RNA–Protein interactions for RNA: ENST00000544679.1

NDUFA9-209, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2

Gene NDUFA9, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-209ENST00000544679 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
NDUFA9-209ENST00000544679 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
NDUFA9-209ENST00000544679 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
NDUFA9-209ENST00000544679 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
NDUFA9-209ENST00000544679 MARCH10Q8NA82 808 aaPredicted RBP12.86□□□□□ -0.35
NDUFA9-209ENST00000544679 CARD10Q9BWT7 1032 aa12.86□□□□□ -0.35
NDUFA9-209ENST00000544679 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
NDUFA9-209ENST00000544679 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
NDUFA9-209ENST00000544679 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
NDUFA9-209ENST00000544679 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
NDUFA9-209ENST00000544679 PROM2Q8N271 834 aa12.84□□□□□ -0.35
NDUFA9-209ENST00000544679 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
NDUFA9-209ENST00000544679 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
NDUFA9-209ENST00000544679 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
NDUFA9-209ENST00000544679 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
NDUFA9-209ENST00000544679 BCL9O00512 1426 aa12.83□□□□□ -0.36
NDUFA9-209ENST00000544679 SOX12O15370 315 aa12.83□□□□□ -0.36
NDUFA9-209ENST00000544679 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
NDUFA9-209ENST00000544679 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
NDUFA9-209ENST00000544679 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
NDUFA9-209ENST00000544679 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
NDUFA9-209ENST00000544679 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
NDUFA9-209ENST00000544679 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
NDUFA9-209ENST00000544679 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
NDUFA9-209ENST00000544679 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
NDUFA9-209ENST00000544679 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
NDUFA9-209ENST00000544679 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
NDUFA9-209ENST00000544679 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
NDUFA9-209ENST00000544679 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
NDUFA9-209ENST00000544679 USP6P35125 1406 aa12.79□□□□□ -0.36
NDUFA9-209ENST00000544679 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
NDUFA9-209ENST00000544679 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
NDUFA9-209ENST00000544679 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
NDUFA9-209ENST00000544679 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
NDUFA9-209ENST00000544679 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
NDUFA9-209ENST00000544679 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
NDUFA9-209ENST00000544679 IL2RBP14784 551 aa12.77□□□□□ -0.37
NDUFA9-209ENST00000544679 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
NDUFA9-209ENST00000544679 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.37
NDUFA9-209ENST00000544679 MYOM1P52179 1685 aa12.77□□□□□ -0.37
NDUFA9-209ENST00000544679 MSH5O43196 834 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
NDUFA9-209ENST00000544679 TOPAZ1Q8N9V7 1692 aa12.75□□□□□ -0.37
NDUFA9-209ENST00000544679 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
NDUFA9-209ENST00000544679 SLIT3O75094 1523 aa12.74□□□□□ -0.37
NDUFA9-209ENST00000544679 TNS2Q63HR2 1409 aa12.74□□□□□ -0.37
NDUFA9-209ENST00000544679 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
NDUFA9-209ENST00000544679 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
NDUFA9-209ENST00000544679 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
NDUFA9-209ENST00000544679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
NDUFA9-209ENST00000544679 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
NDUFA9-209ENST00000544679 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
NDUFA9-209ENST00000544679 HDGFL2Q7Z4V5 671 aaPredicted RBP12.7□□□□□ -0.38
NDUFA9-209ENST00000544679 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
NDUFA9-209ENST00000544679 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
NDUFA9-209ENST00000544679 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
NDUFA9-209ENST00000544679 ERBB3P21860 1342 aa12.69□□□□□ -0.38
NDUFA9-209ENST00000544679 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
NDUFA9-209ENST00000544679 CHD4Q14839 1912 aa12.68□□□□□ -0.38
NDUFA9-209ENST00000544679 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
NDUFA9-209ENST00000544679 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
NDUFA9-209ENST00000544679 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
NDUFA9-209ENST00000544679 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
NDUFA9-209ENST00000544679 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 TERF2IPQ9NYB0 399 aa12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 ABCC6O95255 1503 aa12.66□□□□□ -0.38
NDUFA9-209ENST00000544679 HSPA6P17066 643 aa12.65□□□□□ -0.38
NDUFA9-209ENST00000544679 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
NDUFA9-209ENST00000544679 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
NDUFA9-209ENST00000544679 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
NDUFA9-209ENST00000544679 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
NDUFA9-209ENST00000544679 USP47Q96K76 1375 aa12.64□□□□□ -0.39
NDUFA9-209ENST00000544679 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
NDUFA9-209ENST00000544679 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
NDUFA9-209ENST00000544679 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
NDUFA9-209ENST00000544679 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
NDUFA9-209ENST00000544679 COL18A1P39060 1754 aa12.63□□□□□ -0.39
NDUFA9-209ENST00000544679 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.395e-9■□□□□ 10
NDUFA9-209ENST00000544679 AMPHP49418 695 aa12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 NME9Q86XW9 330 aa12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
NDUFA9-209ENST00000544679 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
NDUFA9-209ENST00000544679 KCNQ4P56696 695 aa12.61□□□□□ -0.39
NDUFA9-209ENST00000544679 IP6K1Q92551 441 aa12.61□□□□□ -0.39
NDUFA9-209ENST00000544679 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
NDUFA9-209ENST00000544679 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
NDUFA9-209ENST00000544679 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
NDUFA9-209ENST00000544679 COG3Q96JB2 828 aa12.6□□□□□ -0.39
NDUFA9-209ENST00000544679 NFAT5O94916 1531 aa12.6□□□□□ -0.39
NDUFA9-209ENST00000544679 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms