RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 CARD10Q9BWT7 1032 aa28.57■■■□□ 2.16
SCN8A-204ENST00000546961 OVOS2A0A0G2JMS6 1433 aa28.57■■■□□ 2.16
SCN8A-204ENST00000546961 OVOS2A0A0J9YW53 1432 aa28.57■■■□□ 2.16
SCN8A-204ENST00000546961 OVOS2Q6IE36 1432 aa28.57■■■□□ 2.16
SCN8A-204ENST00000546961 PIK3C2AO00443 1686 aa28.57■■■□□ 2.16
SCN8A-204ENST00000546961 CPSF1Q10570 1443 aaKnown RBP28.56■■■□□ 2.16
SCN8A-204ENST00000546961 PTF1AQ7RTS3 328 aa28.56■■■□□ 2.16
SCN8A-204ENST00000546961 TMC1Q8TDI8 760 aa28.56■■■□□ 2.16
SCN8A-204ENST00000546961 PARP4Q9UKK3 1724 aaKnown RBP28.55■■■□□ 2.16
SCN8A-204ENST00000546961 BCL11BQ9C0K0 894 aaPredicted RBP28.55■■■□□ 2.16
SCN8A-204ENST00000546961 PLSCR1O15162 318 aa28.54■■■□□ 2.16
SCN8A-204ENST00000546961 COL18A1P39060 1754 aa28.53■■■□□ 2.16
SCN8A-204ENST00000546961 EXOC5O00471 708 aa28.53■■■□□ 2.16
SCN8A-204ENST00000546961 NME9Q86XW9 330 aa28.5■■■□□ 2.15
SCN8A-204ENST00000546961 SLC12A5Q9H2X9 1139 aa28.5■■■□□ 2.15
SCN8A-204ENST00000546961 SPON1Q9HCB6 807 aa28.49■■■□□ 2.15
SCN8A-204ENST00000546961 HDGFL2Q7Z4V5 671 aaPredicted RBP28.48■■■□□ 2.15
SCN8A-204ENST00000546961 KCNQ2O43526 872 aa28.47■■■□□ 2.15
SCN8A-204ENST00000546961 PPP1R1BQ9UD71 204 aaPredicted RBP28.47■■■□□ 2.15
SCN8A-204ENST00000546961 RREB1Q92766 1687 aa28.47■■■□□ 2.15
SCN8A-204ENST00000546961 PROM2Q8N271 834 aa28.46■■■□□ 2.15
SCN8A-204ENST00000546961 AKAP12Q02952 1782 aa28.46■■■□□ 2.15
SCN8A-204ENST00000546961 SBNO2Q9Y2G9 1366 aa28.46■■■□□ 2.15
SCN8A-204ENST00000546961 NUP188Q5SRE5 1749 aa28.46■■■□□ 2.15
SCN8A-204ENST00000546961 NLRP2Q9NX02 1062 aa28.45■■■□□ 2.14
SCN8A-204ENST00000546961 PEAK1Q9H792 1746 aa28.45■■■□□ 2.14
SCN8A-204ENST00000546961 USP31Q70CQ4 1352 aa28.45■■■□□ 2.14
SCN8A-204ENST00000546961 LRRC37A3O60309 1634 aa28.44■■■□□ 2.14
SCN8A-204ENST00000546961 TONSLQ96HA7 1378 aa28.43■■■□□ 2.14
SCN8A-204ENST00000546961 CCDC7Q96M83 1385 aa28.43■■■□□ 2.14
SCN8A-204ENST00000546961 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
SCN8A-204ENST00000546961 NFAT5O94916 1531 aa28.43■■■□□ 2.14
SCN8A-204ENST00000546961 RGPD5Q99666 1765 aa28.42■■■□□ 2.14
SCN8A-204ENST00000546961 TERF2IPQ9NYB0 399 aa28.42■■■□□ 2.14
SCN8A-204ENST00000546961 BCL9O00512 1426 aa28.4■■■□□ 2.14
SCN8A-204ENST00000546961 CD163L1Q9NR16 1453 aa28.39■■■□□ 2.13
SCN8A-204ENST00000546961 SBF2Q86WG5 1849 aa28.39■■■□□ 2.13
SCN8A-204ENST00000546961 TXNRD1Q16881 649 aa28.38■■■□□ 2.13
SCN8A-204ENST00000546961 ANKRD24Q8TF21 1146 aa28.38■■■□□ 2.13
SCN8A-204ENST00000546961 PDGFDQ9GZP0 370 aaPredicted RBP28.37■■■□□ 2.13
SCN8A-204ENST00000546961 ERBB3P21860 1342 aa28.37■■■□□ 2.13
SCN8A-204ENST00000546961 IL2RBP14784 551 aa28.36■■■□□ 2.13
SCN8A-204ENST00000546961 ACSBG1Q96GR2 724 aa28.36■■■□□ 2.13
SCN8A-204ENST00000546961 PUS7Q96PZ0 661 aaKnown RBP28.36■■■□□ 2.13
SCN8A-204ENST00000546961 STK32BQ9NY57 414 aa28.35■■■□□ 2.13
SCN8A-204ENST00000546961 MON2Q7Z3U7 1717 aa28.33■■■□□ 2.13
SCN8A-204ENST00000546961 ZBTB7AO95365 584 aa28.33■■■□□ 2.13
SCN8A-204ENST00000546961 EDC4Q6P2E9 1401 aaKnown RBP28.33■■■□□ 2.13
SCN8A-204ENST00000546961 ST20-MTHFSA0A0A6YYL1 179 aa28.32■■■□□ 2.12
SCN8A-204ENST00000546961 DCAF8L1A6NGE4 600 aa28.31■■■□□ 2.12
SCN8A-204ENST00000546961 LTV1Q96GA3 475 aaPredicted RBP28.31■■■□□ 2.12
SCN8A-204ENST00000546961 A0A1W2PP64 1363 aa28.31■■■□□ 2.12
SCN8A-204ENST00000546961 WNK3Q9BYP7 1800 aa28.3■■■□□ 2.12
SCN8A-204ENST00000546961 ABCC6O95255 1503 aa28.3■■■□□ 2.12
SCN8A-204ENST00000546961 SLC15A2Q16348 729 aa28.3■■■□□ 2.12
SCN8A-204ENST00000546961 ATF5Q9Y2D1 282 aaPredicted RBP28.3■■■□□ 2.12
SCN8A-204ENST00000546961 TNS2Q63HR2 1409 aa28.29■■■□□ 2.12
SCN8A-204ENST00000546961 IP6K1Q92551 441 aa28.29■■■□□ 2.12
SCN8A-204ENST00000546961 TESK2Q96S53 571 aa28.29■■■□□ 2.12
SCN8A-204ENST00000546961 RGPD3A6NKT7 1758 aaPredicted RBP28.27■■■□□ 2.12
SCN8A-204ENST00000546961 RGPD4Q7Z3J3 1758 aa28.27■■■□□ 2.12
SCN8A-204ENST00000546961 YY1P25490 414 aa28.27■■■□□ 2.12
SCN8A-204ENST00000546961 NINLQ9Y2I6 1382 aa28.25■■■□□ 2.11
SCN8A-204ENST00000546961 DDX54Q8TDD1 881 aaKnown RBP28.25■■■□□ 2.11
SCN8A-204ENST00000546961 COG3Q96JB2 828 aa28.25■■■□□ 2.11
SCN8A-204ENST00000546961 SLC24A1O60721 1099 aa28.24■■■□□ 2.11
SCN8A-204ENST00000546961 FBLN1P23142 703 aa28.24■■■□□ 2.11
SCN8A-204ENST00000546961 KAT6BQ8WYB5 2073 aa28.22■■■□□ 2.11
SCN8A-204ENST00000546961 PTGER2P43116 358 aa28.22■■■□□ 2.11
SCN8A-204ENST00000546961 AMPHP49418 695 aa28.22■■■□□ 2.11
SCN8A-204ENST00000546961 USP54Q70EL1 1684 aa28.2■■■□□ 2.11
SCN8A-204ENST00000546961 LTN1O94822 1766 aa28.2■■■□□ 2.11
SCN8A-204ENST00000546961 MAP3K19Q56UN5 1328 aa28.19■■■□□ 2.1
SCN8A-204ENST00000546961 HOXC9P31274 260 aa28.17■■■□□ 2.1
SCN8A-204ENST00000546961 MTFR1LQ9H019 292 aa28.17■■■□□ 2.1
SCN8A-204ENST00000546961 CASZ1Q86V15 1759 aa28.16■■■□□ 2.1
SCN8A-204ENST00000546961 LRRC4BQ9NT99 713 aa28.15■■■□□ 2.1
SCN8A-204ENST00000546961 TMF1P82094 1093 aa28.13■■■□□ 2.09
SCN8A-204ENST00000546961 SYTL4Q96C24 671 aaPredicted RBP28.13■■■□□ 2.09
SCN8A-204ENST00000546961 NHSQ6T4R5 1651 aa28.13■■■□□ 2.09
SCN8A-204ENST00000546961 FYB1O15117 783 aa28.12■■■□□ 2.09
SCN8A-204ENST00000546961 PRIM1P49642 420 aaKnown RBP28.12■■■□□ 2.09
SCN8A-204ENST00000546961 SYT17Q9BSW7 474 aa28.12■■■□□ 2.09
SCN8A-204ENST00000546961 FHDC1Q9C0D6 1143 aaPredicted RBP28.12■■■□□ 2.09
SCN8A-204ENST00000546961 GGNBP2Q9H3C7 697 aa28.12■■■□□ 2.09
SCN8A-204ENST00000546961 TRIM26Q12899 539 aaPredicted RBP28.11■■■□□ 2.09
SCN8A-204ENST00000546961 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
SCN8A-204ENST00000546961 ZNF827Q17R98 1081 aa28.11■■■□□ 2.09
SCN8A-204ENST00000546961 ZCRB1Q8TBF4 217 aaKnown RBP28.11■■■□□ 2.09
SCN8A-204ENST00000546961 ANKRD36BQ8N2N9 1353 aa28.1■■■□□ 2.09
SCN8A-204ENST00000546961 SGIP1Q9BQI5 828 aa28.09■■■□□ 2.09
SCN8A-204ENST00000546961 SLC27A3Q5K4L6 730 aa28.08■■■□□ 2.09
SCN8A-204ENST00000546961 KCNQ4P56696 695 aa28.07■■■□□ 2.08
SCN8A-204ENST00000546961 NBPF6Q5VWK0 638 aa28.07■■■□□ 2.08
SCN8A-204ENST00000546961 NBPF4Q96M43 638 aa28.07■■■□□ 2.08
SCN8A-204ENST00000546961 ARXQ96QS3 562 aa28.07■■■□□ 2.08
SCN8A-204ENST00000546961 AKT1S1Q96B36 256 aa28.06■■■□□ 2.08
SCN8A-204ENST00000546961 BTAF1O14981 1849 aa28.06■■■□□ 2.08
SCN8A-204ENST00000546961 USHBP1Q8N6Y0 703 aa28.05■■■□□ 2.08
SCN8A-204ENST00000546961 USP47Q96K76 1375 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms