RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MEX3CQ5U5Q3 659 aaKnown RBP10.72□□□□□ -0.69
CCDC60-205ENST00000546345 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
CCDC60-205ENST00000546345 NRXN3Q9Y4C0 1643 aa10.71□□□□□ -0.69
CCDC60-205ENST00000546345 NOS1P29475 1434 aa10.7□□□□□ -0.7
CCDC60-205ENST00000546345 SETD5Q9C0A6 1442 aa10.7□□□□□ -0.7
CCDC60-205ENST00000546345 EID1Q9Y6B2 187 aa10.7□□□□□ -0.7
CCDC60-205ENST00000546345 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
CCDC60-205ENST00000546345 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
CCDC60-205ENST00000546345 HIC1Q14526 733 aa10.69□□□□□ -0.7
CCDC60-205ENST00000546345 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
CCDC60-205ENST00000546345 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
CCDC60-205ENST00000546345 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.69□□□□□ -0.7
CCDC60-205ENST00000546345 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
CCDC60-205ENST00000546345 UNC13BO14795 1591 aa10.69□□□□□ -0.7
CCDC60-205ENST00000546345 ATAD2Q6PL18 1390 aa10.68□□□□□ -0.7
CCDC60-205ENST00000546345 TRPM2O94759 1503 aa10.68□□□□□ -0.7
CCDC60-205ENST00000546345 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 SPHKAPQ2M3C7 1700 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 PLEKHG1Q9ULL1 1385 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 GNPATO15228 680 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 GPR37O15354 613 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 PRSS12P56730 875 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC60-205ENST00000546345 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
CCDC60-205ENST00000546345 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
CCDC60-205ENST00000546345 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
CCDC60-205ENST00000546345 DCCP43146 1447 aa10.66□□□□□ -0.7
CCDC60-205ENST00000546345 MST1RQ04912 1400 aa10.66□□□□□ -0.7
CCDC60-205ENST00000546345 NUTM2BA6NNL0 878 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-205ENST00000546345 NUTM2EB1AL46 878 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-205ENST00000546345 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 BRINP3Q76B58 766 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 NUTM2AQ8IVF1 878 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-205ENST00000546345 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
CCDC60-205ENST00000546345 RBM27Q9P2N5 1060 aaKnown RBP10.65□□□□□ -0.7
CCDC60-205ENST00000546345 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
CCDC60-205ENST00000546345 TK2O00142 265 aa10.64□□□□□ -0.71
CCDC60-205ENST00000546345 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
CCDC60-205ENST00000546345 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
CCDC60-205ENST00000546345 IDI1Q13907 227 aa10.64□□□□□ -0.71
CCDC60-205ENST00000546345 PROX2Q3B8N5 592 aa10.64□□□□□ -0.71
CCDC60-205ENST00000546345 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
CCDC60-205ENST00000546345 ZMYND10O75800 440 aa10.63□□□□□ -0.71
CCDC60-205ENST00000546345 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
CCDC60-205ENST00000546345 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
CCDC60-205ENST00000546345 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
CCDC60-205ENST00000546345 VPS9D1Q9Y2B5 631 aa10.63□□□□□ -0.71
CCDC60-205ENST00000546345 KIF15Q9NS87 1388 aa10.63□□□□□ -0.71
CCDC60-205ENST00000546345 BCL9LQ86UU0 1499 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 GLI3P10071 1580 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 ATRNO75882 1429 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 RIMS2Q9UQ26 1411 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 PACS2Q86VP3 889 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 KRI1Q8N9T8 703 aaKnown RBP10.62□□□□□ -0.71
CCDC60-205ENST00000546345 E9PCH4 1651 aa10.62□□□□□ -0.71
CCDC60-205ENST00000546345 FECHP22830 423 aa10.61□□□□□ -0.71
CCDC60-205ENST00000546345 C8orf37Q96NL8 207 aa10.61□□□□□ -0.71
CCDC60-205ENST00000546345 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
CCDC60-205ENST00000546345 IQGAP3Q86VI3 1631 aa10.61□□□□□ -0.71
CCDC60-205ENST00000546345 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
CCDC60-205ENST00000546345 TSPY4P0CV99 314 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 TSPY10P0CW01 314 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 QTRT2Q9H974 415 aaKnown RBP10.6□□□□□ -0.71
CCDC60-205ENST00000546345 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
CCDC60-205ENST00000546345 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
CCDC60-205ENST00000546345 RPRD2Q5VT52 1461 aaKnown RBP10.59□□□□□ -0.71
CCDC60-205ENST00000546345 PIK3R4Q99570 1358 aa10.58□□□□□ -0.72
CCDC60-205ENST00000546345 ABCC5O15440 1437 aa10.58□□□□□ -0.72
CCDC60-205ENST00000546345 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
CCDC60-205ENST00000546345 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
CCDC60-205ENST00000546345 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
CCDC60-205ENST00000546345 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
CCDC60-205ENST00000546345 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
CCDC60-205ENST00000546345 TNS1Q9HBL0 1735 aaKnown RBP10.57□□□□□ -0.72
CCDC60-205ENST00000546345 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
CCDC60-205ENST00000546345 MYOM2P54296 1465 aa10.56□□□□□ -0.72
CCDC60-205ENST00000546345 ABCA3Q99758 1704 aa10.56□□□□□ -0.72
CCDC60-205ENST00000546345 NBPF26B4DH59 902 aa10.56□□□□□ -0.72
CCDC60-205ENST00000546345 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
CCDC60-205ENST00000546345 ADGRL3Q9HAR2 1447 aa10.56□□□□□ -0.72
CCDC60-205ENST00000546345 IRF6O14896 467 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 TATDN2Q93075 761 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 NBPF3Q9H094 633 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 TBX22Q9Y458 520 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 DAPK1P53355 1430 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 BLMP54132 1417 aaPredicted RBP10.55□□□□□ -0.72
CCDC60-205ENST00000546345 PTCH1Q13635 1447 aa10.55□□□□□ -0.72
CCDC60-205ENST00000546345 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
CCDC60-205ENST00000546345 HRO43593 1189 aa10.54□□□□□ -0.72
CCDC60-205ENST00000546345 OATP04181 439 aa10.54□□□□□ -0.72
CCDC60-205ENST00000546345 ATF3P18847 181 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms