RNA–Protein interactions for RNA: ENST00000545436.5

LMO3-232, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-232ENST00000545436 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
LMO3-232ENST00000545436 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
LMO3-232ENST00000545436 COL18A1P39060 1754 aa16.57■□□□□ 0.24
LMO3-232ENST00000545436 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
LMO3-232ENST00000545436 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
LMO3-232ENST00000545436 HOXC9P31274 260 aa16.56■□□□□ 0.24
LMO3-232ENST00000545436 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
LMO3-232ENST00000545436 RGPD1P0DJD0 1748 aa16.56■□□□□ 0.24
LMO3-232ENST00000545436 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
LMO3-232ENST00000545436 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
LMO3-232ENST00000545436 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
LMO3-232ENST00000545436 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
LMO3-232ENST00000545436 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
LMO3-232ENST00000545436 IL13P35225 146 aa16.53■□□□□ 0.24
LMO3-232ENST00000545436 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
LMO3-232ENST00000545436 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
LMO3-232ENST00000545436 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
LMO3-232ENST00000545436 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
LMO3-232ENST00000545436 SOX12O15370 315 aa16.52■□□□□ 0.24
LMO3-232ENST00000545436 FCHSD2O94868 740 aa16.52■□□□□ 0.24
LMO3-232ENST00000545436 NCAPD2Q15021 1401 aa16.52■□□□□ 0.23
LMO3-232ENST00000545436 KDRP35968 1356 aa16.51■□□□□ 0.23
LMO3-232ENST00000545436 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
LMO3-232ENST00000545436 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
LMO3-232ENST00000545436 ERBB3P21860 1342 aa16.5■□□□□ 0.23
LMO3-232ENST00000545436 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
LMO3-232ENST00000545436 FBLN1P23142 703 aa16.5■□□□□ 0.23
LMO3-232ENST00000545436 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
LMO3-232ENST00000545436 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
LMO3-232ENST00000545436 NEFMP07197 916 aa16.49■□□□□ 0.23
LMO3-232ENST00000545436 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
LMO3-232ENST00000545436 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
LMO3-232ENST00000545436 HSPA1LP34931 641 aa16.48■□□□□ 0.23
LMO3-232ENST00000545436 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
LMO3-232ENST00000545436 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
LMO3-232ENST00000545436 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
LMO3-232ENST00000545436 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
LMO3-232ENST00000545436 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
LMO3-232ENST00000545436 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
LMO3-232ENST00000545436 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
LMO3-232ENST00000545436 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
LMO3-232ENST00000545436 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
LMO3-232ENST00000545436 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
LMO3-232ENST00000545436 SLIT2O94813 1529 aa16.44■□□□□ 0.22
LMO3-232ENST00000545436 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
LMO3-232ENST00000545436 NRAPQ86VF7 1730 aa16.43■□□□□ 0.22
LMO3-232ENST00000545436 EYA1Q99502 592 aa16.43■□□□□ 0.22
LMO3-232ENST00000545436 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
LMO3-232ENST00000545436 AXIN2Q9Y2T1 843 aa16.43■□□□□ 0.22
LMO3-232ENST00000545436 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
LMO3-232ENST00000545436 CRB1P82279 1406 aa16.42■□□□□ 0.22
LMO3-232ENST00000545436 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
LMO3-232ENST00000545436 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
LMO3-232ENST00000545436 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
LMO3-232ENST00000545436 ZBED9Q6R2W3 1325 aa16.41■□□□□ 0.22
LMO3-232ENST00000545436 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
LMO3-232ENST00000545436 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
LMO3-232ENST00000545436 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
LMO3-232ENST00000545436 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
LMO3-232ENST00000545436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.22
LMO3-232ENST00000545436 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
LMO3-232ENST00000545436 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
LMO3-232ENST00000545436 EVA1CP58658 441 aa16.39■□□□□ 0.21
LMO3-232ENST00000545436 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
LMO3-232ENST00000545436 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 LRP6O75581 1613 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
LMO3-232ENST00000545436 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
LMO3-232ENST00000545436 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
LMO3-232ENST00000545436 ADAMTS2O95450 1211 aa16.37■□□□□ 0.21
LMO3-232ENST00000545436 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
LMO3-232ENST00000545436 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
LMO3-232ENST00000545436 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
LMO3-232ENST00000545436 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
LMO3-232ENST00000545436 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
LMO3-232ENST00000545436 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
LMO3-232ENST00000545436 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
LMO3-232ENST00000545436 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
LMO3-232ENST00000545436 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
LMO3-232ENST00000545436 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
LMO3-232ENST00000545436 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
LMO3-232ENST00000545436 HMOX1P09601 288 aa16.35■□□□□ 0.21
LMO3-232ENST00000545436 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
LMO3-232ENST00000545436 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
LMO3-232ENST00000545436 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
LMO3-232ENST00000545436 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
LMO3-232ENST00000545436 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
LMO3-232ENST00000545436 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
LMO3-232ENST00000545436 MEX3CQ5U5Q3 659 aaKnown RBP16.34■□□□□ 0.21
LMO3-232ENST00000545436 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
LMO3-232ENST00000545436 APAF1O14727 1248 aa16.33■□□□□ 0.2
LMO3-232ENST00000545436 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
LMO3-232ENST00000545436 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
LMO3-232ENST00000545436 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
LMO3-232ENST00000545436 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms