RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
CDCA3-209ENST00000544610 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
CDCA3-209ENST00000544610 CPDO75976 1380 aa9.35□□□□□ -0.91
CDCA3-209ENST00000544610 PARD3Q8TEW0 1356 aa9.35□□□□□ -0.91
CDCA3-209ENST00000544610 USP19O94966 1318 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 ACEP12821 1306 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 PLEKHG3A1L390 1219 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 ZC3H6P61129 1189 aaKnown RBP9.34□□□□□ -0.91
CDCA3-209ENST00000544610 EZH2Q15910 746 aaKnown RBP9.34□□□□□ -0.91
CDCA3-209ENST00000544610 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 BARGINQ6ZT62 677 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 CAMTA1Q9Y6Y1 1673 aa9.34□□□□□ -0.91
CDCA3-209ENST00000544610 RREB1Q92766 1687 aa9.33□□□□□ -0.92
CDCA3-209ENST00000544610 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
CDCA3-209ENST00000544610 NUTM2GQ5VZR2 741 aa9.33□□□□□ -0.92
CDCA3-209ENST00000544610 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
CDCA3-209ENST00000544610 CAMKK2Q96RR4 588 aa9.33□□□□□ -0.92
CDCA3-209ENST00000544610 TRIM37O94972 964 aa9.32□□□□□ -0.92
CDCA3-209ENST00000544610 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
CDCA3-209ENST00000544610 SIN3AQ96ST3 1273 aa9.32□□□□□ -0.92
CDCA3-209ENST00000544610 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
CDCA3-209ENST00000544610 COL5A2P05997 1499 aaPredicted RBP9.32□□□□□ -0.92
CDCA3-209ENST00000544610 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
CDCA3-209ENST00000544610 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
CDCA3-209ENST00000544610 USP35Q9P2H5 1018 aa9.31□□□□□ -0.92
CDCA3-209ENST00000544610 THRAP3Q9Y2W1 955 aaKnown RBP9.31□□□□□ -0.92
CDCA3-209ENST00000544610 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
CDCA3-209ENST00000544610 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
CDCA3-209ENST00000544610 PARP4Q9UKK3 1724 aaKnown RBP9.31□□□□□ -0.92
CDCA3-209ENST00000544610 APBA3O96018 575 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 GCP02774 474 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 EVA1CP58658 441 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 PDE3BQ13370 1112 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 TCP11L2Q8N4U5 519 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 SLIT3O75094 1523 aa9.3□□□□□ -0.92
CDCA3-209ENST00000544610 CENPJQ9HC77 1338 aaPredicted RBP9.3□□□□□ -0.92
CDCA3-209ENST00000544610 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
CDCA3-209ENST00000544610 SRPK2P78362 688 aaKnown RBP9.29□□□□□ -0.92
CDCA3-209ENST00000544610 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 L3MBTL2Q969R5 705 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 USP6P35125 1406 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 CRB1P82279 1406 aa9.29□□□□□ -0.92
CDCA3-209ENST00000544610 PEAK1Q9H792 1746 aa9.28□□□□□ -0.92
CDCA3-209ENST00000544610 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
CDCA3-209ENST00000544610 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
CDCA3-209ENST00000544610 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
CDCA3-209ENST00000544610 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
CDCA3-209ENST00000544610 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.92
CDCA3-209ENST00000544610 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.92
CDCA3-209ENST00000544610 AATKQ6ZMQ8 1374 aa9.27□□□□□ -0.93
CDCA3-209ENST00000544610 PIK3C2AO00443 1686 aa9.27□□□□□ -0.93
CDCA3-209ENST00000544610 OVOS2A0A0G2JMS6 1433 aa9.27□□□□□ -0.93
CDCA3-209ENST00000544610 OVOS2A0A0J9YW53 1432 aa9.27□□□□□ -0.93
CDCA3-209ENST00000544610 OVOS2Q6IE36 1432 aa9.27□□□□□ -0.93
CDCA3-209ENST00000544610 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-209ENST00000544610 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-209ENST00000544610 TAOK2Q9UL54 1235 aa9.26□□□□□ -0.93
CDCA3-209ENST00000544610 COL18A1P39060 1754 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 TRPM1Q7Z4N2 1603 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 NLRP6P59044 892 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 CABP1Q9NZU7 370 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 WNK3Q9BYP7 1800 aa9.25□□□□□ -0.93
CDCA3-209ENST00000544610 BCL9O00512 1426 aa9.24□□□□□ -0.93
CDCA3-209ENST00000544610 CPSF1Q10570 1443 aaKnown RBP9.24□□□□□ -0.93
CDCA3-209ENST00000544610 SPDYE2BA6NHP3 402 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 PLSCR1O15162 318 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 SPDYE6P0CI01 402 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 DDB1Q16531 1140 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 WDR17Q8IZU2 1322 aa9.23□□□□□ -0.93
CDCA3-209ENST00000544610 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 SBF2Q86WG5 1849 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 NFAT5O94916 1531 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 ABCC6O95255 1503 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 TOM1L2Q6ZVM7 507 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 ARHGEF25Q86VW2 580 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 SPON1Q9HCB6 807 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 NINLQ9Y2I6 1382 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 CASZ1Q86V15 1759 aa9.22□□□□□ -0.93
CDCA3-209ENST00000544610 KCNQ2O43526 872 aa9.21□□□□□ -0.94
CDCA3-209ENST00000544610 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 KCNH5Q8NCM2 988 aa9.21□□□□□ -0.94
CDCA3-209ENST00000544610 ZNF692Q9BU19 519 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 ANO8Q9HCE9 1232 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-209ENST00000544610 TTC21BQ7Z4L5 1316 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms