RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 KCNH5Q8NCM2 988 aa39.14■■■■□ 3.86
PDCD2-211ENST00000544336 CARD11Q9BXL7 1154 aa39.14■■■■□ 3.86
PDCD2-211ENST00000544336 MON2Q7Z3U7 1717 aa39.14■■■■□ 3.86
PDCD2-211ENST00000544336 WDR17Q8IZU2 1322 aa39.13■■■■□ 3.85
PDCD2-211ENST00000544336 PEAK1Q9H792 1746 aa39.12■■■■□ 3.85
PDCD2-211ENST00000544336 OVOS2A0A0G2JMS6 1433 aa39.12■■■■□ 3.85
PDCD2-211ENST00000544336 OVOS2A0A0J9YW53 1432 aa39.12■■■■□ 3.85
PDCD2-211ENST00000544336 OVOS2Q6IE36 1432 aa39.12■■■■□ 3.85
PDCD2-211ENST00000544336 DDB1Q16531 1140 aa39.11■■■■□ 3.85
PDCD2-211ENST00000544336 CSB-PGBD3P0DP91 1061 aa39.09■■■■□ 3.85
PDCD2-211ENST00000544336 NFAT5O94916 1531 aa39.09■■■■□ 3.85
PDCD2-211ENST00000544336 SBF2Q86WG5 1849 aa39.08■■■■□ 3.85
PDCD2-211ENST00000544336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.08■■■■□ 3.85
PDCD2-211ENST00000544336 SBNO2Q9Y2G9 1366 aa39.08■■■■□ 3.85
PDCD2-211ENST00000544336 TONSLQ96HA7 1378 aa39.07■■■■□ 3.84
PDCD2-211ENST00000544336 C11orf95C9JLR9 678 aaPredicted RBP39.05■■■■□ 3.84
PDCD2-211ENST00000544336 TMC1Q8TDI8 760 aa39.05■■■■□ 3.84
PDCD2-211ENST00000544336 NBPF14Q5TI25 921 aa39.04■■■■□ 3.84
PDCD2-211ENST00000544336 CD163L1Q9NR16 1453 aa39■■■■□ 3.83
PDCD2-211ENST00000544336 NME9Q86XW9 330 aa38.99■■■■□ 3.83
PDCD2-211ENST00000544336 CARD10Q9BWT7 1032 aa38.99■■■■□ 3.83
PDCD2-211ENST00000544336 MARCH10Q8NA82 808 aaPredicted RBP38.98■■■■□ 3.83
PDCD2-211ENST00000544336 CDCA7Q9BWT1 371 aaPredicted RBP38.98■■■■□ 3.83
PDCD2-211ENST00000544336 USP54Q70EL1 1684 aa38.97■■■■□ 3.83
PDCD2-211ENST00000544336 PTF1AQ7RTS3 328 aa38.96■■■■□ 3.83
PDCD2-211ENST00000544336 SLC12A5Q9H2X9 1139 aa38.96■■■■□ 3.83
PDCD2-211ENST00000544336 LTN1O94822 1766 aa38.95■■■■□ 3.83
PDCD2-211ENST00000544336 HDGFL2Q7Z4V5 671 aaPredicted RBP38.95■■■■□ 3.83
PDCD2-211ENST00000544336 USP31Q70CQ4 1352 aa38.95■■■■□ 3.83
PDCD2-211ENST00000544336 ABCC6O95255 1503 aa38.94■■■■□ 3.82
PDCD2-211ENST00000544336 RGPD3A6NKT7 1758 aaPredicted RBP38.94■■■■□ 3.82
PDCD2-211ENST00000544336 RGPD4Q7Z3J3 1758 aa38.94■■■■□ 3.82
PDCD2-211ENST00000544336 BCL11BQ9C0K0 894 aaPredicted RBP38.92■■■■□ 3.82
PDCD2-211ENST00000544336 CCDC7Q96M83 1385 aa38.9■■■■□ 3.82
PDCD2-211ENST00000544336 EXOC5O00471 708 aa38.88■■■■□ 3.81
PDCD2-211ENST00000544336 PLSCR1O15162 318 aa38.88■■■■□ 3.81
PDCD2-211ENST00000544336 EDC4Q6P2E9 1401 aaKnown RBP38.88■■■■□ 3.81
PDCD2-211ENST00000544336 A0A1W2PP64 1363 aa38.87■■■■□ 3.81
PDCD2-211ENST00000544336 TERF2IPQ9NYB0 399 aa38.86■■■■□ 3.81
PDCD2-211ENST00000544336 NLRP2Q9NX02 1062 aa38.85■■■■□ 3.81
PDCD2-211ENST00000544336 BCL9O00512 1426 aa38.83■■■■□ 3.81
PDCD2-211ENST00000544336 ERBB3P21860 1342 aa38.83■■■■□ 3.81
PDCD2-211ENST00000544336 TNS2Q63HR2 1409 aa38.82■■■■□ 3.81
PDCD2-211ENST00000544336 ANO8Q9HCE9 1232 aaPredicted RBP38.81■■■■□ 3.8
PDCD2-211ENST00000544336 ST20-MTHFSA0A0A6YYL1 179 aa38.78■■■■□ 3.8
PDCD2-211ENST00000544336 ANKRD24Q8TF21 1146 aa38.78■■■■□ 3.8
PDCD2-211ENST00000544336 PROM2Q8N271 834 aa38.77■■■■□ 3.8
PDCD2-211ENST00000544336 PUS7Q96PZ0 661 aaKnown RBP38.77■■■■□ 3.8
PDCD2-211ENST00000544336 SPON1Q9HCB6 807 aa38.77■■■■□ 3.8
PDCD2-211ENST00000544336 KCNQ2O43526 872 aa38.76■■■■□ 3.8
PDCD2-211ENST00000544336 TESK2Q96S53 571 aa38.76■■■■□ 3.8
PDCD2-211ENST00000544336 PPP1R1BQ9UD71 204 aaPredicted RBP38.76■■■■□ 3.8
PDCD2-211ENST00000544336 IL2RBP14784 551 aa38.73■■■■□ 3.79
PDCD2-211ENST00000544336 NHSQ6T4R5 1651 aa38.72■■■■□ 3.79
PDCD2-211ENST00000544336 ACSBG1Q96GR2 724 aa38.72■■■■□ 3.79
PDCD2-211ENST00000544336 CASZ1Q86V15 1759 aa38.71■■■■□ 3.79
PDCD2-211ENST00000544336 TXNRD1Q16881 649 aa38.7■■■■□ 3.79
PDCD2-211ENST00000544336 NINLQ9Y2I6 1382 aa38.69■■■■□ 3.78
PDCD2-211ENST00000544336 LTV1Q96GA3 475 aaPredicted RBP38.68■■■■□ 3.78
PDCD2-211ENST00000544336 PDGFDQ9GZP0 370 aaPredicted RBP38.67■■■■□ 3.78
PDCD2-211ENST00000544336 IP6K1Q92551 441 aa38.65■■■■□ 3.78
PDCD2-211ENST00000544336 TRIM26Q12899 539 aaPredicted RBP38.64■■■■□ 3.78
PDCD2-211ENST00000544336 COG3Q96JB2 828 aa38.64■■■■□ 3.78
PDCD2-211ENST00000544336 STK32BQ9NY57 414 aa38.64■■■■□ 3.78
PDCD2-211ENST00000544336 KAT6BQ8WYB5 2073 aa38.64■■■■□ 3.78
PDCD2-211ENST00000544336 FAM208AQ9UK61 1670 aaKnown RBP38.62■■■■□ 3.77
PDCD2-211ENST00000544336 BTAF1O14981 1849 aa38.61■■■■□ 3.77
PDCD2-211ENST00000544336 ZBTB7AO95365 584 aa38.6■■■■□ 3.77
PDCD2-211ENST00000544336 FBLN1P23142 703 aa38.6■■■■□ 3.77
PDCD2-211ENST00000544336 SLC24A1O60721 1099 aa38.58■■■■□ 3.77
PDCD2-211ENST00000544336 MAP3K19Q56UN5 1328 aa38.58■■■■□ 3.77
PDCD2-211ENST00000544336 SLC15A2Q16348 729 aa38.57■■■■□ 3.76
PDCD2-211ENST00000544336 ANKRD36BQ8N2N9 1353 aa38.57■■■■□ 3.76
PDCD2-211ENST00000544336 AMPHP49418 695 aa38.56■■■■□ 3.76
PDCD2-211ENST00000544336 RGPD2P0DJD1 1756 aa38.56■■■■□ 3.76
PDCD2-211ENST00000544336 USP47Q96K76 1375 aa38.56■■■■□ 3.76
PDCD2-211ENST00000544336 HOXC9P31274 260 aa38.54■■■■□ 3.76
PDCD2-211ENST00000544336 DDX54Q8TDD1 881 aaKnown RBP38.54■■■■□ 3.76
PDCD2-211ENST00000544336 ATF5Q9Y2D1 282 aaPredicted RBP38.54■■■■□ 3.76
PDCD2-211ENST00000544336 TMF1P82094 1093 aa38.53■■■■□ 3.76
PDCD2-211ENST00000544336 MYOM1P52179 1685 aa38.52■■■■□ 3.76
PDCD2-211ENST00000544336 GGNBP2Q9H3C7 697 aa38.48■■■■□ 3.75
PDCD2-211ENST00000544336 PAPPAQ13219 1627 aa38.47■■■■□ 3.75
PDCD2-211ENST00000544336 RRS1Q15050 365 aaKnown RBP38.46■■■■□ 3.75
PDCD2-211ENST00000544336 DCAF8L1A6NGE4 600 aa38.45■■■■□ 3.75
PDCD2-211ENST00000544336 PTGER2P43116 358 aa38.45■■■■□ 3.75
PDCD2-211ENST00000544336 FYB1O15117 783 aa38.44■■■■□ 3.74
PDCD2-211ENST00000544336 KIF20BQ96Q89 1820 aa38.43■■■■□ 3.74
PDCD2-211ENST00000544336 YY1P25490 414 aa38.42■■■■□ 3.74
PDCD2-211ENST00000544336 DOT1LQ8TEK3 1739 aa38.42■■■■□ 3.74
PDCD2-211ENST00000544336 SHANK3Q9BYB0 1731 aa38.42■■■■□ 3.74
PDCD2-211ENST00000544336 SYTL4Q96C24 671 aaPredicted RBP38.41■■■■□ 3.74
PDCD2-211ENST00000544336 RTL1A6NKG5 1358 aa38.41■■■■□ 3.74
PDCD2-211ENST00000544336 MEGF6O75095 1541 aa38.4■■■■□ 3.74
PDCD2-211ENST00000544336 LRRC4BQ9NT99 713 aa38.4■■■■□ 3.74
PDCD2-211ENST00000544336 ZNF827Q17R98 1081 aa38.39■■■■□ 3.74
PDCD2-211ENST00000544336 MTFR1LQ9H019 292 aa38.39■■■■□ 3.74
PDCD2-211ENST00000544336 USHBP1Q8N6Y0 703 aa38.37■■■■□ 3.73
PDCD2-211ENST00000544336 ZCRB1Q8TBF4 217 aaKnown RBP38.37■■■■□ 3.73
PDCD2-211ENST00000544336 CDCA8Q53HL2 280 aa38.36■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms