RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 RREB1Q92766 1687 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
DDX11-228ENST00000545115 DDB1Q16531 1140 aa20.1■□□□□ 0.81
DDX11-228ENST00000545115 SOX12O15370 315 aa20.09■□□□□ 0.81
DDX11-228ENST00000545115 PEAK1Q9H792 1746 aa20.09■□□□□ 0.81
DDX11-228ENST00000545115 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
DDX11-228ENST00000545115 NFAT5O94916 1531 aa20.08■□□□□ 0.81
DDX11-228ENST00000545115 NUP188Q5SRE5 1749 aa20.08■□□□□ 0.81
DDX11-228ENST00000545115 MON2Q7Z3U7 1717 aa20.08■□□□□ 0.81
DDX11-228ENST00000545115 CDCA7Q9BWT1 371 aaPredicted RBP20.08■□□□□ 0.81
DDX11-228ENST00000545115 ABCC6O95255 1503 aa20.07■□□□□ 0.8
DDX11-228ENST00000545115 WNK3Q9BYP7 1800 aa20.07■□□□□ 0.8
DDX11-228ENST00000545115 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
DDX11-228ENST00000545115 CSB-PGBD3P0DP91 1061 aa20.06■□□□□ 0.8
DDX11-228ENST00000545115 CARD10Q9BWT7 1032 aa20.05■□□□□ 0.8
DDX11-228ENST00000545115 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
DDX11-228ENST00000545115 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
DDX11-228ENST00000545115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
DDX11-228ENST00000545115 USP54Q70EL1 1684 aa20.03■□□□□ 0.8
DDX11-228ENST00000545115 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
DDX11-228ENST00000545115 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
DDX11-228ENST00000545115 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
DDX11-228ENST00000545115 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
DDX11-228ENST00000545115 BCL9O00512 1426 aa20.02■□□□□ 0.8
DDX11-228ENST00000545115 PLSCR1O15162 318 aa20.02■□□□□ 0.8
DDX11-228ENST00000545115 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.8
DDX11-228ENST00000545115 TMC1Q8TDI8 760 aa20.02■□□□□ 0.8
DDX11-228ENST00000545115 SBF2Q86WG5 1849 aa20.02■□□□□ 0.79
DDX11-228ENST00000545115 MARCH10Q8NA82 808 aaPredicted RBP20.01■□□□□ 0.79
DDX11-228ENST00000545115 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
DDX11-228ENST00000545115 NME9Q86XW9 330 aa20■□□□□ 0.79
DDX11-228ENST00000545115 EDC4Q6P2E9 1401 aaKnown RBP20■□□□□ 0.79
DDX11-228ENST00000545115 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
DDX11-228ENST00000545115 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
DDX11-228ENST00000545115 ERBB3P21860 1342 aa19.99■□□□□ 0.79
DDX11-228ENST00000545115 A0A1W2PP64 1363 aa19.98■□□□□ 0.79
DDX11-228ENST00000545115 EXOC5O00471 708 aa19.98■□□□□ 0.79
DDX11-228ENST00000545115 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
DDX11-228ENST00000545115 TNS2Q63HR2 1409 aa19.98■□□□□ 0.79
DDX11-228ENST00000545115 PTF1AQ7RTS3 328 aa19.96■□□□□ 0.79
DDX11-228ENST00000545115 LTN1O94822 1766 aa19.95■□□□□ 0.78
DDX11-228ENST00000545115 NINLQ9Y2I6 1382 aa19.95■□□□□ 0.78
DDX11-228ENST00000545115 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
DDX11-228ENST00000545115 TESK2Q96S53 571 aa19.93■□□□□ 0.78
DDX11-228ENST00000545115 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
DDX11-228ENST00000545115 ANO8Q9HCE9 1232 aaPredicted RBP19.93■□□□□ 0.78
DDX11-228ENST00000545115 KCNQ2O43526 872 aa19.92■□□□□ 0.78
DDX11-228ENST00000545115 SLC24A1O60721 1099 aa19.92■□□□□ 0.78
DDX11-228ENST00000545115 ANKRD24Q8TF21 1146 aa19.92■□□□□ 0.78
DDX11-228ENST00000545115 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
DDX11-228ENST00000545115 IL2RBP14784 551 aa19.91■□□□□ 0.78
DDX11-228ENST00000545115 PROM2Q8N271 834 aa19.9■□□□□ 0.78
DDX11-228ENST00000545115 PPP1R1BQ9UD71 204 aaPredicted RBP19.89■□□□□ 0.77
DDX11-228ENST00000545115 NHSQ6T4R5 1651 aa19.88■□□□□ 0.77
DDX11-228ENST00000545115 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
DDX11-228ENST00000545115 CASZ1Q86V15 1759 aa19.86■□□□□ 0.77
DDX11-228ENST00000545115 IP6K1Q92551 441 aa19.86■□□□□ 0.77
DDX11-228ENST00000545115 COG3Q96JB2 828 aa19.86■□□□□ 0.77
DDX11-228ENST00000545115 ANKRD36BQ8N2N9 1353 aa19.85■□□□□ 0.77
DDX11-228ENST00000545115 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
DDX11-228ENST00000545115 ACSBG1Q96GR2 724 aa19.85■□□□□ 0.77
DDX11-228ENST00000545115 STK32BQ9NY57 414 aa19.85■□□□□ 0.77
DDX11-228ENST00000545115 FAM208AQ9UK61 1670 aaKnown RBP19.84■□□□□ 0.77
DDX11-228ENST00000545115 MAP3K19Q56UN5 1328 aa19.82■□□□□ 0.76
DDX11-228ENST00000545115 SLC15A2Q16348 729 aa19.82■□□□□ 0.76
DDX11-228ENST00000545115 PDGFDQ9GZP0 370 aaPredicted RBP19.82■□□□□ 0.76
DDX11-228ENST00000545115 USP47Q96K76 1375 aa19.82■□□□□ 0.76
DDX11-228ENST00000545115 TMF1P82094 1093 aa19.81■□□□□ 0.76
DDX11-228ENST00000545115 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
DDX11-228ENST00000545115 ZBTB7AO95365 584 aa19.8■□□□□ 0.76
DDX11-228ENST00000545115 HOXC9P31274 260 aa19.8■□□□□ 0.76
DDX11-228ENST00000545115 AMPHP49418 695 aa19.8■□□□□ 0.76
DDX11-228ENST00000545115 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
DDX11-228ENST00000545115 BTAF1O14981 1849 aa19.79■□□□□ 0.76
DDX11-228ENST00000545115 PAPPAQ13219 1627 aa19.77■□□□□ 0.76
DDX11-228ENST00000545115 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
DDX11-228ENST00000545115 FBLN1P23142 703 aa19.77■□□□□ 0.76
DDX11-228ENST00000545115 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
DDX11-228ENST00000545115 PTGER2P43116 358 aa19.76■□□□□ 0.75
DDX11-228ENST00000545115 FYB1O15117 783 aa19.75■□□□□ 0.75
DDX11-228ENST00000545115 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
DDX11-228ENST00000545115 MTFR1LQ9H019 292 aa19.75■□□□□ 0.75
DDX11-228ENST00000545115 ATF5Q9Y2D1 282 aaPredicted RBP19.75■□□□□ 0.75
DDX11-228ENST00000545115 MYOM1P52179 1685 aa19.75■□□□□ 0.75
DDX11-228ENST00000545115 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
DDX11-228ENST00000545115 GGNBP2Q9H3C7 697 aa19.74■□□□□ 0.75
DDX11-228ENST00000545115 YY1P25490 414 aa19.73■□□□□ 0.75
DDX11-228ENST00000545115 MEGF6O75095 1541 aa19.72■□□□□ 0.75
DDX11-228ENST00000545115 SMG6Q86US8 1419 aaKnown RBP19.72■□□□□ 0.75
DDX11-228ENST00000545115 LRRC4BQ9NT99 713 aa19.72■□□□□ 0.75
DDX11-228ENST00000545115 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
DDX11-228ENST00000545115 SLC27A3Q5K4L6 730 aa19.71■□□□□ 0.75
DDX11-228ENST00000545115 ZCRB1Q8TBF4 217 aaKnown RBP19.71■□□□□ 0.75
DDX11-228ENST00000545115 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
DDX11-228ENST00000545115 ZNF827Q17R98 1081 aa19.7■□□□□ 0.74
DDX11-228ENST00000545115 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
DDX11-228ENST00000545115 DOT1LQ8TEK3 1739 aa19.69■□□□□ 0.74
DDX11-228ENST00000545115 SHANK3Q9BYB0 1731 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms