RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 CD2APQ9Y5K6 639 aa10.87□□□□□ -0.67
CIT-215ENST00000544800 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
CIT-215ENST00000544800 CCDC85CA6NKD9 419 aa10.86□□□□□ -0.67
CIT-215ENST00000544800 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
CIT-215ENST00000544800 KIAA0232Q92628 1395 aa10.86□□□□□ -0.67
CIT-215ENST00000544800 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
CIT-215ENST00000544800 BCL9O00512 1426 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 VGFO15240 615 aaPredicted RBP10.85□□□□□ -0.67
CIT-215ENST00000544800 DDB1Q16531 1140 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 ZNF827Q17R98 1081 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 WAPLQ7Z5K2 1190 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 CHIC2Q9UKJ5 165 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 ATP7BP35670 1465 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 NRXN1Q9ULB1 1477 aa10.85□□□□□ -0.67
CIT-215ENST00000544800 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
CIT-215ENST00000544800 SBF2Q86WG5 1849 aa10.84□□□□□ -0.67
CIT-215ENST00000544800 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
CIT-215ENST00000544800 MARCH10Q8NA82 808 aaPredicted RBP10.82□□□□□ -0.68
CIT-215ENST00000544800 AKT1S1Q96B36 256 aa10.82□□□□□ -0.68
CIT-215ENST00000544800 ZC3H6P61129 1189 aaKnown RBP10.81□□□□□ -0.68
CIT-215ENST00000544800 PNPLA7Q6ZV29 1317 aa10.81□□□□□ -0.68
CIT-215ENST00000544800 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
CIT-215ENST00000544800 AIDAQ96BJ3 306 aa10.8□□□□□ -0.68
CIT-215ENST00000544800 TNRC18O15417 2968 aaPredicted RBP10.8□□□□□ -0.68
CIT-215ENST00000544800 TOPAZ1Q8N9V7 1692 aa10.79□□□□□ -0.68
CIT-215ENST00000544800 GPRASP1Q5JY77 1395 aa10.79□□□□□ -0.68
CIT-215ENST00000544800 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
CIT-215ENST00000544800 DAPK1P53355 1430 aa10.79□□□□□ -0.68
CIT-215ENST00000544800 TFCP2L1Q9NZI6 479 aa10.79□□□□□ -0.68
CIT-215ENST00000544800 LBX1P52954 281 aa10.78□□□□□ -0.68
CIT-215ENST00000544800 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.68
CIT-215ENST00000544800 PAPPAQ13219 1627 aa10.77□□□□□ -0.68
CIT-215ENST00000544800 PRPF38BQ5VTL8 546 aaKnown RBP10.77□□□□□ -0.69
CIT-215ENST00000544800 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
CIT-215ENST00000544800 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
CIT-215ENST00000544800 STK26Q9P289 416 aa10.77□□□□□ -0.69
CIT-215ENST00000544800 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
CIT-215ENST00000544800 C10orf71Q711Q0 1435 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 ANKRD50Q9ULJ7 1429 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 E9PCH4 1651 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
CIT-215ENST00000544800 IGSF1Q8N6C5 1336 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 KDM2BQ8NHM5 1336 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 ANKRD30BQ9BXX2 1392 aa10.76□□□□□ -0.69
CIT-215ENST00000544800 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
CIT-215ENST00000544800 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
CIT-215ENST00000544800 ALS2Q96Q42 1657 aa10.74□□□□□ -0.69
CIT-215ENST00000544800 CDCA7Q9BWT1 371 aaPredicted RBP10.74□□□□□ -0.69
CIT-215ENST00000544800 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
CIT-215ENST00000544800 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
CIT-215ENST00000544800 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
CIT-215ENST00000544800 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
CIT-215ENST00000544800 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
CIT-215ENST00000544800 MKRN1Q9UHC7 482 aaKnown RBP10.73□□□□□ -0.69
CIT-215ENST00000544800 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
CIT-215ENST00000544800 CRB1P82279 1406 aa10.73□□□□□ -0.69
CIT-215ENST00000544800 TRPM3Q9HCF6 1732 aaPredicted RBP10.72□□□□□ -0.69
CIT-215ENST00000544800 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
CIT-215ENST00000544800 PXDNLA1KZ92 1463 aa10.71□□□□□ -0.69
CIT-215ENST00000544800 DLL1O00548 723 aa10.71□□□□□ -0.69
CIT-215ENST00000544800 CLTCL1P53675 1640 aa10.71□□□□□ -0.69
CIT-215ENST00000544800 RPGRIP1LQ68CZ1 1315 aa10.71□□□□□ -0.69
CIT-215ENST00000544800 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
CIT-215ENST00000544800 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
CIT-215ENST00000544800 CRYBG1Q9Y4K1 1723 aa10.7□□□□□ -0.7
CIT-215ENST00000544800 CICQ96RK0 1608 aaPredicted RBP10.7□□□□□ -0.7
CIT-215ENST00000544800 PLEKHG2Q9H7P9 1386 aa10.7□□□□□ -0.7
CIT-215ENST00000544800 EXOC5O00471 708 aa10.7□□□□□ -0.7
CIT-215ENST00000544800 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
CIT-215ENST00000544800 QSER1Q2KHR3 1735 aa10.7□□□□□ -0.7
CIT-215ENST00000544800 LRRC37A3O60309 1634 aa10.69□□□□□ -0.7
CIT-215ENST00000544800 CPDO75976 1380 aa10.69□□□□□ -0.7
CIT-215ENST00000544800 HSPA8P11142 646 aaKnown RBP10.69□□□□□ -0.7
CIT-215ENST00000544800 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
CIT-215ENST00000544800 ARHGAP27Q6ZUM4 889 aa10.69□□□□□ -0.7
CIT-215ENST00000544800 ANKARQ7Z5J8 1434 aa10.68□□□□□ -0.7
CIT-215ENST00000544800 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
CIT-215ENST00000544800 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
CIT-215ENST00000544800 GCC1Q96CN9 775 aa10.68□□□□□ -0.7
CIT-215ENST00000544800 ACSBG1Q96GR2 724 aa10.68□□□□□ -0.7
CIT-215ENST00000544800 NGDNQ8NEJ9 315 aaKnown RBP10.67□□□□□ -0.7
CIT-215ENST00000544800 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
CIT-215ENST00000544800 TOM1L2Q6ZVM7 507 aa10.66□□□□□ -0.7
CIT-215ENST00000544800 KCPQ6ZWJ8 1503 aa10.66□□□□□ -0.7
CIT-215ENST00000544800 USP6P35125 1406 aa10.66□□□□□ -0.7
CIT-215ENST00000544800 NUP155O75694 1391 aa10.65□□□□□ -0.7
CIT-215ENST00000544800 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
CIT-215ENST00000544800 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
CIT-215ENST00000544800 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
CIT-215ENST00000544800 TMEM132EQ6IEE7 984 aa10.64□□□□□ -0.71
CIT-215ENST00000544800 CUL9Q8IWT3 2517 aa10.64□□□□□ -0.71
CIT-215ENST00000544800 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
CIT-215ENST00000544800 VEGFBP49765 207 aa10.63□□□□□ -0.71
CIT-215ENST00000544800 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
CIT-215ENST00000544800 BCS1LQ9Y276 419 aa10.62□□□□□ -0.71
CIT-215ENST00000544800 IFT172Q9UG01 1749 aa10.61□□□□□ -0.71
CIT-215ENST00000544800 ATXN8OSP0DMR3 200 aa10.61□□□□□ -0.71
CIT-215ENST00000544800 KANK4Q5T7N3 995 aaPredicted RBP10.61□□□□□ -0.71
CIT-215ENST00000544800 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
CIT-215ENST00000544800 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms