RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 OVOS2A0A0J9YW53 1432 aa19.83■□□□□ 0.76
SEMA4D-224ENST00000544513 OVOS2Q6IE36 1432 aa19.83■□□□□ 0.76
SEMA4D-224ENST00000544513 NUP188Q5SRE5 1749 aa19.82■□□□□ 0.76
SEMA4D-224ENST00000544513 NFAT5O94916 1531 aa19.82■□□□□ 0.76
SEMA4D-224ENST00000544513 LRRC37A3O60309 1634 aa19.82■□□□□ 0.76
SEMA4D-224ENST00000544513 KTN1Q86UP2 1357 aaKnown RBP19.82■□□□□ 0.76
SEMA4D-224ENST00000544513 DDB1Q16531 1140 aa19.81■□□□□ 0.76
SEMA4D-224ENST00000544513 BCL9O00512 1426 aa19.8■□□□□ 0.76
SEMA4D-224ENST00000544513 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
SEMA4D-224ENST00000544513 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
SEMA4D-224ENST00000544513 ABCC6O95255 1503 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 MON2Q7Z3U7 1717 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 SBF2Q86WG5 1849 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
SEMA4D-224ENST00000544513 PLSCR1O15162 318 aa19.78■□□□□ 0.76
SEMA4D-224ENST00000544513 NBPF14Q5TI25 921 aa19.78■□□□□ 0.76
SEMA4D-224ENST00000544513 MARCH10Q8NA82 808 aaPredicted RBP19.78■□□□□ 0.76
SEMA4D-224ENST00000544513 RGPD5Q99666 1765 aa19.78■□□□□ 0.76
SEMA4D-224ENST00000544513 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.76
SEMA4D-224ENST00000544513 BCL11BQ9C0K0 894 aaPredicted RBP19.77■□□□□ 0.76
SEMA4D-224ENST00000544513 RGPD3A6NKT7 1758 aaPredicted RBP19.77■□□□□ 0.76
SEMA4D-224ENST00000544513 RGPD4Q7Z3J3 1758 aa19.77■□□□□ 0.76
SEMA4D-224ENST00000544513 USP54Q70EL1 1684 aa19.76■□□□□ 0.75
SEMA4D-224ENST00000544513 SOX12O15370 315 aa19.76■□□□□ 0.75
SEMA4D-224ENST00000544513 PTF1AQ7RTS3 328 aa19.75■□□□□ 0.75
SEMA4D-224ENST00000544513 CCDC7Q96M83 1385 aa19.73■□□□□ 0.75
SEMA4D-224ENST00000544513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.73■□□□□ 0.75
SEMA4D-224ENST00000544513 PUS7Q96PZ0 661 aaKnown RBP19.73■□□□□ 0.75
SEMA4D-224ENST00000544513 CSB-PGBD3P0DP91 1061 aa19.72■□□□□ 0.75
SEMA4D-224ENST00000544513 NME9Q86XW9 330 aa19.72■□□□□ 0.75
SEMA4D-224ENST00000544513 PROM2Q8N271 834 aa19.71■□□□□ 0.75
SEMA4D-224ENST00000544513 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
SEMA4D-224ENST00000544513 EDC4Q6P2E9 1401 aaKnown RBP19.7■□□□□ 0.74
SEMA4D-224ENST00000544513 EXOC5O00471 708 aa19.7■□□□□ 0.74
SEMA4D-224ENST00000544513 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
SEMA4D-224ENST00000544513 HDGFL2Q7Z4V5 671 aaPredicted RBP19.69■□□□□ 0.74
SEMA4D-224ENST00000544513 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
SEMA4D-224ENST00000544513 ERBB3P21860 1342 aa19.69■□□□□ 0.74
SEMA4D-224ENST00000544513 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
SEMA4D-224ENST00000544513 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
SEMA4D-224ENST00000544513 TNS2Q63HR2 1409 aa19.68■□□□□ 0.74
SEMA4D-224ENST00000544513 KCNQ2O43526 872 aa19.67■□□□□ 0.74
SEMA4D-224ENST00000544513 TESK2Q96S53 571 aa19.67■□□□□ 0.74
SEMA4D-224ENST00000544513 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
SEMA4D-224ENST00000544513 TERF2IPQ9NYB0 399 aa19.67■□□□□ 0.74
SEMA4D-224ENST00000544513 LTN1O94822 1766 aa19.65■□□□□ 0.74
SEMA4D-224ENST00000544513 NLRP2Q9NX02 1062 aa19.64■□□□□ 0.73
SEMA4D-224ENST00000544513 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
SEMA4D-224ENST00000544513 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
SEMA4D-224ENST00000544513 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
SEMA4D-224ENST00000544513 TXNRD1Q16881 649 aa19.62■□□□□ 0.73
SEMA4D-224ENST00000544513 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
SEMA4D-224ENST00000544513 IL2RBP14784 551 aa19.61■□□□□ 0.73
SEMA4D-224ENST00000544513 PDGFDQ9GZP0 370 aaPredicted RBP19.61■□□□□ 0.73
SEMA4D-224ENST00000544513 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
SEMA4D-224ENST00000544513 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
SEMA4D-224ENST00000544513 IP6K1Q92551 441 aa19.6■□□□□ 0.73
SEMA4D-224ENST00000544513 PPP1R1BQ9UD71 204 aaPredicted RBP19.58■□□□□ 0.72
SEMA4D-224ENST00000544513 SLC15A2Q16348 729 aa19.57■□□□□ 0.72
SEMA4D-224ENST00000544513 UTRNP46939 3433 aa19.57■□□□□ 0.72
SEMA4D-224ENST00000544513 PTGER2P43116 358 aa19.56■□□□□ 0.72
SEMA4D-224ENST00000544513 STK32BQ9NY57 414 aa19.56■□□□□ 0.72
SEMA4D-224ENST00000544513 ACSBG1Q96GR2 724 aa19.55■□□□□ 0.72
SEMA4D-224ENST00000544513 ZBTB7AO95365 584 aa19.54■□□□□ 0.72
SEMA4D-224ENST00000544513 COG3Q96JB2 828 aa19.54■□□□□ 0.72
SEMA4D-224ENST00000544513 ANKRD36BQ8N2N9 1353 aa19.54■□□□□ 0.72
SEMA4D-224ENST00000544513 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
SEMA4D-224ENST00000544513 FAM208AQ9UK61 1670 aaKnown RBP19.53■□□□□ 0.72
SEMA4D-224ENST00000544513 BTAF1O14981 1849 aa19.53■□□□□ 0.72
SEMA4D-224ENST00000544513 PAPPAQ13219 1627 aa19.52■□□□□ 0.72
SEMA4D-224ENST00000544513 FBLN1P23142 703 aa19.51■□□□□ 0.71
SEMA4D-224ENST00000544513 HOXC9P31274 260 aa19.51■□□□□ 0.71
SEMA4D-224ENST00000544513 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
SEMA4D-224ENST00000544513 SGIP1Q9BQI5 828 aa19.5■□□□□ 0.71
SEMA4D-224ENST00000544513 FYB1O15117 783 aa19.49■□□□□ 0.71
SEMA4D-224ENST00000544513 MTFR1LQ9H019 292 aa19.49■□□□□ 0.71
SEMA4D-224ENST00000544513 LRRC4BQ9NT99 713 aa19.49■□□□□ 0.71
SEMA4D-224ENST00000544513 ATF5Q9Y2D1 282 aaPredicted RBP19.49■□□□□ 0.71
SEMA4D-224ENST00000544513 MYOM1P52179 1685 aa19.49■□□□□ 0.71
SEMA4D-224ENST00000544513 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
SEMA4D-224ENST00000544513 USP47Q96K76 1375 aa19.48■□□□□ 0.71
SEMA4D-224ENST00000544513 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
SEMA4D-224ENST00000544513 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
SEMA4D-224ENST00000544513 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
SEMA4D-224ENST00000544513 YY1P25490 414 aa19.47■□□□□ 0.71
SEMA4D-224ENST00000544513 AMPHP49418 695 aa19.47■□□□□ 0.71
SEMA4D-224ENST00000544513 TMF1P82094 1093 aa19.47■□□□□ 0.71
SEMA4D-224ENST00000544513 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
SEMA4D-224ENST00000544513 SLC27A3Q5K4L6 730 aa19.45■□□□□ 0.7
SEMA4D-224ENST00000544513 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 AKT1S1Q96B36 256 aa19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 GGNBP2Q9H3C7 697 aa19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 MEGF6O75095 1541 aa19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 RGPD2P0DJD1 1756 aa19.44■□□□□ 0.7
SEMA4D-224ENST00000544513 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 PRIM1P49642 420 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms