RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 IP6K1Q92551 441 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 POLKQ9UBT6 870 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 CAMTA1Q9Y6Y1 1673 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 PEAK1Q9H792 1746 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 ABCC6O95255 1503 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 HOXC9P31274 260 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
TNFRSF1A-216ENST00000543995 RTL1A6NKG5 1358 aa19.6■□□□□ 0.73
TNFRSF1A-216ENST00000543995 FLT4P35916 1363 aa19.6■□□□□ 0.73
TNFRSF1A-216ENST00000543995 ZNF772Q68DY9 489 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-216ENST00000543995 UNC5CLQ8IV45 518 aa19.6■□□□□ 0.73
TNFRSF1A-216ENST00000543995 NRAPQ86VF7 1730 aa19.6■□□□□ 0.73
TNFRSF1A-216ENST00000543995 KIF24Q5T7B8 1368 aa19.59■□□□□ 0.73
TNFRSF1A-216ENST00000543995 PARD3Q8TEW0 1356 aa19.59■□□□□ 0.73
TNFRSF1A-216ENST00000543995 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.59■□□□□ 0.73
TNFRSF1A-216ENST00000543995 RALBP1Q15311 655 aa19.59■□□□□ 0.73
TNFRSF1A-216ENST00000543995 BCL9LQ86UU0 1499 aa19.59■□□□□ 0.73
TNFRSF1A-216ENST00000543995 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1A-216ENST00000543995 COL5A2P05997 1499 aaPredicted RBP19.58■□□□□ 0.72
TNFRSF1A-216ENST00000543995 CSB-PGBD3P0DP91 1061 aa19.57■□□□□ 0.72
TNFRSF1A-216ENST00000543995 MTHFSP49914 203 aa19.57■□□□□ 0.72
TNFRSF1A-216ENST00000543995 LTV1Q96GA3 475 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1A-216ENST00000543995 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1A-216ENST00000543995 PPP2R1AP30153 589 aa19.56■□□□□ 0.72
TNFRSF1A-216ENST00000543995 HSP90AB2PQ58FF8 381 aa19.56■□□□□ 0.72
TNFRSF1A-216ENST00000543995 SMG6Q86US8 1419 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-216ENST00000543995 ANKRD24Q8TF21 1146 aa19.56■□□□□ 0.72
TNFRSF1A-216ENST00000543995 TRPC5Q9UL62 973 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-216ENST00000543995 ANP32CO43423 234 aa19.55■□□□□ 0.72
TNFRSF1A-216ENST00000543995 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-216ENST00000543995 QTRT2Q9H974 415 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-216ENST00000543995 INSRP06213 1382 aa19.54■□□□□ 0.72
TNFRSF1A-216ENST00000543995 CDK12Q9NYV4 1490 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1A-216ENST00000543995 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1A-216ENST00000543995 ERBB3P21860 1342 aa19.53■□□□□ 0.72
TNFRSF1A-216ENST00000543995 VPS72Q15906 364 aa19.53■□□□□ 0.72
TNFRSF1A-216ENST00000543995 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-216ENST00000543995 TOM1L2Q6ZVM7 507 aa19.53■□□□□ 0.72
TNFRSF1A-216ENST00000543995 WDR17Q8IZU2 1322 aa19.53■□□□□ 0.72
TNFRSF1A-216ENST00000543995 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.71
TNFRSF1A-216ENST00000543995 ATRNO75882 1429 aa19.52■□□□□ 0.71
TNFRSF1A-216ENST00000543995 USP35Q9P2H5 1018 aa19.51■□□□□ 0.71
TNFRSF1A-216ENST00000543995 CRB1P82279 1406 aa19.51■□□□□ 0.71
TNFRSF1A-216ENST00000543995 FAM208AQ9UK61 1670 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-216ENST00000543995 CFAP53Q96M91 514 aa19.51■□□□□ 0.71
TNFRSF1A-216ENST00000543995 RGPD2P0DJD1 1756 aa19.5■□□□□ 0.71
TNFRSF1A-216ENST00000543995 GJD4Q96KN9 370 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1A-216ENST00000543995 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
TNFRSF1A-216ENST00000543995 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1A-216ENST00000543995 POTEAQ6S8J7 498 aa19.49■□□□□ 0.71
TNFRSF1A-216ENST00000543995 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
TNFRSF1A-216ENST00000543995 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
TNFRSF1A-216ENST00000543995 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1A-216ENST00000543995 SPATA31A1Q5TZJ5 1347 aa19.48■□□□□ 0.71
TNFRSF1A-216ENST00000543995 RBM6P78332 1123 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-216ENST00000543995 CARD10Q9BWT7 1032 aa19.46■□□□□ 0.71
TNFRSF1A-216ENST00000543995 DIAPH1O60610 1272 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-216ENST00000543995 RXRBP28702 533 aa19.46■□□□□ 0.71
TNFRSF1A-216ENST00000543995 GLI3P10071 1580 aa19.45■□□□□ 0.7
TNFRSF1A-216ENST00000543995 TCP11L2Q8N4U5 519 aa19.45■□□□□ 0.7
TNFRSF1A-216ENST00000543995 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
TNFRSF1A-216ENST00000543995 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
TNFRSF1A-216ENST00000543995 THRAP3Q9Y2W1 955 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-216ENST00000543995 A0A0G2JS52 829 aa19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 IL13P35225 146 aa19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 MYT1Q01538 1121 aa19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-216ENST00000543995 EYA1Q99502 592 aa19.42■□□□□ 0.7
TNFRSF1A-216ENST00000543995 NUDCQ9Y266 331 aa19.41■□□□□ 0.7
TNFRSF1A-216ENST00000543995 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-216ENST00000543995 BARGINQ6ZT62 677 aa19.41■□□□□ 0.7
TNFRSF1A-216ENST00000543995 WNK3Q9BYP7 1800 aa19.4■□□□□ 0.7
TNFRSF1A-216ENST00000543995 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.69
TNFRSF1A-216ENST00000543995 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
TNFRSF1A-216ENST00000543995 IL2RBP14784 551 aa19.37■□□□□ 0.69
TNFRSF1A-216ENST00000543995 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
TNFRSF1A-216ENST00000543995 CDCA7Q9BWT1 371 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-216ENST00000543995 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
TNFRSF1A-216ENST00000543995 HMOX1P09601 288 aa19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 THSD7AQ9UPZ6 1657 aa19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 PARP4Q9UKK3 1724 aaKnown RBP19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 ONECUT3O60422 494 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 AEBP1Q8IUX7 1158 aa19.35■□□□□ 0.69
TNFRSF1A-216ENST00000543995 RGS12O14924 1447 aa19.34■□□□□ 0.69
TNFRSF1A-216ENST00000543995 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
TNFRSF1A-216ENST00000543995 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
TNFRSF1A-216ENST00000543995 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
TNFRSF1A-216ENST00000543995 MEGF6O75095 1541 aa19.33■□□□□ 0.68
TNFRSF1A-216ENST00000543995 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
TNFRSF1A-216ENST00000543995 DDB1Q16531 1140 aa19.32■□□□□ 0.68
TNFRSF1A-216ENST00000543995 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
TNFRSF1A-216ENST00000543995 BRWD3Q6RI45 1802 aa19.32■□□□□ 0.68
TNFRSF1A-216ENST00000543995 EXOC5O00471 708 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms