RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 CHD4Q14839 1912 aa11.62□□□□□ -0.55
AL590560.1-203ENST00000544342 BCL9O00512 1426 aa11.61□□□□□ -0.55
AL590560.1-203ENST00000544342 USP6P35125 1406 aa11.61□□□□□ -0.55
AL590560.1-203ENST00000544342 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
AL590560.1-203ENST00000544342 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
AL590560.1-203ENST00000544342 COL18A1P39060 1754 aa11.6□□□□□ -0.55
AL590560.1-203ENST00000544342 KCNH5Q8NCM2 988 aa11.6□□□□□ -0.55
AL590560.1-203ENST00000544342 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 STK32BQ9NY57 414 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 TRPM1Q7Z4N2 1603 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
AL590560.1-203ENST00000544342 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
AL590560.1-203ENST00000544342 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
AL590560.1-203ENST00000544342 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
AL590560.1-203ENST00000544342 ABCC6O95255 1503 aa11.58□□□□□ -0.56
AL590560.1-203ENST00000544342 MYOM1P52179 1685 aa11.57□□□□□ -0.56
AL590560.1-203ENST00000544342 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
AL590560.1-203ENST00000544342 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
AL590560.1-203ENST00000544342 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
AL590560.1-203ENST00000544342 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
AL590560.1-203ENST00000544342 EXOC5O00471 708 aa11.56□□□□□ -0.56
AL590560.1-203ENST00000544342 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
AL590560.1-203ENST00000544342 ZBTB7AO95365 584 aa11.55□□□□□ -0.56
AL590560.1-203ENST00000544342 TXNRD1Q16881 649 aa11.55□□□□□ -0.56
AL590560.1-203ENST00000544342 ARHGEF25Q86VW2 580 aa11.55□□□□□ -0.56
AL590560.1-203ENST00000544342 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
AL590560.1-203ENST00000544342 NHSQ6T4R5 1651 aa11.55□□□□□ -0.56
AL590560.1-203ENST00000544342 SLC15A2Q16348 729 aa11.54□□□□□ -0.56
AL590560.1-203ENST00000544342 MTFR1LQ9H019 292 aa11.54□□□□□ -0.56
AL590560.1-203ENST00000544342 TNS2Q63HR2 1409 aa11.53□□□□□ -0.56
AL590560.1-203ENST00000544342 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
AL590560.1-203ENST00000544342 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
AL590560.1-203ENST00000544342 UTRNP46939 3433 aa11.52□□□□□ -0.57
AL590560.1-203ENST00000544342 PTGER2P43116 358 aa11.52□□□□□ -0.57
AL590560.1-203ENST00000544342 PROM2Q8N271 834 aa11.52□□□□□ -0.57
AL590560.1-203ENST00000544342 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
AL590560.1-203ENST00000544342 LTN1O94822 1766 aa11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 NFAT5O94916 1531 aa11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 SOX12O15370 315 aa11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 MON2Q7Z3U7 1717 aa11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
AL590560.1-203ENST00000544342 USP54Q70EL1 1684 aa11.5□□□□□ -0.57
AL590560.1-203ENST00000544342 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
AL590560.1-203ENST00000544342 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
AL590560.1-203ENST00000544342 BTAF1O14981 1849 aa11.5□□□□□ -0.57
AL590560.1-203ENST00000544342 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
AL590560.1-203ENST00000544342 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
AL590560.1-203ENST00000544342 ARXQ96QS3 562 aa11.49□□□□□ -0.57
AL590560.1-203ENST00000544342 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
AL590560.1-203ENST00000544342 IL2RBP14784 551 aa11.48□□□□□ -0.57
AL590560.1-203ENST00000544342 NLRP2Q9NX02 1062 aa11.48□□□□□ -0.57
AL590560.1-203ENST00000544342 PAPPAQ13219 1627 aa11.48□□□□□ -0.57
AL590560.1-203ENST00000544342 FAM208AQ9UK61 1670 aaKnown RBP11.48□□□□□ -0.57
AL590560.1-203ENST00000544342 ERBB3P21860 1342 aa11.47□□□□□ -0.57
AL590560.1-203ENST00000544342 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
AL590560.1-203ENST00000544342 USP31Q70CQ4 1352 aa11.46□□□□□ -0.57
AL590560.1-203ENST00000544342 POLD1P28340 1107 aa11.46□□□□□ -0.57
AL590560.1-203ENST00000544342 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
AL590560.1-203ENST00000544342 ACSBG1Q96GR2 724 aa11.46□□□□□ -0.57
AL590560.1-203ENST00000544342 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
AL590560.1-203ENST00000544342 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
AL590560.1-203ENST00000544342 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
AL590560.1-203ENST00000544342 GPR162Q16538 588 aa11.45□□□□□ -0.58
AL590560.1-203ENST00000544342 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
AL590560.1-203ENST00000544342 HDGFL2Q7Z4V5 671 aaPredicted RBP11.45□□□□□ -0.58
AL590560.1-203ENST00000544342 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
AL590560.1-203ENST00000544342 C1QTNF8P60827 252 aa11.44□□□□□ -0.58
AL590560.1-203ENST00000544342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
AL590560.1-203ENST00000544342 ANKRD24Q8TF21 1146 aa11.43□□□□□ -0.58
AL590560.1-203ENST00000544342 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
AL590560.1-203ENST00000544342 EDC4Q6P2E9 1401 aaKnown RBP11.43□□□□□ -0.58
AL590560.1-203ENST00000544342 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
AL590560.1-203ENST00000544342 GOLGB1Q14789 3259 aaKnown RBP11.41□□□□□ -0.58
AL590560.1-203ENST00000544342 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
AL590560.1-203ENST00000544342 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
AL590560.1-203ENST00000544342 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
AL590560.1-203ENST00000544342 TFCP2L1Q9NZI6 479 aa11.41□□□□□ -0.58
AL590560.1-203ENST00000544342 LY75O60449 1722 aa11.4□□□□□ -0.58
AL590560.1-203ENST00000544342 TUBGCP6Q96RT7 1819 aa11.4□□□□□ -0.58
AL590560.1-203ENST00000544342 ZNF827Q17R98 1081 aa11.4□□□□□ -0.58
AL590560.1-203ENST00000544342 NME9Q86XW9 330 aa11.4□□□□□ -0.58
AL590560.1-203ENST00000544342 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
AL590560.1-203ENST00000544342 DDX54Q8TDD1 881 aaKnown RBP11.39□□□□□ -0.59
AL590560.1-203ENST00000544342 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
AL590560.1-203ENST00000544342 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
AL590560.1-203ENST00000544342 LRRC4BQ9NT99 713 aa11.39□□□□□ -0.59
AL590560.1-203ENST00000544342 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 IP6K1Q92551 441 aa11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 SYTL4Q96C24 671 aaPredicted RBP11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
AL590560.1-203ENST00000544342 PNPLA7Q6ZV29 1317 aa11.37□□□□□ -0.59
AL590560.1-203ENST00000544342 NEUROD1Q13562 356 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms