RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
LDHB-210ENST00000544151 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
LDHB-210ENST00000544151 CRB1P82279 1406 aa21.98■■□□□ 1.11
LDHB-210ENST00000544151 TNS1Q9HBL0 1735 aaKnown RBP21.98■■□□□ 1.11
LDHB-210ENST00000544151 ABCC6O95255 1503 aa21.98■■□□□ 1.11
LDHB-210ENST00000544151 CCER1Q8TC90 406 aaPredicted RBP21.98■■□□□ 1.11
LDHB-210ENST00000544151 MYOM1P52179 1685 aa21.98■■□□□ 1.11
LDHB-210ENST00000544151 NME9Q86XW9 330 aa21.97■■□□□ 1.11
LDHB-210ENST00000544151 LRRC37A3O60309 1634 aa21.97■■□□□ 1.11
LDHB-210ENST00000544151 USP31Q70CQ4 1352 aa21.97■■□□□ 1.11
LDHB-210ENST00000544151 TMF1P82094 1093 aa21.96■■□□□ 1.11
LDHB-210ENST00000544151 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
LDHB-210ENST00000544151 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
LDHB-210ENST00000544151 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 ARHGEF25Q86VW2 580 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 TCP11L2Q8N4U5 519 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 OVOS2A0A0J9YW53 1432 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 OVOS2Q6IE36 1432 aa21.95■■□□□ 1.1
LDHB-210ENST00000544151 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
LDHB-210ENST00000544151 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
LDHB-210ENST00000544151 AXIN2Q9Y2T1 843 aa21.92■■□□□ 1.1
LDHB-210ENST00000544151 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
LDHB-210ENST00000544151 WDR17Q8IZU2 1322 aa21.91■■□□□ 1.1
LDHB-210ENST00000544151 TOM1L2Q6ZVM7 507 aa21.91■■□□□ 1.1
LDHB-210ENST00000544151 DEFB132Q7Z7B7 95 aa21.91■■□□□ 1.1
LDHB-210ENST00000544151 CSB-PGBD3P0DP91 1061 aa21.88■■□□□ 1.09
LDHB-210ENST00000544151 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
LDHB-210ENST00000544151 CDCA8Q53HL2 280 aa21.87■■□□□ 1.09
LDHB-210ENST00000544151 FAM208AQ9UK61 1670 aaKnown RBP21.86■■□□□ 1.09
LDHB-210ENST00000544151 BAG6P46379 1132 aa21.86■■□□□ 1.09
LDHB-210ENST00000544151 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
LDHB-210ENST00000544151 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
LDHB-210ENST00000544151 FAM196AQ6ZSG2 479 aa21.84■■□□□ 1.09
LDHB-210ENST00000544151 COG3Q96JB2 828 aa21.83■■□□□ 1.09
LDHB-210ENST00000544151 ERBB3P21860 1342 aa21.82■■□□□ 1.08
LDHB-210ENST00000544151 OVOS2A0A0G2JMS6 1433 aa21.82■■□□□ 1.08
LDHB-210ENST00000544151 DISP2A7MBM2 1401 aa21.82■■□□□ 1.08
LDHB-210ENST00000544151 TRIM37O94972 964 aa21.81■■□□□ 1.08
LDHB-210ENST00000544151 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
LDHB-210ENST00000544151 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
LDHB-210ENST00000544151 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
LDHB-210ENST00000544151 RREB1Q92766 1687 aa21.8■■□□□ 1.08
LDHB-210ENST00000544151 DDB1Q16531 1140 aa21.8■■□□□ 1.08
LDHB-210ENST00000544151 RGPD2P0DJD1 1756 aa21.79■■□□□ 1.08
LDHB-210ENST00000544151 EN1Q05925 392 aaPredicted RBP21.78■■□□□ 1.08
LDHB-210ENST00000544151 TNS2Q63HR2 1409 aa21.78■■□□□ 1.08
LDHB-210ENST00000544151 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
LDHB-210ENST00000544151 ANKRD24Q8TF21 1146 aa21.77■■□□□ 1.08
LDHB-210ENST00000544151 CDCA7Q9BWT1 371 aaPredicted RBP21.77■■□□□ 1.08
LDHB-210ENST00000544151 EIF4G2P78344 907 aaKnown RBP eCLIP21.76■■□□□ 1.07
LDHB-210ENST00000544151 NUP188Q5SRE5 1749 aa21.76■■□□□ 1.07
LDHB-210ENST00000544151 POLR3GLQ9BT43 218 aa21.76■■□□□ 1.07
LDHB-210ENST00000544151 GGNBP2Q9H3C7 697 aa21.76■■□□□ 1.07
LDHB-210ENST00000544151 RGPD3A6NKT7 1758 aaPredicted RBP21.75■■□□□ 1.07
LDHB-210ENST00000544151 RGPD4Q7Z3J3 1758 aa21.75■■□□□ 1.07
LDHB-210ENST00000544151 NLRP2Q9NX02 1062 aa21.75■■□□□ 1.07
LDHB-210ENST00000544151 MAP3K19Q56UN5 1328 aa21.75■■□□□ 1.07
LDHB-210ENST00000544151 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
LDHB-210ENST00000544151 ANKRD26Q9UPS8 1709 aa21.74■■□□□ 1.07
LDHB-210ENST00000544151 FYB1O15117 783 aa21.73■■□□□ 1.07
LDHB-210ENST00000544151 APBA3O96018 575 aa21.73■■□□□ 1.07
LDHB-210ENST00000544151 IP6K1Q92551 441 aa21.73■■□□□ 1.07
LDHB-210ENST00000544151 RTL1A6NKG5 1358 aa21.73■■□□□ 1.07
LDHB-210ENST00000544151 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
LDHB-210ENST00000544151 FBLN1P23142 703 aa21.72■■□□□ 1.07
LDHB-210ENST00000544151 EZH2Q15910 746 aaKnown RBP21.72■■□□□ 1.07
LDHB-210ENST00000544151 HOXC9P31274 260 aa21.71■■□□□ 1.07
LDHB-210ENST00000544151 AMPHP49418 695 aa21.71■■□□□ 1.07
LDHB-210ENST00000544151 LTV1Q96GA3 475 aaPredicted RBP21.71■■□□□ 1.07
LDHB-210ENST00000544151 PARD3Q8TEW0 1356 aa21.71■■□□□ 1.07
LDHB-210ENST00000544151 RRS1Q15050 365 aaKnown RBP21.7■■□□□ 1.06
LDHB-210ENST00000544151 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
LDHB-210ENST00000544151 SRCAPQ6ZRS2 3230 aa21.69■■□□□ 1.06
LDHB-210ENST00000544151 MARCH10Q8NA82 808 aaPredicted RBP21.69■■□□□ 1.06
LDHB-210ENST00000544151 CARD14Q9BXL6 1004 aa21.69■■□□□ 1.06
LDHB-210ENST00000544151 EXOC5O00471 708 aa21.68■■□□□ 1.06
LDHB-210ENST00000544151 IL2RBP14784 551 aa21.68■■□□□ 1.06
LDHB-210ENST00000544151 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
LDHB-210ENST00000544151 BCL9O00512 1426 aa21.68■■□□□ 1.06
LDHB-210ENST00000544151 MAP2P11137 1827 aaKnown RBP21.67■■□□□ 1.06
LDHB-210ENST00000544151 SHANK3Q9BYB0 1731 aa21.67■■□□□ 1.06
LDHB-210ENST00000544151 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
LDHB-210ENST00000544151 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
LDHB-210ENST00000544151 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
LDHB-210ENST00000544151 KAT6BQ8WYB5 2073 aa21.66■■□□□ 1.06
LDHB-210ENST00000544151 LRP5O75197 1615 aa21.66■■□□□ 1.06
LDHB-210ENST00000544151 FLT4P35916 1363 aa21.64■■□□□ 1.06
LDHB-210ENST00000544151 CGNL1Q0VF96 1302 aa21.64■■□□□ 1.05
LDHB-210ENST00000544151 BTAF1O14981 1849 aa21.62■■□□□ 1.05
LDHB-210ENST00000544151 DOT1LQ8TEK3 1739 aa21.62■■□□□ 1.05
LDHB-210ENST00000544151 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
LDHB-210ENST00000544151 MEGF6O75095 1541 aa21.61■■□□□ 1.05
LDHB-210ENST00000544151 R3HDM1Q15032 1099 aaKnown RBP21.61■■□□□ 1.05
LDHB-210ENST00000544151 BCL11BQ9C0K0 894 aaPredicted RBP21.61■■□□□ 1.05
LDHB-210ENST00000544151 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
LDHB-210ENST00000544151 CNKSR2Q8WXI2 1034 aa21.6■■□□□ 1.05
LDHB-210ENST00000544151 INSRP06213 1382 aa21.6■■□□□ 1.05
LDHB-210ENST00000544151 EMILIN1Q9Y6C2 1016 aa21.59■■□□□ 1.05
LDHB-210ENST00000544151 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms