6 1004 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 LIMD1Q9UGP4 676 aa6.44□□□□□ -1.38
DEPDC4-204ENST00000547823 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
DEPDC4-204ENST00000547823 NBPF20Q3BBV1 942 aa6.43□□□□□ -1.38
DEPDC4-204ENST00000547823 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
DEPDC4-204ENST00000547823 KCTD15Q96SI1 283 aaPredicted RBP6.43□□□□□ -1.38
DEPDC4-204ENST00000547823 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
DEPDC4-204ENST00000547823 MAP3K10Q02779 954 aa6.42□□□□□ -1.38
DEPDC4-204ENST00000547823 ZBTB33Q86T24 672 aa6.42□□□□□ -1.38
DEPDC4-204ENST00000547823 FKBPLQ9UIM3 349 aa6.42□□□□□ -1.38
DEPDC4-204ENST00000547823 FIGNL2A6NMB9 653 aa6.41□□□□□ -1.38
DEPDC4-204ENST00000547823 PTK2Q05397 1052 aa6.41□□□□□ -1.38
DEPDC4-204ENST00000547823 ENAMQ9NRM1 1142 aa6.41□□□□□ -1.38
DEPDC4-204ENST00000547823 CDC14CA4D256 554 aa6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 ARHGEF15O94989 841 aa6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 PDE4DQ08499 809 aa6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 CBLBQ13191 982 aa6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 GMCL1Q96IK5 515 aa6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 POLMQ9NP87 494 aaPredicted RBP6.4□□□□□ -1.38
DEPDC4-204ENST00000547823 IRS1P35568 1242 aa6.39□□□□□ -1.39
DEPDC4-204ENST00000547823 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
DEPDC4-204ENST00000547823 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
DEPDC4-204ENST00000547823 RNFT1Q5M7Z0 435 aa6.39□□□□□ -1.39
DEPDC4-204ENST00000547823 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
DEPDC4-204ENST00000547823 RTL5Q5HYW3 569 aaPredicted RBP6.38□□□□□ -1.39
DEPDC4-204ENST00000547823 RNF217Q8TC41 542 aa6.38□□□□□ -1.39
DEPDC4-204ENST00000547823 PHF20L1A8MW92 1017 aa6.37□□□□□ -1.39
DEPDC4-204ENST00000547823 ADH1AP07327 375 aa6.37□□□□□ -1.39
DEPDC4-204ENST00000547823 CTSOP43234 321 aaPredicted RBP6.37□□□□□ -1.39
DEPDC4-204ENST00000547823 RELBQ01201 579 aa6.37□□□□□ -1.39
DEPDC4-204ENST00000547823 GPAT2Q6NUI2 795 aa6.37□□□□□ -1.39
DEPDC4-204ENST00000547823 ADAMTS2O95450 1211 aa6.36□□□□□ -1.39
DEPDC4-204ENST00000547823 FOXR1Q6PIV2 292 aa6.36□□□□□ -1.39
DEPDC4-204ENST00000547823 CCDC125Q86Z20 511 aa6.36□□□□□ -1.39
DEPDC4-204ENST00000547823 INSM2Q96T92 566 aaPredicted RBP6.36□□□□□ -1.39
DEPDC4-204ENST00000547823 CTDSPL2Q05D32 466 aa6.35□□□□□ -1.39
DEPDC4-204ENST00000547823 SEPT12Q8IYM1 358 aa6.35□□□□□ -1.39
DEPDC4-204ENST00000547823 PPP2R2DQ66LE6 453 aa6.34□□□□□ -1.39
DEPDC4-204ENST00000547823 LYSMD3Q7Z3D4 306 aa6.34□□□□□ -1.39
DEPDC4-204ENST00000547823 PODNQ7Z5L7 613 aa6.34□□□□□ -1.39
DEPDC4-204ENST00000547823 WHAMMQ8TF30 809 aa6.34□□□□□ -1.39
DEPDC4-204ENST00000547823 AGBL1Q96MI9 1066 aa6.34□□□□□ -1.39
DEPDC4-204ENST00000547823 PTGIRP43119 386 aa6.33□□□□□ -1.4
DEPDC4-204ENST00000547823 ADAM32Q8TC27 787 aa6.33□□□□□ -1.4
DEPDC4-204ENST00000547823 MBIPQ9NS73 344 aa6.33□□□□□ -1.4
DEPDC4-204ENST00000547823 LRRC4BQ9NT99 713 aa6.33□□□□□ -1.4
DEPDC4-204ENST00000547823 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
DEPDC4-204ENST00000547823 GPC1P35052 558 aa6.32□□□□□ -1.4
DEPDC4-204ENST00000547823 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
DEPDC4-204ENST00000547823 ZNF784Q8NCA9 323 aaPredicted RBP6.32□□□□□ -1.4
DEPDC4-204ENST00000547823 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
DEPDC4-204ENST00000547823 H7C1W4 665 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 CELA2BP08218 269 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 NR6A1Q15406 480 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 SKIV2LQ15477 1246 aaKnown RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 SH3D19Q5HYK7 790 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 FOXD4L5Q5VV16 416 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 LYPD4Q6UWN0 246 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 TRIM22Q8IYM9 498 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 BEND7Q8N7W2 519 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 LRRN4Q8WUT4 740 aa6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 NSFL1CQ9UNZ2 370 aaKnown RBP6.31□□□□□ -1.4
DEPDC4-204ENST00000547823 ESPNB1AK53 854 aa6.3□□□□□ -1.4
DEPDC4-204ENST00000547823 MSTNO14793 375 aa6.3□□□□□ -1.4
DEPDC4-204ENST00000547823 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
DEPDC4-204ENST00000547823 TRERF1Q96PN7 1200 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms