RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
ATXN2-216ENST00000546483 MCM5P33992 734 aa15.15■□□□□ 0.02
ATXN2-216ENST00000546483 MTERF4Q7Z6M4 381 aaKnown RBP15.15■□□□□ 0.02
ATXN2-216ENST00000546483 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
ATXN2-216ENST00000546483 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
ATXN2-216ENST00000546483 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
ATXN2-216ENST00000546483 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
ATXN2-216ENST00000546483 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
ATXN2-216ENST00000546483 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
ATXN2-216ENST00000546483 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
ATXN2-216ENST00000546483 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 PLEKHF1Q96S99 279 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
ATXN2-216ENST00000546483 EXOSC9Q06265 439 aaKnown RBP15.13■□□□□ 0.01
ATXN2-216ENST00000546483 TMEM57Q8N5G2 664 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 PIK3R4Q99570 1358 aa15.13■□□□□ 0.01
ATXN2-216ENST00000546483 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
ATXN2-216ENST00000546483 CD2BP2O95400 341 aaKnown RBP15.12■□□□□ 0.01
ATXN2-216ENST00000546483 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
ATXN2-216ENST00000546483 PRDM4Q9UKN5 801 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 PPLO60437 1756 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 PPIP5K1Q6PFW1 1433 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 ANKRD36BQ8N2N9 1353 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 SSFA2P28290 1259 aa15.12■□□□□ 0.01
ATXN2-216ENST00000546483 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
ATXN2-216ENST00000546483 UBR1Q8IWV7 1749 aa15.11■□□□□ 0.01
ATXN2-216ENST00000546483 NUCB2P80303 420 aa15.11■□□□□ 0.01
ATXN2-216ENST00000546483 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
ATXN2-216ENST00000546483 DDX49Q9Y6V7 483 aaKnown RBP15.11■□□□□ 0.01
ATXN2-216ENST00000546483 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
ATXN2-216ENST00000546483 GAS2L2Q8NHY3 880 aa15.1■□□□□ 0.01
ATXN2-216ENST00000546483 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
ATXN2-216ENST00000546483 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
ATXN2-216ENST00000546483 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
ATXN2-216ENST00000546483 TSR2Q969E8 191 aaKnown RBP15.09■□□□□ 0.01
ATXN2-216ENST00000546483 LNPKQ9C0E8 428 aa15.09■□□□□ 0.01
ATXN2-216ENST00000546483 SLC12A5Q9H2X9 1139 aa15.09■□□□□ 0.01
ATXN2-216ENST00000546483 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
ATXN2-216ENST00000546483 CEP170BQ9Y4F5 1589 aaPredicted RBP15.09■□□□□ 0.01
ATXN2-216ENST00000546483 DYNC1I1O14576 645 aa15.08■□□□□ 0.01
ATXN2-216ENST00000546483 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0.01
ATXN2-216ENST00000546483 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0.01
ATXN2-216ENST00000546483 RABEP1Q15276 862 aa15.08■□□□□ 0.01
ATXN2-216ENST00000546483 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
ATXN2-216ENST00000546483 LMBRD1Q9NUN5 540 aa15.08■□□□□ 0
ATXN2-216ENST00000546483 ZNF142P52746 1687 aaPredicted RBP15.07■□□□□ 0
ATXN2-216ENST00000546483 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
ATXN2-216ENST00000546483 ZSCAN23Q3MJ62 389 aa15.07■□□□□ 0
ATXN2-216ENST00000546483 ZKSCAN5Q9Y2L8 839 aa15.07■□□□□ 0
ATXN2-216ENST00000546483 PTCH1Q13635 1447 aa15.07■□□□□ 0
ATXN2-216ENST00000546483 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
ATXN2-216ENST00000546483 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
ATXN2-216ENST00000546483 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
ATXN2-216ENST00000546483 RIMS2Q9UQ26 1411 aa15.06■□□□□ 0
ATXN2-216ENST00000546483 CDC42BPGQ6DT37 1551 aa15.06■□□□□ 0
ATXN2-216ENST00000546483 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
ATXN2-216ENST00000546483 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ 0
ATXN2-216ENST00000546483 CDC45O75419 566 aa15.05■□□□□ 0
ATXN2-216ENST00000546483 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ 0
ATXN2-216ENST00000546483 HDGFP51858 240 aaKnown RBP15.05■□□□□ 0
ATXN2-216ENST00000546483 TMEM2Q9UHN6 1383 aa15.05■□□□□ 0
ATXN2-216ENST00000546483 ZFYVE9O95405 1425 aa15.05■□□□□ 0
ATXN2-216ENST00000546483 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ -0
ATXN2-216ENST00000546483 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.05■□□□□ -0
ATXN2-216ENST00000546483 ANKRD26Q9UPS8 1709 aa15.05■□□□□ -0
ATXN2-216ENST00000546483 RBSNQ9H1K0 784 aa15.04■□□□□ -0
ATXN2-216ENST00000546483 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
ATXN2-216ENST00000546483 R3HCC1Q9Y3T6 440 aaKnown RBP15.04■□□□□ -0
ATXN2-216ENST00000546483 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
ATXN2-216ENST00000546483 PNPLA6Q8IY17 1366 aa15.02■□□□□ -0
ATXN2-216ENST00000546483 SLIT1O75093 1534 aa15.02■□□□□ -0
ATXN2-216ENST00000546483 KIF24Q5T7B8 1368 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 UQCRHLA0A096LP55 91 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 UQCRHP07919 91 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 ANKRD45Q5TZF3 282 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 SASS6Q6UVJ0 657 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 CCDC39Q9UFE4 941 aa15.02□□□□□ -0.01
ATXN2-216ENST00000546483 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
ATXN2-216ENST00000546483 LRSAM1Q6UWE0 723 aa15.01□□□□□ -0.01
ATXN2-216ENST00000546483 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
ATXN2-216ENST00000546483 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
ATXN2-216ENST00000546483 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
ATXN2-216ENST00000546483 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
ATXN2-216ENST00000546483 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
ATXN2-216ENST00000546483 EVC2Q86UK5 1308 aa15□□□□□ -0.01
ATXN2-216ENST00000546483 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
ATXN2-216ENST00000546483 FAM13BQ9NYF5 915 aa15□□□□□ -0.01
ATXN2-216ENST00000546483 ABCC4O15439 1325 aa14.99□□□□□ -0.01
ATXN2-216ENST00000546483 RBM10P98175 930 aaKnown RBP14.99□□□□□ -0.01
ATXN2-216ENST00000546483 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
ATXN2-216ENST00000546483 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
ATXN2-216ENST00000546483 USP26Q9BXU7 913 aa14.99□□□□□ -0.01
ATXN2-216ENST00000546483 SIRT2Q8IXJ6 389 aa14.98□□□□□ -0.01
ATXN2-216ENST00000546483 GPT2Q8TD30 523 aa14.98□□□□□ -0.01
ATXN2-216ENST00000546483 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
ATXN2-216ENST00000546483 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms