RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 OVOS2A0A0J9YW53 1432 aa18.14■□□□□ 0.49
LINC00661-201ENST00000546512 OVOS2Q6IE36 1432 aa18.14■□□□□ 0.49
LINC00661-201ENST00000546512 TCP11L2Q8N4U5 519 aa18.13■□□□□ 0.49
LINC00661-201ENST00000546512 CRB1P82279 1406 aa18.13■□□□□ 0.49
LINC00661-201ENST00000546512 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
LINC00661-201ENST00000546512 BARGINQ6ZT62 677 aa18.12■□□□□ 0.49
LINC00661-201ENST00000546512 CCDC125Q86Z20 511 aa18.12■□□□□ 0.49
LINC00661-201ENST00000546512 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
LINC00661-201ENST00000546512 ABCC6O95255 1503 aa18.1■□□□□ 0.49
LINC00661-201ENST00000546512 BLMP54132 1417 aaPredicted RBP18.1■□□□□ 0.49
LINC00661-201ENST00000546512 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
LINC00661-201ENST00000546512 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
LINC00661-201ENST00000546512 COG3Q96JB2 828 aa18.1■□□□□ 0.49
LINC00661-201ENST00000546512 MYOM1P52179 1685 aa18.09■□□□□ 0.49
LINC00661-201ENST00000546512 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
LINC00661-201ENST00000546512 FAM182BQ5T319 152 aa18.08■□□□□ 0.48
LINC00661-201ENST00000546512 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
LINC00661-201ENST00000546512 RGPD5Q99666 1765 aa18.08■□□□□ 0.48
LINC00661-201ENST00000546512 LTN1O94822 1766 aa18.07■□□□□ 0.48
LINC00661-201ENST00000546512 SF3B2Q13435 895 aaKnown RBP18.06■□□□□ 0.48
LINC00661-201ENST00000546512 GGNBP2Q9H3C7 697 aa18.06■□□□□ 0.48
LINC00661-201ENST00000546512 FYB1O15117 783 aa18.05■□□□□ 0.48
LINC00661-201ENST00000546512 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
LINC00661-201ENST00000546512 CARD10Q9BWT7 1032 aa18.04■□□□□ 0.48
LINC00661-201ENST00000546512 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
LINC00661-201ENST00000546512 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
LINC00661-201ENST00000546512 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
LINC00661-201ENST00000546512 ERBB3P21860 1342 aa18.03■□□□□ 0.48
LINC00661-201ENST00000546512 KIF20BQ96Q89 1820 aa18.02■□□□□ 0.48
LINC00661-201ENST00000546512 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
LINC00661-201ENST00000546512 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.48
LINC00661-201ENST00000546512 CCDC7Q96M83 1385 aa18.02■□□□□ 0.47
LINC00661-201ENST00000546512 MAP3K19Q56UN5 1328 aa18.01■□□□□ 0.47
LINC00661-201ENST00000546512 FBLN1P23142 703 aa18.01■□□□□ 0.47
LINC00661-201ENST00000546512 FAM196AQ6ZSG2 479 aa18.01■□□□□ 0.47
LINC00661-201ENST00000546512 IP6K1Q92551 441 aa18.01■□□□□ 0.47
LINC00661-201ENST00000546512 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
LINC00661-201ENST00000546512 DDB1Q16531 1140 aa18■□□□□ 0.47
LINC00661-201ENST00000546512 CDCA7Q9BWT1 371 aaPredicted RBP18■□□□□ 0.47
LINC00661-201ENST00000546512 NLRP2Q9NX02 1062 aa18■□□□□ 0.47
LINC00661-201ENST00000546512 LRRC37A3O60309 1634 aa18■□□□□ 0.47
LINC00661-201ENST00000546512 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
LINC00661-201ENST00000546512 AMPHP49418 695 aa17.99■□□□□ 0.47
LINC00661-201ENST00000546512 HOXC9P31274 260 aa17.98■□□□□ 0.47
LINC00661-201ENST00000546512 BAG6P46379 1132 aa17.98■□□□□ 0.47
LINC00661-201ENST00000546512 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
LINC00661-201ENST00000546512 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
LINC00661-201ENST00000546512 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
LINC00661-201ENST00000546512 C11orf95C9JLR9 678 aaPredicted RBP17.97■□□□□ 0.47
LINC00661-201ENST00000546512 TRIM37O94972 964 aa17.97■□□□□ 0.47
LINC00661-201ENST00000546512 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
LINC00661-201ENST00000546512 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
LINC00661-201ENST00000546512 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
LINC00661-201ENST00000546512 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
LINC00661-201ENST00000546512 EXOC5O00471 708 aa17.94■□□□□ 0.46
LINC00661-201ENST00000546512 PANK3Q9H999 370 aa17.94■□□□□ 0.46
LINC00661-201ENST00000546512 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
LINC00661-201ENST00000546512 IL2RBP14784 551 aa17.93■□□□□ 0.46
LINC00661-201ENST00000546512 EN1Q05925 392 aaPredicted RBP17.93■□□□□ 0.46
LINC00661-201ENST00000546512 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
LINC00661-201ENST00000546512 TNS2Q63HR2 1409 aa17.92■□□□□ 0.46
LINC00661-201ENST00000546512 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
LINC00661-201ENST00000546512 APBA3O96018 575 aa17.91■□□□□ 0.46
LINC00661-201ENST00000546512 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
LINC00661-201ENST00000546512 FLT4P35916 1363 aa17.91■□□□□ 0.46
LINC00661-201ENST00000546512 SMG6Q86US8 1419 aaKnown RBP17.9■□□□□ 0.46
LINC00661-201ENST00000546512 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
LINC00661-201ENST00000546512 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
LINC00661-201ENST00000546512 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
LINC00661-201ENST00000546512 INSRP06213 1382 aa17.89■□□□□ 0.45
LINC00661-201ENST00000546512 EZH2Q15910 746 aaKnown RBP17.88■□□□□ 0.45
LINC00661-201ENST00000546512 ANKRD26Q9UPS8 1709 aa17.88■□□□□ 0.45
LINC00661-201ENST00000546512 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
LINC00661-201ENST00000546512 BCL9O00512 1426 aa17.87■□□□□ 0.45
LINC00661-201ENST00000546512 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
LINC00661-201ENST00000546512 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 NSD2O96028 1365 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 SBF2Q86WG5 1849 aa17.86■□□□□ 0.45
LINC00661-201ENST00000546512 USHBP1Q8N6Y0 703 aa17.85■□□□□ 0.45
LINC00661-201ENST00000546512 PARD3Q8TEW0 1356 aa17.85■□□□□ 0.45
LINC00661-201ENST00000546512 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
LINC00661-201ENST00000546512 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
LINC00661-201ENST00000546512 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.44
LINC00661-201ENST00000546512 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
LINC00661-201ENST00000546512 MEGF6O75095 1541 aa17.82■□□□□ 0.44
LINC00661-201ENST00000546512 MAP2P11137 1827 aaKnown RBP17.82■□□□□ 0.44
LINC00661-201ENST00000546512 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
LINC00661-201ENST00000546512 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
LINC00661-201ENST00000546512 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
LINC00661-201ENST00000546512 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
LINC00661-201ENST00000546512 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
LINC00661-201ENST00000546512 RREB1Q92766 1687 aa17.8■□□□□ 0.44
LINC00661-201ENST00000546512 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
LINC00661-201ENST00000546512 PLSCR1O15162 318 aa17.79■□□□□ 0.44
LINC00661-201ENST00000546512 KCNQ2O43526 872 aa17.79■□□□□ 0.44
LINC00661-201ENST00000546512 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
LINC00661-201ENST00000546512 ZCRB1Q8TBF4 217 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms