RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 ARXQ96QS3 562 aa26.25■■□□□ 1.79
C12orf43-209ENST00000546272 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
C12orf43-209ENST00000546272 AKAP12Q02952 1782 aa26.24■■□□□ 1.79
C12orf43-209ENST00000546272 GPR162Q16538 588 aa26.23■■□□□ 1.79
C12orf43-209ENST00000546272 TOPAZ1Q8N9V7 1692 aa26.23■■□□□ 1.79
C12orf43-209ENST00000546272 MARCH10Q8NA82 808 aaPredicted RBP26.21■■□□□ 1.79
C12orf43-209ENST00000546272 CDK19Q9BWU1 502 aa26.2■■□□□ 1.79
C12orf43-209ENST00000546272 CCDC61Q9Y6R9 512 aa26.2■■□□□ 1.79
C12orf43-209ENST00000546272 ARHGEF28Q8N1W1 1705 aaKnown RBP26.2■■□□□ 1.79
C12orf43-209ENST00000546272 WNK3Q9BYP7 1800 aa26.2■■□□□ 1.78
C12orf43-209ENST00000546272 AATKQ6ZMQ8 1374 aa26.2■■□□□ 1.78
C12orf43-209ENST00000546272 PLEKHG3A1L390 1219 aa26.19■■□□□ 1.78
C12orf43-209ENST00000546272 TOM1L2Q6ZVM7 507 aa26.18■■□□□ 1.78
C12orf43-209ENST00000546272 CDCA7Q9BWT1 371 aaPredicted RBP26.18■■□□□ 1.78
C12orf43-209ENST00000546272 ZBTB7CA1YPR0 619 aa26.15■■□□□ 1.78
C12orf43-209ENST00000546272 SHANK3Q9BYB0 1731 aa26.13■■□□□ 1.77
C12orf43-209ENST00000546272 KDM2AQ9Y2K7 1162 aa26.12■■□□□ 1.77
C12orf43-209ENST00000546272 WDR17Q8IZU2 1322 aa26.11■■□□□ 1.77
C12orf43-209ENST00000546272 COL18A1P39060 1754 aa26.09■■□□□ 1.77
C12orf43-209ENST00000546272 BRD4O60885 1362 aaPredicted RBP26.09■■□□□ 1.77
C12orf43-209ENST00000546272 DCAF11Q8TEB1 546 aa26.09■■□□□ 1.77
C12orf43-209ENST00000546272 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.77
C12orf43-209ENST00000546272 PAPPAQ13219 1627 aa26.08■■□□□ 1.77
C12orf43-209ENST00000546272 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
C12orf43-209ENST00000546272 STAC3Q96MF2 364 aa26.08■■□□□ 1.77
C12orf43-209ENST00000546272 GOLGB1Q14789 3259 aaKnown RBP26.07■■□□□ 1.76
C12orf43-209ENST00000546272 SLIT3O75094 1523 aa26.07■■□□□ 1.76
C12orf43-209ENST00000546272 EXOC5O00471 708 aa26.06■■□□□ 1.76
C12orf43-209ENST00000546272 NLRP6P59044 892 aa26.06■■□□□ 1.76
C12orf43-209ENST00000546272 NHSQ6T4R5 1651 aa26.05■■□□□ 1.76
C12orf43-209ENST00000546272 KLHL34Q8N239 644 aa26.05■■□□□ 1.76
C12orf43-209ENST00000546272 AXIN2Q9Y2T1 843 aa26.04■■□□□ 1.76
C12orf43-209ENST00000546272 SLC16A10Q8TF71 515 aa26.03■■□□□ 1.76
C12orf43-209ENST00000546272 CARD10Q9BWT7 1032 aa26.03■■□□□ 1.76
C12orf43-209ENST00000546272 PPIP5K1Q6PFW1 1433 aa26.03■■□□□ 1.76
C12orf43-209ENST00000546272 POLD1P28340 1107 aa26.02■■□□□ 1.76
C12orf43-209ENST00000546272 ZNF827Q17R98 1081 aa26■■□□□ 1.75
C12orf43-209ENST00000546272 RGPD5Q99666 1765 aa26■■□□□ 1.75
C12orf43-209ENST00000546272 COL24A1Q17RW2 1714 aa26■■□□□ 1.75
C12orf43-209ENST00000546272 CPSF1Q10570 1443 aaKnown RBP25.98■■□□□ 1.75
C12orf43-209ENST00000546272 TNS2Q63HR2 1409 aa25.98■■□□□ 1.75
C12orf43-209ENST00000546272 GRIN3BO60391 1043 aa25.98■■□□□ 1.75
C12orf43-209ENST00000546272 CSB-PGBD3P0DP91 1061 aa25.98■■□□□ 1.75
C12orf43-209ENST00000546272 QSER1Q2KHR3 1735 aa25.97■■□□□ 1.75
C12orf43-209ENST00000546272 ACSBG1Q96GR2 724 aa25.97■■□□□ 1.75
C12orf43-209ENST00000546272 USP6P35125 1406 aa25.97■■□□□ 1.75
C12orf43-209ENST00000546272 BTAF1O14981 1849 aa25.96■■□□□ 1.75
C12orf43-209ENST00000546272 HSPA6P17066 643 aa25.96■■□□□ 1.75
C12orf43-209ENST00000546272 SRPK2P78362 688 aaKnown RBP25.96■■□□□ 1.75
C12orf43-209ENST00000546272 CCDC7Q96M83 1385 aa25.96■■□□□ 1.75
C12orf43-209ENST00000546272 NLGN2Q8NFZ4 835 aa25.95■■□□□ 1.75
C12orf43-209ENST00000546272 KAT6BQ8WYB5 2073 aa25.95■■□□□ 1.74
C12orf43-209ENST00000546272 ARHGEF25Q86VW2 580 aa25.94■■□□□ 1.74
C12orf43-209ENST00000546272 TRPM1Q7Z4N2 1603 aa25.94■■□□□ 1.74
C12orf43-209ENST00000546272 LRRC4BQ9NT99 713 aa25.93■■□□□ 1.74
C12orf43-209ENST00000546272 ATP10DQ9P241 1426 aa25.93■■□□□ 1.74
C12orf43-209ENST00000546272 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
C12orf43-209ENST00000546272 AKT1S1Q96B36 256 aa25.92■■□□□ 1.74
C12orf43-209ENST00000546272 YBX3P16989 372 aaKnown RBP eCLIP25.91■■□□□ 1.74
C12orf43-209ENST00000546272 ABCC6O95255 1503 aa25.91■■□□□ 1.74
C12orf43-209ENST00000546272 KCNH5Q8NCM2 988 aa25.9■■□□□ 1.74
C12orf43-209ENST00000546272 GPBP1L1Q9HC44 474 aaPredicted RBP25.9■■□□□ 1.74
C12orf43-209ENST00000546272 CABP2Q9NPB3 220 aa25.89■■□□□ 1.74
C12orf43-209ENST00000546272 CABP1Q9NZU7 370 aa25.88■■□□□ 1.73
C12orf43-209ENST00000546272 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
C12orf43-209ENST00000546272 QRICH2Q9H0J4 1663 aa25.87■■□□□ 1.73
C12orf43-209ENST00000546272 SLC27A3Q5K4L6 730 aa25.87■■□□□ 1.73
C12orf43-209ENST00000546272 TFCP2L1Q9NZI6 479 aa25.85■■□□□ 1.73
C12orf43-209ENST00000546272 KIAA1210Q9ULL0 1709 aa25.85■■□□□ 1.73
C12orf43-209ENST00000546272 TUBGCP6Q96RT7 1819 aa25.84■■□□□ 1.73
C12orf43-209ENST00000546272 SOX12O15370 315 aa25.83■■□□□ 1.73
C12orf43-209ENST00000546272 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
C12orf43-209ENST00000546272 CENPJQ9HC77 1338 aaPredicted RBP25.81■■□□□ 1.72
C12orf43-209ENST00000546272 IL2RBP14784 551 aa25.8■■□□□ 1.72
C12orf43-209ENST00000546272 ADCY9O60503 1353 aa25.8■■□□□ 1.72
C12orf43-209ENST00000546272 NFAT5O94916 1531 aa25.78■■□□□ 1.72
C12orf43-209ENST00000546272 ZNF526Q8TF50 670 aaPredicted RBP25.77■■□□□ 1.72
C12orf43-209ENST00000546272 NLRP2Q9NX02 1062 aa25.77■■□□□ 1.72
C12orf43-209ENST00000546272 TTC21BQ7Z4L5 1316 aa25.77■■□□□ 1.72
C12orf43-209ENST00000546272 ZNF692Q9BU19 519 aaPredicted RBP25.76■■□□□ 1.71
C12orf43-209ENST00000546272 ERBB3P21860 1342 aa25.74■■□□□ 1.71
C12orf43-209ENST00000546272 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
C12orf43-209ENST00000546272 NBPF1Q3BBV0 1214 aa25.74■■□□□ 1.71
C12orf43-209ENST00000546272 KCNQ4P56696 695 aa25.71■■□□□ 1.71
C12orf43-209ENST00000546272 MSH5O43196 834 aa25.7■■□□□ 1.71
C12orf43-209ENST00000546272 CD2APQ9Y5K6 639 aa25.7■■□□□ 1.71
C12orf43-209ENST00000546272 LY75O60449 1722 aa25.7■■□□□ 1.7
C12orf43-209ENST00000546272 APLP1P51693 650 aa25.69■■□□□ 1.7
C12orf43-209ENST00000546272 KIF3CO14782 793 aa25.66■■□□□ 1.7
C12orf43-209ENST00000546272 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
C12orf43-209ENST00000546272 EVC2Q86UK5 1308 aa25.66■■□□□ 1.7
C12orf43-209ENST00000546272 DDX54Q8TDD1 881 aaKnown RBP25.65■■□□□ 1.7
C12orf43-209ENST00000546272 SYTL4Q96C24 671 aaPredicted RBP25.65■■□□□ 1.7
C12orf43-209ENST00000546272 LTN1O94822 1766 aa25.64■■□□□ 1.7
C12orf43-209ENST00000546272 MSL1Q68DK7 614 aa25.63■■□□□ 1.69
C12orf43-209ENST00000546272 DNAJC5GQ8N7S2 189 aa25.63■■□□□ 1.69
C12orf43-209ENST00000546272 ANKRD24Q8TF21 1146 aa25.63■■□□□ 1.69
C12orf43-209ENST00000546272 ANKRD36BQ8N2N9 1353 aa25.63■■□□□ 1.69
C12orf43-209ENST00000546272 CCNL1Q9UK58 526 aaPredicted RBP25.63■■□□□ 1.69
C12orf43-209ENST00000546272 PRIM1P49642 420 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms