RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 CRB1P82279 1406 aa32.32■■■□□ 2.76
CTDSP2-203ENST00000547701 LARP1Q6PKG0 1096 aaKnown RBP32.31■■■□□ 2.76
CTDSP2-203ENST00000547701 CARD14Q9BXL6 1004 aa32.31■■■□□ 2.76
CTDSP2-203ENST00000547701 LTN1O94822 1766 aa32.3■■■□□ 2.76
CTDSP2-203ENST00000547701 RGPD5Q99666 1765 aa32.3■■■□□ 2.76
CTDSP2-203ENST00000547701 FAM98CQ17RN3 349 aaKnown RBP32.3■■■□□ 2.76
CTDSP2-203ENST00000547701 COG3Q96JB2 828 aa32.3■■■□□ 2.76
CTDSP2-203ENST00000547701 WDR17Q8IZU2 1322 aa32.28■■■□□ 2.76
CTDSP2-203ENST00000547701 TCP11L2Q8N4U5 519 aa32.28■■■□□ 2.76
CTDSP2-203ENST00000547701 CCDC125Q86Z20 511 aa32.27■■■□□ 2.76
CTDSP2-203ENST00000547701 KIF20BQ96Q89 1820 aa32.27■■■□□ 2.76
CTDSP2-203ENST00000547701 KRT27Q7Z3Y8 459 aa32.25■■■□□ 2.75
CTDSP2-203ENST00000547701 C11orf95C9JLR9 678 aaPredicted RBP32.23■■■□□ 2.75
CTDSP2-203ENST00000547701 BLMP54132 1417 aaPredicted RBP32.23■■■□□ 2.75
CTDSP2-203ENST00000547701 NSD3Q9BZ95 1437 aa32.22■■■□□ 2.75
CTDSP2-203ENST00000547701 SOX12O15370 315 aa32.21■■■□□ 2.75
CTDSP2-203ENST00000547701 PARP4Q9UKK3 1724 aaKnown RBP32.2■■■□□ 2.75
CTDSP2-203ENST00000547701 IP6K1Q92551 441 aa32.2■■■□□ 2.75
CTDSP2-203ENST00000547701 CARD10Q9BWT7 1032 aa32.2■■■□□ 2.75
CTDSP2-203ENST00000547701 ERBB3P21860 1342 aa32.19■■■□□ 2.74
CTDSP2-203ENST00000547701 ZBTB7CA1YPR0 619 aa32.18■■■□□ 2.74
CTDSP2-203ENST00000547701 GGNBP2Q9H3C7 697 aa32.18■■■□□ 2.74
CTDSP2-203ENST00000547701 CGNL1Q0VF96 1302 aa32.18■■■□□ 2.74
CTDSP2-203ENST00000547701 KIF24Q5T7B8 1368 aa32.18■■■□□ 2.74
CTDSP2-203ENST00000547701 TOM1L2Q6ZVM7 507 aa32.17■■■□□ 2.74
CTDSP2-203ENST00000547701 CDCA7Q9BWT1 371 aaPredicted RBP32.17■■■□□ 2.74
CTDSP2-203ENST00000547701 RTL1A6NKG5 1358 aa32.16■■■□□ 2.74
CTDSP2-203ENST00000547701 CCDC7Q96M83 1385 aa32.16■■■□□ 2.74
CTDSP2-203ENST00000547701 WNK3Q9BYP7 1800 aa32.15■■■□□ 2.74
CTDSP2-203ENST00000547701 USP35Q9P2H5 1018 aa32.15■■■□□ 2.74
CTDSP2-203ENST00000547701 MAP3K19Q56UN5 1328 aa32.15■■■□□ 2.74
CTDSP2-203ENST00000547701 KIF7Q2M1P5 1343 aa32.13■■■□□ 2.73
CTDSP2-203ENST00000547701 FAM208AQ9UK61 1670 aaKnown RBP32.13■■■□□ 2.73
CTDSP2-203ENST00000547701 PANK3Q9H999 370 aa32.12■■■□□ 2.73
CTDSP2-203ENST00000547701 DISP2A7MBM2 1401 aa32.11■■■□□ 2.73
CTDSP2-203ENST00000547701 A0A0G2JS52 829 aa32.11■■■□□ 2.73
CTDSP2-203ENST00000547701 MYT1Q01538 1121 aa32.11■■■□□ 2.73
CTDSP2-203ENST00000547701 ANKRD26Q9UPS8 1709 aa32.1■■■□□ 2.73
CTDSP2-203ENST00000547701 NSD2O96028 1365 aa32.09■■■□□ 2.73
CTDSP2-203ENST00000547701 HOXC9P31274 260 aa32.09■■■□□ 2.73
CTDSP2-203ENST00000547701 CSB-PGBD3P0DP91 1061 aa32.08■■■□□ 2.73
CTDSP2-203ENST00000547701 ANKRD24Q8TF21 1146 aa32.08■■■□□ 2.73
CTDSP2-203ENST00000547701 POLR3GLQ9BT43 218 aa32.08■■■□□ 2.73
CTDSP2-203ENST00000547701 FAM196AQ6ZSG2 479 aa32.06■■■□□ 2.72
CTDSP2-203ENST00000547701 FBLN1P23142 703 aa32.05■■■□□ 2.72
CTDSP2-203ENST00000547701 LRRC37A3O60309 1634 aa32.04■■■□□ 2.72
CTDSP2-203ENST00000547701 AMPHP49418 695 aa32.04■■■□□ 2.72
CTDSP2-203ENST00000547701 PDE3BQ13370 1112 aa32.04■■■□□ 2.72
CTDSP2-203ENST00000547701 BCL9O00512 1426 aa32.03■■■□□ 2.72
CTDSP2-203ENST00000547701 INSRP06213 1382 aa32.02■■■□□ 2.72
CTDSP2-203ENST00000547701 FLT4P35916 1363 aa32.02■■■□□ 2.72
CTDSP2-203ENST00000547701 MAP2P11137 1827 aaKnown RBP32.02■■■□□ 2.72
CTDSP2-203ENST00000547701 RRS1Q15050 365 aaKnown RBP32.01■■■□□ 2.71
CTDSP2-203ENST00000547701 DDB1Q16531 1140 aa32.01■■■□□ 2.71
CTDSP2-203ENST00000547701 RGPD1P0DJD0 1748 aa32■■■□□ 2.71
CTDSP2-203ENST00000547701 PEAK1Q9H792 1746 aa32■■■□□ 2.71
CTDSP2-203ENST00000547701 NLRP2Q9NX02 1062 aa31.99■■■□□ 2.71
CTDSP2-203ENST00000547701 PER1O15534 1290 aaPredicted RBP31.98■■■□□ 2.71
CTDSP2-203ENST00000547701 WASHC2AQ641Q2 1341 aa31.97■■■□□ 2.71
CTDSP2-203ENST00000547701 KNSTRNQ9Y448 316 aa31.96■■■□□ 2.71
CTDSP2-203ENST00000547701 OVOS2A0A0G2JMS6 1433 aa31.94■■■□□ 2.7
CTDSP2-203ENST00000547701 IL2RBP14784 551 aa31.94■■■□□ 2.7
CTDSP2-203ENST00000547701 SF3B2Q13435 895 aaKnown RBP31.94■■■□□ 2.7
CTDSP2-203ENST00000547701 TNS2Q63HR2 1409 aa31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 TNS1Q9HBL0 1735 aaKnown RBP31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 EXOC5O00471 708 aa31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 AMER1Q5JTC6 1135 aaPredicted RBP31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 FAM182BQ5T319 152 aa31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 POLKQ9UBT6 870 aa31.93■■■□□ 2.7
CTDSP2-203ENST00000547701 HSP90AB2PQ58FF8 381 aa31.92■■■□□ 2.7
CTDSP2-203ENST00000547701 SMG6Q86US8 1419 aaKnown RBP31.92■■■□□ 2.7
CTDSP2-203ENST00000547701 SBF2Q86WG5 1849 aa31.91■■■□□ 2.7
CTDSP2-203ENST00000547701 EMILIN1Q9Y6C2 1016 aa31.91■■■□□ 2.7
CTDSP2-203ENST00000547701 NPC1L1Q9UHC9 1359 aa31.91■■■□□ 2.7
CTDSP2-203ENST00000547701 RGPD2P0DJD1 1756 aa31.91■■■□□ 2.7
CTDSP2-203ENST00000547701 MARCH10Q8NA82 808 aaPredicted RBP31.89■■■□□ 2.7
CTDSP2-203ENST00000547701 BAG6P46379 1132 aa31.88■■■□□ 2.69
CTDSP2-203ENST00000547701 NCAPD2Q15021 1401 aa31.88■■■□□ 2.69
CTDSP2-203ENST00000547701 LTV1Q96GA3 475 aaPredicted RBP31.87■■■□□ 2.69
CTDSP2-203ENST00000547701 NBPF6Q5VWK0 638 aa31.86■■■□□ 2.69
CTDSP2-203ENST00000547701 NBPF4Q96M43 638 aa31.86■■■□□ 2.69
CTDSP2-203ENST00000547701 PARD3Q8TEW0 1356 aa31.83■■■□□ 2.69
CTDSP2-203ENST00000547701 TRIM37O94972 964 aa31.83■■■□□ 2.69
CTDSP2-203ENST00000547701 DEFB132Q7Z7B7 95 aa31.83■■■□□ 2.69
CTDSP2-203ENST00000547701 MORC1Q86VD1 984 aa31.82■■■□□ 2.68
CTDSP2-203ENST00000547701 PLEKHG2Q9H7P9 1386 aa31.8■■■□□ 2.68
CTDSP2-203ENST00000547701 BCL11BQ9C0K0 894 aaPredicted RBP31.78■■■□□ 2.68
CTDSP2-203ENST00000547701 RGPD3A6NKT7 1758 aaPredicted RBP31.78■■■□□ 2.68
CTDSP2-203ENST00000547701 RGPD4Q7Z3J3 1758 aa31.78■■■□□ 2.68
CTDSP2-203ENST00000547701 CAMKK2Q96RR4 588 aa31.77■■■□□ 2.68
CTDSP2-203ENST00000547701 MEGF6O75095 1541 aa31.76■■■□□ 2.68
CTDSP2-203ENST00000547701 PLSCR1O15162 318 aa31.75■■■□□ 2.67
CTDSP2-203ENST00000547701 SHANK3Q9BYB0 1731 aa31.75■■■□□ 2.67
CTDSP2-203ENST00000547701 PPM1GO15355 546 aaPredicted RBP31.74■■■□□ 2.67
CTDSP2-203ENST00000547701 APBA3O96018 575 aa31.73■■■□□ 2.67
CTDSP2-203ENST00000547701 TNNT2P45379 298 aaPredicted RBP31.73■■■□□ 2.67
CTDSP2-203ENST00000547701 EN1Q05925 392 aaPredicted RBP31.73■■■□□ 2.67
CTDSP2-203ENST00000547701 ZCRB1Q8TBF4 217 aaKnown RBP31.73■■■□□ 2.67
CTDSP2-203ENST00000547701 RAPGEF4Q8WZA2 1011 aa31.72■■■□□ 2.67
CTDSP2-203ENST00000547701 NHSQ6T4R5 1651 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms