RNA–Protein interactions for RNA: ENST00000546626.1

PRPF40B-205, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-205ENST00000546626 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
PRPF40B-205ENST00000546626 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
PRPF40B-205ENST00000546626 TESK2Q96S53 571 aa19.3■□□□□ 0.68
PRPF40B-205ENST00000546626 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
PRPF40B-205ENST00000546626 CARD10Q9BWT7 1032 aa19.29■□□□□ 0.68
PRPF40B-205ENST00000546626 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 APBA3O96018 575 aa19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 DDB1Q16531 1140 aa19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 NME9Q86XW9 330 aa19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 AKAP12Q02952 1782 aa19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
PRPF40B-205ENST00000546626 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
PRPF40B-205ENST00000546626 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
PRPF40B-205ENST00000546626 RGPD1P0DJD0 1748 aa19.26■□□□□ 0.67
PRPF40B-205ENST00000546626 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
PRPF40B-205ENST00000546626 A0A1W2PP64 1363 aa19.25■□□□□ 0.67
PRPF40B-205ENST00000546626 TMF1P82094 1093 aa19.25■□□□□ 0.67
PRPF40B-205ENST00000546626 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-205ENST00000546626 NFAT5O94916 1531 aa19.24■□□□□ 0.67
PRPF40B-205ENST00000546626 ABCC6O95255 1503 aa19.24■□□□□ 0.67
PRPF40B-205ENST00000546626 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
PRPF40B-205ENST00000546626 CDCA8Q53HL2 280 aa19.23■□□□□ 0.67
PRPF40B-205ENST00000546626 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 USP47Q96K76 1375 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 COL18A1P39060 1754 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 OVOS2A0A0G2JMS6 1433 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 OVOS2A0A0J9YW53 1432 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 OVOS2Q6IE36 1432 aa19.22■□□□□ 0.67
PRPF40B-205ENST00000546626 PSDA5PKW4 1024 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-205ENST00000546626 EXOC5O00471 708 aa19.21■□□□□ 0.67
PRPF40B-205ENST00000546626 COG3Q96JB2 828 aa19.2■□□□□ 0.66
PRPF40B-205ENST00000546626 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
PRPF40B-205ENST00000546626 PARP4Q9UKK3 1724 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-205ENST00000546626 NBPF14Q5TI25 921 aa19.19■□□□□ 0.66
PRPF40B-205ENST00000546626 ERBB3P21860 1342 aa19.19■□□□□ 0.66
PRPF40B-205ENST00000546626 R3HDM1Q15032 1099 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-205ENST00000546626 BCL11BQ9C0K0 894 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-205ENST00000546626 NLRP2Q9NX02 1062 aa19.18■□□□□ 0.66
PRPF40B-205ENST00000546626 ANKRD36BQ8N2N9 1353 aa19.18■□□□□ 0.66
PRPF40B-205ENST00000546626 BCL9O00512 1426 aa19.17■□□□□ 0.66
PRPF40B-205ENST00000546626 MARCH10Q8NA82 808 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-205ENST00000546626 ANKRD24Q8TF21 1146 aa19.17■□□□□ 0.66
PRPF40B-205ENST00000546626 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-205ENST00000546626 PLSCR1O15162 318 aa19.16■□□□□ 0.66
PRPF40B-205ENST00000546626 IP6K1Q92551 441 aa19.16■□□□□ 0.66
PRPF40B-205ENST00000546626 USP54Q70EL1 1684 aa19.16■□□□□ 0.66
PRPF40B-205ENST00000546626 IL2RBP14784 551 aa19.14■□□□□ 0.65
PRPF40B-205ENST00000546626 LRRC37A3O60309 1634 aa19.12■□□□□ 0.65
PRPF40B-205ENST00000546626 AMPHP49418 695 aa19.12■□□□□ 0.65
PRPF40B-205ENST00000546626 TNS2Q63HR2 1409 aa19.1■□□□□ 0.65
PRPF40B-205ENST00000546626 FYB1O15117 783 aa19.1■□□□□ 0.65
PRPF40B-205ENST00000546626 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
PRPF40B-205ENST00000546626 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
PRPF40B-205ENST00000546626 HOXC9P31274 260 aa19.09■□□□□ 0.65
PRPF40B-205ENST00000546626 LTV1Q96GA3 475 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-205ENST00000546626 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
PRPF40B-205ENST00000546626 LRP5O75197 1615 aa19.07■□□□□ 0.64
PRPF40B-205ENST00000546626 GGNBP2Q9H3C7 697 aa19.07■□□□□ 0.64
PRPF40B-205ENST00000546626 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-205ENST00000546626 RTL1A6NKG5 1358 aa19.06■□□□□ 0.64
PRPF40B-205ENST00000546626 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
PRPF40B-205ENST00000546626 FBLN1P23142 703 aa19.04■□□□□ 0.64
PRPF40B-205ENST00000546626 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
PRPF40B-205ENST00000546626 LTN1O94822 1766 aa19.04■□□□□ 0.64
PRPF40B-205ENST00000546626 RRS1Q15050 365 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-205ENST00000546626 RREB1Q92766 1687 aa19.03■□□□□ 0.64
PRPF40B-205ENST00000546626 KCNQ2O43526 872 aa19.02■□□□□ 0.64
PRPF40B-205ENST00000546626 PROM2Q8N271 834 aa19.02■□□□□ 0.64
PRPF40B-205ENST00000546626 EIF4G2P78344 907 aaKnown RBP eCLIP19.01■□□□□ 0.63
PRPF40B-205ENST00000546626 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
PRPF40B-205ENST00000546626 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
PRPF40B-205ENST00000546626 CARD14Q9BXL6 1004 aa19.01■□□□□ 0.63
PRPF40B-205ENST00000546626 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
PRPF40B-205ENST00000546626 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
PRPF40B-205ENST00000546626 SPON1Q9HCB6 807 aa19■□□□□ 0.63
PRPF40B-205ENST00000546626 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
PRPF40B-205ENST00000546626 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 STK32BQ9NY57 414 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
PRPF40B-205ENST00000546626 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-205ENST00000546626 INSRP06213 1382 aa18.97■□□□□ 0.63
PRPF40B-205ENST00000546626 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
PRPF40B-205ENST00000546626 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
PRPF40B-205ENST00000546626 ANO8Q9HCE9 1232 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-205ENST00000546626 FLT4P35916 1363 aa18.96■□□□□ 0.63
PRPF40B-205ENST00000546626 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-205ENST00000546626 RAPGEF4Q8WZA2 1011 aa18.96■□□□□ 0.63
PRPF40B-205ENST00000546626 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
PRPF40B-205ENST00000546626 SLC15A2Q16348 729 aa18.95■□□□□ 0.62
PRPF40B-205ENST00000546626 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
PRPF40B-205ENST00000546626 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
PRPF40B-205ENST00000546626 HSPA5P11021 654 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-205ENST00000546626 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-205ENST00000546626 SLC27A3Q5K4L6 730 aa18.92■□□□□ 0.62
PRPF40B-205ENST00000546626 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
PRPF40B-205ENST00000546626 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms