RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 NBPF1Q3BBV0 1214 aa16.74■□□□□ 0.27
TMEM258-208ENST00000545210 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
TMEM258-208ENST00000545210 CHD4Q14839 1912 aa16.74■□□□□ 0.27
TMEM258-208ENST00000545210 NLRP6P59044 892 aa16.73■□□□□ 0.27
TMEM258-208ENST00000545210 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
TMEM258-208ENST00000545210 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
TMEM258-208ENST00000545210 USP6P35125 1406 aa16.72■□□□□ 0.27
TMEM258-208ENST00000545210 UTRNP46939 3433 aa16.72■□□□□ 0.27
TMEM258-208ENST00000545210 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
TMEM258-208ENST00000545210 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
TMEM258-208ENST00000545210 ZBTB7AO95365 584 aa16.71■□□□□ 0.27
TMEM258-208ENST00000545210 PROM2Q8N271 834 aa16.71■□□□□ 0.27
TMEM258-208ENST00000545210 MARCH10Q8NA82 808 aaPredicted RBP16.7■□□□□ 0.26
TMEM258-208ENST00000545210 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
TMEM258-208ENST00000545210 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
TMEM258-208ENST00000545210 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
TMEM258-208ENST00000545210 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
TMEM258-208ENST00000545210 PTGER2P43116 358 aa16.68■□□□□ 0.26
TMEM258-208ENST00000545210 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
TMEM258-208ENST00000545210 NHSQ6T4R5 1651 aa16.67■□□□□ 0.26
TMEM258-208ENST00000545210 BCL9O00512 1426 aa16.67■□□□□ 0.26
TMEM258-208ENST00000545210 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
TMEM258-208ENST00000545210 CDCA7Q9BWT1 371 aaPredicted RBP16.66■□□□□ 0.26
TMEM258-208ENST00000545210 TRPM1Q7Z4N2 1603 aa16.66■□□□□ 0.26
TMEM258-208ENST00000545210 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
TMEM258-208ENST00000545210 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
TMEM258-208ENST00000545210 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
TMEM258-208ENST00000545210 BTAF1O14981 1849 aa16.64■□□□□ 0.25
TMEM258-208ENST00000545210 SOX12O15370 315 aa16.64■□□□□ 0.25
TMEM258-208ENST00000545210 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
TMEM258-208ENST00000545210 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
TMEM258-208ENST00000545210 LTN1O94822 1766 aa16.64■□□□□ 0.25
TMEM258-208ENST00000545210 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
TMEM258-208ENST00000545210 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
TMEM258-208ENST00000545210 SYT17Q9BSW7 474 aa16.63■□□□□ 0.25
TMEM258-208ENST00000545210 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
TMEM258-208ENST00000545210 NFAT5O94916 1531 aa16.62■□□□□ 0.25
TMEM258-208ENST00000545210 EXOC5O00471 708 aa16.62■□□□□ 0.25
TMEM258-208ENST00000545210 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
TMEM258-208ENST00000545210 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
TMEM258-208ENST00000545210 MTFR1LQ9H019 292 aa16.61■□□□□ 0.25
TMEM258-208ENST00000545210 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
TMEM258-208ENST00000545210 TNS2Q63HR2 1409 aa16.61■□□□□ 0.25
TMEM258-208ENST00000545210 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
TMEM258-208ENST00000545210 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
TMEM258-208ENST00000545210 SGIP1Q9BQI5 828 aa16.59■□□□□ 0.25
TMEM258-208ENST00000545210 ABCC6O95255 1503 aa16.59■□□□□ 0.25
TMEM258-208ENST00000545210 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
TMEM258-208ENST00000545210 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
TMEM258-208ENST00000545210 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
TMEM258-208ENST00000545210 QSER1Q2KHR3 1735 aa16.56■□□□□ 0.24
TMEM258-208ENST00000545210 USP54Q70EL1 1684 aa16.56■□□□□ 0.24
TMEM258-208ENST00000545210 GOLGB1Q14789 3259 aaKnown RBP16.56■□□□□ 0.24
TMEM258-208ENST00000545210 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
TMEM258-208ENST00000545210 ARXQ96QS3 562 aa16.56■□□□□ 0.24
TMEM258-208ENST00000545210 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
TMEM258-208ENST00000545210 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
TMEM258-208ENST00000545210 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
TMEM258-208ENST00000545210 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
TMEM258-208ENST00000545210 C1QTNF8P60827 252 aa16.52■□□□□ 0.24
TMEM258-208ENST00000545210 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
TMEM258-208ENST00000545210 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
TMEM258-208ENST00000545210 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
TMEM258-208ENST00000545210 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
TMEM258-208ENST00000545210 ERBB3P21860 1342 aa16.51■□□□□ 0.23
TMEM258-208ENST00000545210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.51■□□□□ 0.23
TMEM258-208ENST00000545210 IL2RBP14784 551 aa16.5■□□□□ 0.23
TMEM258-208ENST00000545210 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
TMEM258-208ENST00000545210 GPR162Q16538 588 aa16.49■□□□□ 0.23
TMEM258-208ENST00000545210 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
TMEM258-208ENST00000545210 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
TMEM258-208ENST00000545210 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
TMEM258-208ENST00000545210 LY75O60449 1722 aa16.48■□□□□ 0.23
TMEM258-208ENST00000545210 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
TMEM258-208ENST00000545210 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
TMEM258-208ENST00000545210 NME9Q86XW9 330 aa16.47■□□□□ 0.23
TMEM258-208ENST00000545210 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
TMEM258-208ENST00000545210 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
TMEM258-208ENST00000545210 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
TMEM258-208ENST00000545210 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
TMEM258-208ENST00000545210 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
TMEM258-208ENST00000545210 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
TMEM258-208ENST00000545210 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
TMEM258-208ENST00000545210 CEP350Q5VT06 3117 aa16.45■□□□□ 0.22
TMEM258-208ENST00000545210 POLD1P28340 1107 aa16.43■□□□□ 0.22
TMEM258-208ENST00000545210 KCNQ4P56696 695 aa16.43■□□□□ 0.22
TMEM258-208ENST00000545210 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
TMEM258-208ENST00000545210 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
TMEM258-208ENST00000545210 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
TMEM258-208ENST00000545210 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
TMEM258-208ENST00000545210 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
TMEM258-208ENST00000545210 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
TMEM258-208ENST00000545210 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
TMEM258-208ENST00000545210 NLGN2Q8NFZ4 835 aa16.41■□□□□ 0.22
TMEM258-208ENST00000545210 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
TMEM258-208ENST00000545210 EDC4Q6P2E9 1401 aaKnown RBP16.4■□□□□ 0.22
TMEM258-208ENST00000545210 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
TMEM258-208ENST00000545210 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
TMEM258-208ENST00000545210 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
TMEM258-208ENST00000545210 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms