RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 AXIN2Q9Y2T1 843 aa24.08■■□□□ 1.45
CPSF7-225ENST00000545934 NFAT5O94916 1531 aa24.08■■□□□ 1.45
CPSF7-225ENST00000545934 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.44
CPSF7-225ENST00000545934 DDB1Q16531 1140 aa24.07■■□□□ 1.44
CPSF7-225ENST00000545934 L3MBTL2Q969R5 705 aa24.07■■□□□ 1.44
CPSF7-225ENST00000545934 EVC2Q86UK5 1308 aa24.07■■□□□ 1.44
CPSF7-225ENST00000545934 ABCC6O95255 1503 aa24.06■■□□□ 1.44
CPSF7-225ENST00000545934 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
CPSF7-225ENST00000545934 TOM1L2Q6ZVM7 507 aa24.05■■□□□ 1.44
CPSF7-225ENST00000545934 ARHGEF25Q86VW2 580 aa24.05■■□□□ 1.44
CPSF7-225ENST00000545934 KCNQ2O43526 872 aa24.04■■□□□ 1.44
CPSF7-225ENST00000545934 SPON1Q9HCB6 807 aa24.04■■□□□ 1.44
CPSF7-225ENST00000545934 TTC21BQ7Z4L5 1316 aa24.04■■□□□ 1.44
CPSF7-225ENST00000545934 LTN1O94822 1766 aa24.03■■□□□ 1.44
CPSF7-225ENST00000545934 PTF1AQ7RTS3 328 aa24.03■■□□□ 1.44
CPSF7-225ENST00000545934 BCL11BQ9C0K0 894 aaPredicted RBP24.03■■□□□ 1.44
CPSF7-225ENST00000545934 MARCH10Q8NA82 808 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-225ENST00000545934 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-225ENST00000545934 CDCA7Q9BWT1 371 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-225ENST00000545934 NINLQ9Y2I6 1382 aa24.02■■□□□ 1.44
CPSF7-225ENST00000545934 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
CPSF7-225ENST00000545934 KCNH5Q8NCM2 988 aa24.01■■□□□ 1.43
CPSF7-225ENST00000545934 TTC21AQ8NDW8 1320 aa24.01■■□□□ 1.43
CPSF7-225ENST00000545934 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
CPSF7-225ENST00000545934 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
CPSF7-225ENST00000545934 MYOM1P52179 1685 aa23.99■■□□□ 1.43
CPSF7-225ENST00000545934 PROM2Q8N271 834 aa23.99■■□□□ 1.43
CPSF7-225ENST00000545934 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
CPSF7-225ENST00000545934 TNS2Q63HR2 1409 aa23.95■■□□□ 1.42
CPSF7-225ENST00000545934 PPP1R1BQ9UD71 204 aaPredicted RBP23.95■■□□□ 1.42
CPSF7-225ENST00000545934 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
CPSF7-225ENST00000545934 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
CPSF7-225ENST00000545934 SBNO2Q9Y2G9 1366 aa23.94■■□□□ 1.42
CPSF7-225ENST00000545934 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
CPSF7-225ENST00000545934 CD163L1Q9NR16 1453 aa23.94■■□□□ 1.42
CPSF7-225ENST00000545934 BTAF1O14981 1849 aa23.94■■□□□ 1.42
CPSF7-225ENST00000545934 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
CPSF7-225ENST00000545934 PAPPAQ13219 1627 aa23.93■■□□□ 1.42
CPSF7-225ENST00000545934 YY1P25490 414 aa23.93■■□□□ 1.42
CPSF7-225ENST00000545934 PDGFDQ9GZP0 370 aaPredicted RBP23.93■■□□□ 1.42
CPSF7-225ENST00000545934 SOX12O15370 315 aa23.9■■□□□ 1.42
CPSF7-225ENST00000545934 EXOC5O00471 708 aa23.89■■□□□ 1.41
CPSF7-225ENST00000545934 CSB-PGBD3P0DP91 1061 aa23.89■■□□□ 1.41
CPSF7-225ENST00000545934 TXNRD1Q16881 649 aa23.89■■□□□ 1.41
CPSF7-225ENST00000545934 PTGER2P43116 358 aa23.88■■□□□ 1.41
CPSF7-225ENST00000545934 QSER1Q2KHR3 1735 aa23.87■■□□□ 1.41
CPSF7-225ENST00000545934 FAM208AQ9UK61 1670 aaKnown RBP23.87■■□□□ 1.41
CPSF7-225ENST00000545934 ERBB3P21860 1342 aa23.86■■□□□ 1.41
CPSF7-225ENST00000545934 CHD4Q14839 1912 aa23.86■■□□□ 1.41
CPSF7-225ENST00000545934 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
CPSF7-225ENST00000545934 COL24A1Q17RW2 1714 aa23.84■■□□□ 1.41
CPSF7-225ENST00000545934 KAT6BQ8WYB5 2073 aa23.84■■□□□ 1.41
CPSF7-225ENST00000545934 ZBTB7AO95365 584 aa23.84■■□□□ 1.41
CPSF7-225ENST00000545934 STK32BQ9NY57 414 aa23.83■■□□□ 1.41
CPSF7-225ENST00000545934 DCAF8L1A6NGE4 600 aa23.82■■□□□ 1.4
CPSF7-225ENST00000545934 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
CPSF7-225ENST00000545934 NME9Q86XW9 330 aa23.81■■□□□ 1.4
CPSF7-225ENST00000545934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
CPSF7-225ENST00000545934 SGIP1Q9BQI5 828 aa23.81■■□□□ 1.4
CPSF7-225ENST00000545934 EDC4Q6P2E9 1401 aaKnown RBP23.8■■□□□ 1.4
CPSF7-225ENST00000545934 SHANK3Q9BYB0 1731 aa23.8■■□□□ 1.4
CPSF7-225ENST00000545934 TUBGCP6Q96RT7 1819 aa23.8■■□□□ 1.4
CPSF7-225ENST00000545934 RGPD2P0DJD1 1756 aa23.79■■□□□ 1.4
CPSF7-225ENST00000545934 IL2RBP14784 551 aa23.78■■□□□ 1.4
CPSF7-225ENST00000545934 MTFR1LQ9H019 292 aa23.78■■□□□ 1.4
CPSF7-225ENST00000545934 ATF5Q9Y2D1 282 aaPredicted RBP23.78■■□□□ 1.4
CPSF7-225ENST00000545934 LY75O60449 1722 aa23.77■■□□□ 1.4
CPSF7-225ENST00000545934 NLRP2Q9NX02 1062 aa23.77■■□□□ 1.4
CPSF7-225ENST00000545934 UTRNP46939 3433 aa23.77■■□□□ 1.4
CPSF7-225ENST00000545934 ACSBG1Q96GR2 724 aa23.76■■□□□ 1.39
CPSF7-225ENST00000545934 ANKRD24Q8TF21 1146 aa23.75■■□□□ 1.39
CPSF7-225ENST00000545934 SLC12A5Q9H2X9 1139 aa23.75■■□□□ 1.39
CPSF7-225ENST00000545934 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
CPSF7-225ENST00000545934 A0A1W2PP64 1363 aa23.75■■□□□ 1.39
CPSF7-225ENST00000545934 SYT17Q9BSW7 474 aa23.74■■□□□ 1.39
CPSF7-225ENST00000545934 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
CPSF7-225ENST00000545934 FHDC1Q9C0D6 1143 aaPredicted RBP23.74■■□□□ 1.39
CPSF7-225ENST00000545934 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
CPSF7-225ENST00000545934 PUS7Q96PZ0 661 aaKnown RBP23.73■■□□□ 1.39
CPSF7-225ENST00000545934 TMC1Q8TDI8 760 aa23.72■■□□□ 1.39
CPSF7-225ENST00000545934 MAP3K5Q99683 1374 aa23.72■■□□□ 1.39
CPSF7-225ENST00000545934 LRRC4BQ9NT99 713 aa23.7■■□□□ 1.38
CPSF7-225ENST00000545934 ZNF827Q17R98 1081 aa23.69■■□□□ 1.38
CPSF7-225ENST00000545934 IP6K1Q92551 441 aa23.69■■□□□ 1.38
CPSF7-225ENST00000545934 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
CPSF7-225ENST00000545934 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
CPSF7-225ENST00000545934 ARXQ96QS3 562 aa23.66■■□□□ 1.38
CPSF7-225ENST00000545934 ZNF784Q8NCA9 323 aaPredicted RBP23.64■■□□□ 1.37
CPSF7-225ENST00000545934 SLC27A3Q5K4L6 730 aa23.63■■□□□ 1.37
CPSF7-225ENST00000545934 TESK2Q96S53 571 aa23.63■■□□□ 1.37
CPSF7-225ENST00000545934 NSD2O96028 1365 aa23.62■■□□□ 1.37
CPSF7-225ENST00000545934 ANKRD36BQ8N2N9 1353 aa23.61■■□□□ 1.37
CPSF7-225ENST00000545934 MAP3K19Q56UN5 1328 aa23.6■■□□□ 1.37
CPSF7-225ENST00000545934 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
CPSF7-225ENST00000545934 SLC16A10Q8TF71 515 aa23.6■■□□□ 1.37
CPSF7-225ENST00000545934 KIF20BQ96Q89 1820 aa23.6■■□□□ 1.37
CPSF7-225ENST00000545934 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
CPSF7-225ENST00000545934 MEGF6O75095 1541 aa23.59■■□□□ 1.37
CPSF7-225ENST00000545934 TAF1LQ8IZX4 1826 aa23.59■■□□□ 1.37
CPSF7-225ENST00000545934 HOXC9P31274 260 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms