RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PARD3Q8TEW0 1356 aa26.59■■□□□ 1.85
CHPT1-202ENST00000546490 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
CHPT1-202ENST00000546490 CD163L1Q9NR16 1453 aa26.58■■□□□ 1.85
CHPT1-202ENST00000546490 WDR17Q8IZU2 1322 aa26.57■■□□□ 1.84
CHPT1-202ENST00000546490 OVOS2A0A0G2JMS6 1433 aa26.56■■□□□ 1.84
CHPT1-202ENST00000546490 OVOS2A0A0J9YW53 1432 aa26.56■■□□□ 1.84
CHPT1-202ENST00000546490 OVOS2Q6IE36 1432 aa26.56■■□□□ 1.84
CHPT1-202ENST00000546490 RGPD3A6NKT7 1758 aaPredicted RBP26.56■■□□□ 1.84
CHPT1-202ENST00000546490 RGPD4Q7Z3J3 1758 aa26.56■■□□□ 1.84
CHPT1-202ENST00000546490 PSDA5PKW4 1024 aaPredicted RBP26.56■■□□□ 1.84
CHPT1-202ENST00000546490 TOM1L2Q6ZVM7 507 aa26.56■■□□□ 1.84
CHPT1-202ENST00000546490 SOX12O15370 315 aa26.55■■□□□ 1.84
CHPT1-202ENST00000546490 ARHGEF25Q86VW2 580 aa26.55■■□□□ 1.84
CHPT1-202ENST00000546490 EZH2Q15910 746 aaKnown RBP26.54■■□□□ 1.84
CHPT1-202ENST00000546490 C11orf95C9JLR9 678 aaPredicted RBP26.53■■□□□ 1.84
CHPT1-202ENST00000546490 APBA3O96018 575 aa26.53■■□□□ 1.84
CHPT1-202ENST00000546490 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
CHPT1-202ENST00000546490 EDC4Q6P2E9 1401 aaKnown RBP26.52■■□□□ 1.84
CHPT1-202ENST00000546490 USP31Q70CQ4 1352 aa26.52■■□□□ 1.84
CHPT1-202ENST00000546490 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
CHPT1-202ENST00000546490 AXIN2Q9Y2T1 843 aa26.52■■□□□ 1.84
CHPT1-202ENST00000546490 HDGFL2Q7Z4V5 671 aaPredicted RBP26.51■■□□□ 1.83
CHPT1-202ENST00000546490 CAMKK2Q96RR4 588 aa26.51■■□□□ 1.83
CHPT1-202ENST00000546490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.5■■□□□ 1.83
CHPT1-202ENST00000546490 DDB1Q16531 1140 aa26.49■■□□□ 1.83
CHPT1-202ENST00000546490 A0A1W2PP64 1363 aa26.48■■□□□ 1.83
CHPT1-202ENST00000546490 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
CHPT1-202ENST00000546490 R3HDM1Q15032 1099 aaKnown RBP26.48■■□□□ 1.83
CHPT1-202ENST00000546490 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
CHPT1-202ENST00000546490 PUS7Q96PZ0 661 aaKnown RBP26.47■■□□□ 1.83
CHPT1-202ENST00000546490 TERF2IPQ9NYB0 399 aa26.47■■□□□ 1.83
CHPT1-202ENST00000546490 NINLQ9Y2I6 1382 aa26.46■■□□□ 1.83
CHPT1-202ENST00000546490 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
CHPT1-202ENST00000546490 NME9Q86XW9 330 aa26.45■■□□□ 1.82
CHPT1-202ENST00000546490 CARD10Q9BWT7 1032 aa26.45■■□□□ 1.82
CHPT1-202ENST00000546490 SLC12A5Q9H2X9 1139 aa26.45■■□□□ 1.82
CHPT1-202ENST00000546490 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
CHPT1-202ENST00000546490 TNS2Q63HR2 1409 aa26.41■■□□□ 1.82
CHPT1-202ENST00000546490 SLC24A1O60721 1099 aa26.41■■□□□ 1.82
CHPT1-202ENST00000546490 TESK2Q96S53 571 aa26.41■■□□□ 1.82
CHPT1-202ENST00000546490 BCL9O00512 1426 aa26.4■■□□□ 1.82
CHPT1-202ENST00000546490 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
CHPT1-202ENST00000546490 ERBB3P21860 1342 aa26.39■■□□□ 1.82
CHPT1-202ENST00000546490 NBPF14Q5TI25 921 aa26.38■■□□□ 1.81
CHPT1-202ENST00000546490 NHSQ6T4R5 1651 aa26.38■■□□□ 1.81
CHPT1-202ENST00000546490 MARCH10Q8NA82 808 aaPredicted RBP26.36■■□□□ 1.81
CHPT1-202ENST00000546490 USP47Q96K76 1375 aa26.35■■□□□ 1.81
CHPT1-202ENST00000546490 BCL11BQ9C0K0 894 aaPredicted RBP26.34■■□□□ 1.81
CHPT1-202ENST00000546490 KIF20BQ96Q89 1820 aa26.34■■□□□ 1.81
CHPT1-202ENST00000546490 EXOC5O00471 708 aa26.33■■□□□ 1.81
CHPT1-202ENST00000546490 ANKRD36BQ8N2N9 1353 aa26.33■■□□□ 1.8
CHPT1-202ENST00000546490 PLSCR1O15162 318 aa26.32■■□□□ 1.8
CHPT1-202ENST00000546490 NLRP2Q9NX02 1062 aa26.32■■□□□ 1.8
CHPT1-202ENST00000546490 ANKRD24Q8TF21 1146 aa26.31■■□□□ 1.8
CHPT1-202ENST00000546490 MYOM1P52179 1685 aa26.28■■□□□ 1.8
CHPT1-202ENST00000546490 CASZ1Q86V15 1759 aa26.28■■□□□ 1.8
CHPT1-202ENST00000546490 TMF1P82094 1093 aa26.28■■□□□ 1.8
CHPT1-202ENST00000546490 COG3Q96JB2 828 aa26.28■■□□□ 1.8
CHPT1-202ENST00000546490 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
CHPT1-202ENST00000546490 IL2RBP14784 551 aa26.27■■□□□ 1.8
CHPT1-202ENST00000546490 BTAF1O14981 1849 aa26.27■■□□□ 1.8
CHPT1-202ENST00000546490 PTF1AQ7RTS3 328 aa26.26■■□□□ 1.79
CHPT1-202ENST00000546490 KAT6BQ8WYB5 2073 aa26.24■■□□□ 1.79
CHPT1-202ENST00000546490 IP6K1Q92551 441 aa26.24■■□□□ 1.79
CHPT1-202ENST00000546490 RTL1A6NKG5 1358 aa26.21■■□□□ 1.79
CHPT1-202ENST00000546490 MAP3K19Q56UN5 1328 aa26.21■■□□□ 1.79
CHPT1-202ENST00000546490 CDCA8Q53HL2 280 aa26.21■■□□□ 1.79
CHPT1-202ENST00000546490 SHANK3Q9BYB0 1731 aa26.2■■□□□ 1.79
CHPT1-202ENST00000546490 ANO8Q9HCE9 1232 aaPredicted RBP26.2■■□□□ 1.78
CHPT1-202ENST00000546490 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
CHPT1-202ENST00000546490 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
CHPT1-202ENST00000546490 DOT1LQ8TEK3 1739 aa26.19■■□□□ 1.78
CHPT1-202ENST00000546490 AMPHP49418 695 aa26.18■■□□□ 1.78
CHPT1-202ENST00000546490 LTV1Q96GA3 475 aaPredicted RBP26.18■■□□□ 1.78
CHPT1-202ENST00000546490 HOXC9P31274 260 aa26.17■■□□□ 1.78
CHPT1-202ENST00000546490 SPON1Q9HCB6 807 aa26.17■■□□□ 1.78
CHPT1-202ENST00000546490 PAPPAQ13219 1627 aa26.17■■□□□ 1.78
CHPT1-202ENST00000546490 TXNRD1Q16881 649 aa26.16■■□□□ 1.78
CHPT1-202ENST00000546490 ACSBG1Q96GR2 724 aa26.16■■□□□ 1.78
CHPT1-202ENST00000546490 KCNQ2O43526 872 aa26.15■■□□□ 1.78
CHPT1-202ENST00000546490 PROM2Q8N271 834 aa26.15■■□□□ 1.78
CHPT1-202ENST00000546490 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.78
CHPT1-202ENST00000546490 GGNBP2Q9H3C7 697 aa26.13■■□□□ 1.77
CHPT1-202ENST00000546490 PPP1R1BQ9UD71 204 aaPredicted RBP26.13■■□□□ 1.77
CHPT1-202ENST00000546490 FYB1O15117 783 aa26.12■■□□□ 1.77
CHPT1-202ENST00000546490 STK32BQ9NY57 414 aa26.12■■□□□ 1.77
CHPT1-202ENST00000546490 FBLN1P23142 703 aa26.11■■□□□ 1.77
CHPT1-202ENST00000546490 ANKRD26Q9UPS8 1709 aa26.11■■□□□ 1.77
CHPT1-202ENST00000546490 MEGF6O75095 1541 aa26.1■■□□□ 1.77
CHPT1-202ENST00000546490 RRS1Q15050 365 aaKnown RBP26.1■■□□□ 1.77
CHPT1-202ENST00000546490 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
CHPT1-202ENST00000546490 NSD3Q9BZ95 1437 aa26.09■■□□□ 1.77
CHPT1-202ENST00000546490 QSER1Q2KHR3 1735 aa26.08■■□□□ 1.77
CHPT1-202ENST00000546490 SLC15A2Q16348 729 aa26.07■■□□□ 1.76
CHPT1-202ENST00000546490 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
CHPT1-202ENST00000546490 LY75O60449 1722 aa26.07■■□□□ 1.76
CHPT1-202ENST00000546490 FLT4P35916 1363 aa26.07■■□□□ 1.76
CHPT1-202ENST00000546490 KIF24Q5T7B8 1368 aa26.07■■□□□ 1.76
CHPT1-202ENST00000546490 INSRP06213 1382 aa26.04■■□□□ 1.76
CHPT1-202ENST00000546490 MAP2P11137 1827 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms